RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 ZNF318Q5VUA4 2279 aa14.01□□□□□ -0.17
RPAIN-216ENST00000575599 PI15O43692 258 aa14□□□□□ -0.17
RPAIN-216ENST00000575599 PRKCSHP14314 528 aaPredicted RBP14□□□□□ -0.17
RPAIN-216ENST00000575599 PDE6CP51160 858 aa14□□□□□ -0.17
RPAIN-216ENST00000575599 CLCN5P51795 746 aa14□□□□□ -0.17
RPAIN-216ENST00000575599 STARD6P59095 220 aa14□□□□□ -0.17
RPAIN-216ENST00000575599 MYL5Q02045 173 aa14□□□□□ -0.17
RPAIN-216ENST00000575599 ZNF268Q14587 947 aaPredicted RBP14□□□□□ -0.17
RPAIN-216ENST00000575599 UBXN2BQ14CS0 331 aa14□□□□□ -0.17
RPAIN-216ENST00000575599 MAN2A1Q16706 1144 aa14□□□□□ -0.17
RPAIN-216ENST00000575599 SGO2Q562F6 1265 aa14□□□□□ -0.17
RPAIN-216ENST00000575599 CC2D1AQ6P1N0 951 aaPredicted RBP14□□□□□ -0.17
RPAIN-216ENST00000575599 PDZD8Q8NEN9 1154 aa14□□□□□ -0.17
RPAIN-216ENST00000575599 RIN3Q8TB24 985 aa14□□□□□ -0.17
RPAIN-216ENST00000575599 DUSP16Q9BY84 665 aa14□□□□□ -0.17
RPAIN-216ENST00000575599 RBSNQ9H1K0 784 aa14□□□□□ -0.17
RPAIN-216ENST00000575599 FBXO44Q9H4M3 255 aa14□□□□□ -0.17
RPAIN-216ENST00000575599 CHORDC1Q9UHD1 332 aaPredicted RBP14□□□□□ -0.17
RPAIN-216ENST00000575599 PIAS3Q9Y6X2 628 aa14□□□□□ -0.17
RPAIN-216ENST00000575599 HELZP42694 1942 aaKnown RBP14□□□□□ -0.17
RPAIN-216ENST00000575599 KANSL1LA0AUZ9 987 aa13.99□□□□□ -0.17
RPAIN-216ENST00000575599 KCNJ18B7U540 433 aa13.99□□□□□ -0.17
RPAIN-216ENST00000575599 HHLA1C9JL84 531 aa13.99□□□□□ -0.17
RPAIN-216ENST00000575599 ARNTLO00327 626 aa13.99□□□□□ -0.17
RPAIN-216ENST00000575599 PES1O00541 588 aaKnown RBP13.99□□□□□ -0.17
RPAIN-216ENST00000575599 OAS1P00973 400 aaKnown RBP13.99□□□□□ -0.17
RPAIN-216ENST00000575599 ACO1P21399 889 aaKnown RBP13.99□□□□□ -0.17
RPAIN-216ENST00000575599 KPNA1P52294 538 aaPredicted RBP13.99□□□□□ -0.17
RPAIN-216ENST00000575599 GCNT1Q02742 428 aa13.99□□□□□ -0.17
RPAIN-216ENST00000575599 TNK2Q07912 1038 aa13.99□□□□□ -0.17
RPAIN-216ENST00000575599 KCNJ12Q14500 433 aa13.99□□□□□ -0.17
RPAIN-216ENST00000575599 MTF1Q14872 753 aa13.99□□□□□ -0.17
RPAIN-216ENST00000575599 ARHGAP17Q68EM7 881 aa13.99□□□□□ -0.17
RPAIN-216ENST00000575599 PHLDB3Q6NSJ2 640 aa13.99□□□□□ -0.17
RPAIN-216ENST00000575599 TRIM65Q6PJ69 517 aa13.99□□□□□ -0.17
RPAIN-216ENST00000575599 GBP6Q6ZN66 633 aa13.99□□□□□ -0.17
RPAIN-216ENST00000575599 PJA1Q8NG27 643 aa13.99□□□□□ -0.17
RPAIN-216ENST00000575599 SH3RF2Q8TEC5 729 aa13.99□□□□□ -0.17
RPAIN-216ENST00000575599 OVCA2Q8WZ82 227 aa13.99□□□□□ -0.17
RPAIN-216ENST00000575599 UBE2TQ9NPD8 197 aaPredicted RBP13.99□□□□□ -0.17
RPAIN-216ENST00000575599 TRPV5Q9NQA5 729 aa13.99□□□□□ -0.17
RPAIN-216ENST00000575599 SAMSN1Q9NSI8 373 aaKnown RBP13.99□□□□□ -0.17
RPAIN-216ENST00000575599 COMMD8Q9NX08 183 aa13.99□□□□□ -0.17
RPAIN-216ENST00000575599 SMPD4Q9NXE4 827 aa13.99□□□□□ -0.17
RPAIN-216ENST00000575599 GTSE1Q9NYZ3 720 aa13.99□□□□□ -0.17
RPAIN-216ENST00000575599 IL37Q9NZH6 218 aa13.99□□□□□ -0.17
RPAIN-216ENST00000575599 TSPAN16Q9UKR8 245 aa13.99□□□□□ -0.17
RPAIN-216ENST00000575599 NFE2L3Q9Y4A8 694 aa13.99□□□□□ -0.17
RPAIN-216ENST00000575599 KIF26AQ9ULI4 1882 aaPredicted RBP13.99□□□□□ -0.17
RPAIN-216ENST00000575599 CYP26A1O43174 497 aa13.98□□□□□ -0.17
RPAIN-216ENST00000575599 DCNP07585 359 aaKnown RBP13.98□□□□□ -0.17
RPAIN-216ENST00000575599 MBL2P11226 248 aaPredicted RBP13.98□□□□□ -0.17
RPAIN-216ENST00000575599 VDRP11473 427 aa13.98□□□□□ -0.17
RPAIN-216ENST00000575599 KRT5P13647 590 aa13.98□□□□□ -0.17
RPAIN-216ENST00000575599 PFKLP17858 780 aa13.98□□□□□ -0.17
RPAIN-216ENST00000575599 SLC9A1P19634 815 aa13.98□□□□□ -0.17
RPAIN-216ENST00000575599 SOX9P48436 509 aa13.98□□□□□ -0.17
RPAIN-216ENST00000575599 SLC8A3P57103 927 aa13.98□□□□□ -0.17
RPAIN-216ENST00000575599 APBA1Q02410 837 aa13.98□□□□□ -0.17
RPAIN-216ENST00000575599 USP4Q13107 963 aa13.98□□□□□ -0.17
RPAIN-216ENST00000575599 ZNF77Q15935 545 aa13.98□□□□□ -0.17
RPAIN-216ENST00000575599 EXOC3L4Q17RC7 722 aa13.98□□□□□ -0.17
RPAIN-216ENST00000575599 TRIM68Q6AZZ1 485 aa13.98□□□□□ -0.17
RPAIN-216ENST00000575599 GJB7Q6PEY0 223 aa13.98□□□□□ -0.17
RPAIN-216ENST00000575599 LUZP1Q86V48 1076 aa13.98□□□□□ -0.17
RPAIN-216ENST00000575599 TTC30AQ86WT1 665 aa13.98□□□□□ -0.17
RPAIN-216ENST00000575599 ANKRD52Q8NB46 1076 aa13.98□□□□□ -0.17
RPAIN-216ENST00000575599 RBBP8NLQ8NC74 664 aaPredicted RBP13.98□□□□□ -0.17
RPAIN-216ENST00000575599 ENOX1Q8TC92 643 aaKnown RBP13.98□□□□□ -0.17
RPAIN-216ENST00000575599 KREMEN1Q96MU8 473 aa13.98□□□□□ -0.17
RPAIN-216ENST00000575599 TUBGCP2Q9BSJ2 902 aa13.98□□□□□ -0.17
RPAIN-216ENST00000575599 DDX23Q9BUQ8 820 aaKnown RBP13.98□□□□□ -0.17
RPAIN-216ENST00000575599 NACA2Q9H009 215 aa13.98□□□□□ -0.17
RPAIN-216ENST00000575599 RNF38Q9H0F5 515 aa13.98□□□□□ -0.17
RPAIN-216ENST00000575599 CCSER2Q9H7U1 834 aa13.98□□□□□ -0.17
RPAIN-216ENST00000575599 PNPLA8Q9NP80 782 aa13.98□□□□□ -0.17
RPAIN-216ENST00000575599 LTB4R2Q9NPC1 389 aa13.98□□□□□ -0.17
RPAIN-216ENST00000575599 GKN1Q9NS71 199 aa13.98□□□□□ -0.17
RPAIN-216ENST00000575599 HESX1Q9UBX0 185 aa13.98□□□□□ -0.17
RPAIN-216ENST00000575599 NDRG2Q9UN36 371 aaKnown RBP13.98□□□□□ -0.17
RPAIN-216ENST00000575599 ARHGAP26Q9UNA1 814 aa13.98□□□□□ -0.17
RPAIN-216ENST00000575599 SIT1Q9Y3P8 196 aa13.98□□□□□ -0.17
RPAIN-216ENST00000575599 CPQQ9Y646 472 aa13.98□□□□□ -0.17
RPAIN-216ENST00000575599 FAM92AA1XBS5 289 aa13.97□□□□□ -0.17
RPAIN-216ENST00000575599 RNF225M0QZC1 329 aaPredicted RBP13.97□□□□□ -0.17
RPAIN-216ENST00000575599 COCHO43405 550 aa13.97□□□□□ -0.17
RPAIN-216ENST00000575599 OLFM2O95897 454 aa13.97□□□□□ -0.17
RPAIN-216ENST00000575599 CALCAP01258 141 aa13.97□□□□□ -0.17
RPAIN-216ENST00000575599 PAEPP09466 180 aa13.97□□□□□ -0.17
RPAIN-216ENST00000575599 CDK11BP21127 795 aaKnown RBP13.97□□□□□ -0.17
RPAIN-216ENST00000575599 BRD2P25440 801 aaKnown RBP13.97□□□□□ -0.17
RPAIN-216ENST00000575599 PGFP49763 221 aa13.97□□□□□ -0.17
RPAIN-216ENST00000575599 BCAT1P54687 386 aa13.97□□□□□ -0.17
RPAIN-216ENST00000575599 VWA3BQ502W6 1294 aa13.97□□□□□ -0.17
RPAIN-216ENST00000575599 HECTD3Q5T447 861 aa13.97□□□□□ -0.17
RPAIN-216ENST00000575599 ZNF852Q6ZMS4 543 aa13.97□□□□□ -0.17
RPAIN-216ENST00000575599 PIGZQ86VD9 579 aa13.97□□□□□ -0.17
RPAIN-216ENST00000575599 CCDC105Q8IYK2 499 aa13.97□□□□□ -0.17
RPAIN-216ENST00000575599 PRSS33Q8NF86 280 aa13.97□□□□□ -0.17
RPAIN-216ENST00000575599 UBA3Q8TBC4 463 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms