RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 SYCP3Q8IZU3 236 aa9.59□□□□□ -0.87
SMG6-218ENST00000575454 TRIML1Q8N9V2 468 aa9.59□□□□□ -0.87
SMG6-218ENST00000575454 CXorf38Q8TB03 319 aa9.59□□□□□ -0.87
SMG6-218ENST00000575454 MYCBPAPQ8TBZ2 947 aa9.59□□□□□ -0.87
SMG6-218ENST00000575454 OVCA2Q8WZ82 227 aa9.59□□□□□ -0.87
SMG6-218ENST00000575454 ZNF419Q96HQ0 510 aaPredicted RBP9.59□□□□□ -0.87
SMG6-218ENST00000575454 HPDLQ96IR7 371 aa9.59□□□□□ -0.87
SMG6-218ENST00000575454 SCUBE2Q9NQ36 999 aa9.59□□□□□ -0.87
SMG6-218ENST00000575454 CALCOCO1Q9P1Z2 691 aa9.59□□□□□ -0.87
SMG6-218ENST00000575454 KIAA1522Q9P206 1035 aaPredicted RBP9.59□□□□□ -0.87
SMG6-218ENST00000575454 SH3BP1Q9Y3L3 701 aa9.59□□□□□ -0.87
SMG6-218ENST00000575454 NFE2L3Q9Y4A8 694 aa9.59□□□□□ -0.87
SMG6-218ENST00000575454 IGHV1OR15-9A0A0B4J2B8 117 aa9.58□□□□□ -0.88
SMG6-218ENST00000575454 F8VP50 259 aa9.58□□□□□ -0.88
SMG6-218ENST00000575454 ATP2C2O75185 946 aa9.58□□□□□ -0.88
SMG6-218ENST00000575454 TULP3O75386 442 aa9.58□□□□□ -0.88
SMG6-218ENST00000575454 PPP1R37O75864 691 aa9.58□□□□□ -0.88
SMG6-218ENST00000575454 RTN3O95197 1032 aaPredicted RBP9.58□□□□□ -0.88
SMG6-218ENST00000575454 PDGFRBP09619 1106 aa9.58□□□□□ -0.88
SMG6-218ENST00000575454 FTH1P19P0C7X4 201 aa9.58□□□□□ -0.88
SMG6-218ENST00000575454 HOXB2P14652 356 aa9.58□□□□□ -0.88
SMG6-218ENST00000575454 GABRG2P18507 467 aa9.58□□□□□ -0.88
SMG6-218ENST00000575454 WARSP23381 471 aaKnown RBP9.58□□□□□ -0.88
SMG6-218ENST00000575454 LMO2P25791 158 aa9.58□□□□□ -0.88
SMG6-218ENST00000575454 YWHAQP27348 245 aa9.58□□□□□ -0.88
SMG6-218ENST00000575454 GNL1P36915 607 aaPredicted RBP9.58□□□□□ -0.88
SMG6-218ENST00000575454 USP46P62068 366 aa9.58□□□□□ -0.88
SMG6-218ENST00000575454 PSMC1P62191 440 aaKnown RBP9.58□□□□□ -0.88
SMG6-218ENST00000575454 KDSRQ06136 332 aa9.58□□□□□ -0.88
SMG6-218ENST00000575454 MESP2Q0VG99 397 aa9.58□□□□□ -0.88
SMG6-218ENST00000575454 COL28A1Q2UY09 1125 aa9.58□□□□□ -0.88
SMG6-218ENST00000575454 C10orf76Q5T2E6 689 aa9.58□□□□□ -0.88
SMG6-218ENST00000575454 HECTD3Q5T447 861 aa9.58□□□□□ -0.88
SMG6-218ENST00000575454 GLRX5Q86SX6 157 aa9.58□□□□□ -0.88
SMG6-218ENST00000575454 C12orf40Q86WS4 652 aa9.58□□□□□ -0.88
SMG6-218ENST00000575454 SFR1Q86XK3 245 aa9.58□□□□□ -0.88
SMG6-218ENST00000575454 NAXDQ8IW45 347 aa9.58□□□□□ -0.88
SMG6-218ENST00000575454 SFTPA1Q8IWL2 248 aa9.58□□□□□ -0.88
SMG6-218ENST00000575454 ETFBKMTQ8IXQ9 262 aa9.58□□□□□ -0.88
SMG6-218ENST00000575454 RGL4Q8IZJ4 473 aa9.58□□□□□ -0.88
SMG6-218ENST00000575454 PHTF2Q8N3S3 785 aa9.58□□□□□ -0.88
SMG6-218ENST00000575454 KBTBD7Q8WVZ9 684 aa9.58□□□□□ -0.88
SMG6-218ENST00000575454 SAAL1Q96ER3 474 aa9.58□□□□□ -0.88
SMG6-218ENST00000575454 PCED1BQ96HM7 432 aa9.58□□□□□ -0.88
SMG6-218ENST00000575454 HSPA12BQ96MM6 686 aa9.58□□□□□ -0.88
SMG6-218ENST00000575454 MMS19Q96T76 1030 aa9.58□□□□□ -0.88
SMG6-218ENST00000575454 KIF2CQ99661 725 aa9.58□□□□□ -0.88
SMG6-218ENST00000575454 STRA6Q9BX79 667 aa9.58□□□□□ -0.88
SMG6-218ENST00000575454 MTMR12Q9C0I1 747 aa9.58□□□□□ -0.88
SMG6-218ENST00000575454 ELOVL4Q9GZR5 314 aa9.58□□□□□ -0.88
SMG6-218ENST00000575454 SNX25Q9H3E2 840 aa9.58□□□□□ -0.88
SMG6-218ENST00000575454 CRTAC1Q9NQ79 661 aa9.58□□□□□ -0.88
SMG6-218ENST00000575454 FSCN3Q9NQT6 498 aa9.58□□□□□ -0.88
SMG6-218ENST00000575454 DKK4Q9UBT3 224 aa9.58□□□□□ -0.88
SMG6-218ENST00000575454 CCDC39Q9UFE4 941 aa9.58□□□□□ -0.88
SMG6-218ENST00000575454 SIX4Q9UIU6 781 aa9.58□□□□□ -0.88
SMG6-218ENST00000575454 HECTD1Q9ULT8 2610 aa9.57□□□□□ -0.88
SMG6-218ENST00000575454 MYO18BQ8IUG5 2567 aa9.57□□□□□ -0.88
SMG6-218ENST00000575454 GREB1Q4ZG55 1949 aa9.57□□□□□ -0.88
SMG6-218ENST00000575454 A0A1W2PQF6 199 aa9.57□□□□□ -0.88
SMG6-218ENST00000575454 ANTXRLA6NF34 631 aa9.57□□□□□ -0.88
SMG6-218ENST00000575454 ZNF233A6NK53 670 aa9.57□□□□□ -0.88
SMG6-218ENST00000575454 GFRA2O00451 464 aa9.57□□□□□ -0.88
SMG6-218ENST00000575454 HCRTO43612 131 aa9.57□□□□□ -0.88
SMG6-218ENST00000575454 TACC1O75410 805 aa9.57□□□□□ -0.88
SMG6-218ENST00000575454 GJB3O75712 270 aa9.57□□□□□ -0.88
SMG6-218ENST00000575454 ZIC2O95409 532 aaPredicted RBP9.57□□□□□ -0.88
SMG6-218ENST00000575454 TUBP50607 506 aa9.57□□□□□ -0.88
SMG6-218ENST00000575454 CCDC142Q17RM4 750 aa9.57□□□□□ -0.88
SMG6-218ENST00000575454 ANO4Q32M45 955 aa9.57□□□□□ -0.88
SMG6-218ENST00000575454 GRAMD4Q6IC98 578 aa9.57□□□□□ -0.88
SMG6-218ENST00000575454 IL27RAQ6UWB1 636 aa9.57□□□□□ -0.88
SMG6-218ENST00000575454 TOGARAM2Q6ZUX3 1019 aa9.57□□□□□ -0.88
SMG6-218ENST00000575454 HS2ST1Q7LGA3 356 aa9.57□□□□□ -0.88
SMG6-218ENST00000575454 CHPFQ8IZ52 775 aa9.57□□□□□ -0.88
SMG6-218ENST00000575454 NUP93Q8N1F7 819 aa9.57□□□□□ -0.88
SMG6-218ENST00000575454 DEFB119Q8N690 84 aa9.57□□□□□ -0.88
SMG6-218ENST00000575454 TERB1Q8NA31 727 aa9.57□□□□□ -0.88
SMG6-218ENST00000575454 SCFD1Q8WVM8 642 aa9.57□□□□□ -0.88
SMG6-218ENST00000575454 XPO6Q96QU8 1125 aaKnown RBP9.57□□□□□ -0.88
SMG6-218ENST00000575454 CDC6Q99741 560 aa9.57□□□□□ -0.88
SMG6-218ENST00000575454 KIAA1586Q9HCI6 787 aa9.57□□□□□ -0.88
SMG6-218ENST00000575454 PDE11AQ9HCR9 933 aa9.57□□□□□ -0.88
SMG6-218ENST00000575454 SPHK2Q9NRA0 654 aa9.57□□□□□ -0.88
SMG6-218ENST00000575454 OLFML3Q9NRN5 406 aa9.57□□□□□ -0.88
SMG6-218ENST00000575454 INTS13Q9NVM9 706 aa9.57□□□□□ -0.88
SMG6-218ENST00000575454 WDR35Q9P2L0 1181 aa9.57□□□□□ -0.88
SMG6-218ENST00000575454 STK17AQ9UEE5 414 aa9.57□□□□□ -0.88
SMG6-218ENST00000575454 CYP8B1Q9UNU6 501 aa9.57□□□□□ -0.88
SMG6-218ENST00000575454 ATP8B3O60423 1300 aa9.56□□□□□ -0.88
SMG6-218ENST00000575454 CACNA1EQ15878 2313 aa9.56□□□□□ -0.88
SMG6-218ENST00000575454 A0A1B0GTW7 788 aa9.56□□□□□ -0.88
SMG6-218ENST00000575454 PRPF6O94906 941 aaKnown RBP9.56□□□□□ -0.88
SMG6-218ENST00000575454 GCNT3O95395 438 aa9.56□□□□□ -0.88
SMG6-218ENST00000575454 ZNF883P0CG24 379 aa9.56□□□□□ -0.88
SMG6-218ENST00000575454 PTPN1P18031 435 aaKnown RBP9.56□□□□□ -0.88
SMG6-218ENST00000575454 CD6P30203 668 aa9.56□□□□□ -0.88
SMG6-218ENST00000575454 ZNF132P52740 706 aa9.56□□□□□ -0.88
SMG6-218ENST00000575454 STARD3Q14849 445 aa9.56□□□□□ -0.88
SMG6-218ENST00000575454 SUZ12Q15022 739 aaKnown RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms