RNA–Protein interactions for RNA: ENST00000575431.1

CCDC40-214, Transcript of coiled-coil domain containing 40, humanhuman

TSL 3

Gene CCDC40, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-214ENST00000575431 ABL1P00519 1130 aa10.07□□□□□ -0.8
CCDC40-214ENST00000575431 CKMP06732 381 aa10.07□□□□□ -0.8
CCDC40-214ENST00000575431 RALAP11233 206 aa10.07□□□□□ -0.8
CCDC40-214ENST00000575431 CYP11B1P15538 503 aa10.07□□□□□ -0.8
CCDC40-214ENST00000575431 TCF3P15923 654 aa10.07□□□□□ -0.8
CCDC40-214ENST00000575431 FERP16591 822 aa10.07□□□□□ -0.8
CCDC40-214ENST00000575431 RPL34P49207 117 aaKnown RBP10.07□□□□□ -0.8
CCDC40-214ENST00000575431 KLK7P49862 253 aa10.07□□□□□ -0.8
CCDC40-214ENST00000575431 TKTL1P51854 596 aa10.07□□□□□ -0.8
CCDC40-214ENST00000575431 CYP4F8P98187 520 aa10.07□□□□□ -0.8
CCDC40-214ENST00000575431 HECTD3Q5T447 861 aa10.07□□□□□ -0.8
CCDC40-214ENST00000575431 PM20D1Q6GTS8 502 aa10.07□□□□□ -0.8
CCDC40-214ENST00000575431 KLHDC10Q6PID8 442 aa10.07□□□□□ -0.8
CCDC40-214ENST00000575431 PARM1Q6UWI2 310 aa10.07□□□□□ -0.8
CCDC40-214ENST00000575431 ARID3BQ8IVW6 561 aaPredicted RBP10.07□□□□□ -0.8
CCDC40-214ENST00000575431 SIX6OS1Q8N1H7 587 aa10.07□□□□□ -0.8
CCDC40-214ENST00000575431 SLC44A3Q8N4M1 653 aa10.07□□□□□ -0.8
CCDC40-214ENST00000575431 MAB21L3Q8N8X9 362 aa10.07□□□□□ -0.8
CCDC40-214ENST00000575431 TMEM35BQ8NCS4 154 aa10.07□□□□□ -0.8
CCDC40-214ENST00000575431 RNF214Q8ND24 703 aa10.07□□□□□ -0.8
CCDC40-214ENST00000575431 IRGQQ8WZA9 623 aa10.07□□□□□ -0.8
CCDC40-214ENST00000575431 SECISBP2LQ93073 1101 aaKnown RBP10.07□□□□□ -0.8
CCDC40-214ENST00000575431 ZSWIM1Q9BR11 485 aa10.07□□□□□ -0.8
CCDC40-214ENST00000575431 TRIM62Q9BVG3 475 aa10.07□□□□□ -0.8
CCDC40-214ENST00000575431 MIS12Q9H081 205 aa10.07□□□□□ -0.8
CCDC40-214ENST00000575431 CD320Q9NPF0 282 aa10.07□□□□□ -0.8
CCDC40-214ENST00000575431 TDP1Q9NUW8 608 aa10.07□□□□□ -0.8
CCDC40-214ENST00000575431 THG1LQ9NWX6 298 aaKnown RBP10.07□□□□□ -0.8
CCDC40-214ENST00000575431 IFNKQ9P0W0 207 aa10.07□□□□□ -0.8
CCDC40-214ENST00000575431 CHORDC1Q9UHD1 332 aaPredicted RBP10.07□□□□□ -0.8
CCDC40-214ENST00000575431 AJAP1Q9UKB5 411 aaPredicted RBP10.07□□□□□ -0.8
CCDC40-214ENST00000575431 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.07□□□□□ -0.8
CCDC40-214ENST00000575431 NUMBLQ9Y6R0 609 aa10.07□□□□□ -0.8
CCDC40-214ENST00000575431 DOCK6Q96HP0 2047 aa10.07□□□□□ -0.8
CCDC40-214ENST00000575431 ITIH6Q6UXX5 1313 aa10.07□□□□□ -0.8
CCDC40-214ENST00000575431 DOCK8Q8NF50 2099 aa10.06□□□□□ -0.8
CCDC40-214ENST00000575431 ZNF638Q14966 1978 aaKnown RBP10.06□□□□□ -0.8
CCDC40-214ENST00000575431 OBSL1O75147 1896 aa10.06□□□□□ -0.8
CCDC40-214ENST00000575431 NUP210Q8TEM1 1887 aaPredicted RBP10.06□□□□□ -0.8
CCDC40-214ENST00000575431 A0A1W2PQJ5 194 aa10.06□□□□□ -0.8
CCDC40-214ENST00000575431 EPHB6O15197 1021 aa10.06□□□□□ -0.8
CCDC40-214ENST00000575431 DCXO43602 365 aa10.06□□□□□ -0.8
CCDC40-214ENST00000575431 TADA3O75528 432 aa10.06□□□□□ -0.8
CCDC40-214ENST00000575431 LSM8O95777 96 aaKnown RBP10.06□□□□□ -0.8
CCDC40-214ENST00000575431 ZBED1O96006 694 aa10.06□□□□□ -0.8
CCDC40-214ENST00000575431 OAS1P00973 400 aaKnown RBP10.06□□□□□ -0.8
CCDC40-214ENST00000575431 SRFP11831 508 aa10.06□□□□□ -0.8
CCDC40-214ENST00000575431 PSMC3P17980 439 aa10.06□□□□□ -0.8
CCDC40-214ENST00000575431 SLC7A9P82251 487 aa10.06□□□□□ -0.8
CCDC40-214ENST00000575431 PFKPQ01813 784 aa10.06□□□□□ -0.8
CCDC40-214ENST00000575431 ARHGAP29Q52LW3 1261 aa10.06□□□□□ -0.8
CCDC40-214ENST00000575431 TXNDC8Q6A555 127 aa10.06□□□□□ -0.8
CCDC40-214ENST00000575431 TRIM72Q6ZMU5 477 aa10.06□□□□□ -0.8
CCDC40-214ENST00000575431 GPRIN1Q7Z2K8 1008 aa10.06□□□□□ -0.8
CCDC40-214ENST00000575431 TMEM110Q86TL2 294 aa10.06□□□□□ -0.8
CCDC40-214ENST00000575431 SLC47A2Q86VL8 602 aa10.06□□□□□ -0.8
CCDC40-214ENST00000575431 DDX42Q86XP3 938 aaKnown RBP eCLIP10.06□□□□□ -0.8
CCDC40-214ENST00000575431 MFSD6LQ8IWD5 586 aa10.06□□□□□ -0.8
CCDC40-214ENST00000575431 YAF2Q8IY57 180 aa10.06□□□□□ -0.8
CCDC40-214ENST00000575431 MSANTD4Q8NCY6 345 aa10.06□□□□□ -0.8
CCDC40-214ENST00000575431 ZNF397Q8NF99 534 aaPredicted RBP10.06□□□□□ -0.8
CCDC40-214ENST00000575431 BPIFB1Q8TDL5 484 aa10.06□□□□□ -0.8
CCDC40-214ENST00000575431 GOLGA1Q92805 767 aa10.06□□□□□ -0.8
CCDC40-214ENST00000575431 FGF14Q92915 247 aa10.06□□□□□ -0.8
CCDC40-214ENST00000575431 ZSWIM3Q96MP5 696 aa10.06□□□□□ -0.8
CCDC40-214ENST00000575431 TRMT61BQ9BVS5 477 aaKnown RBP10.06□□□□□ -0.8
CCDC40-214ENST00000575431 SLC4A5Q9BY07 1137 aa10.06□□□□□ -0.8
CCDC40-214ENST00000575431 XPO4Q9C0E2 1151 aaKnown RBP10.06□□□□□ -0.8
CCDC40-214ENST00000575431 NACA2Q9H009 215 aa10.06□□□□□ -0.8
CCDC40-214ENST00000575431 SLC2A4RGQ9NR83 387 aa10.06□□□□□ -0.8
CCDC40-214ENST00000575431 ARHGAP26Q9UNA1 814 aa10.06□□□□□ -0.8
CCDC40-214ENST00000575431 HEPACAM2A8MVW5 462 aa10.05□□□□□ -0.8
CCDC40-214ENST00000575431 PI4K2BG5E9Z4 385 aa10.05□□□□□ -0.8
CCDC40-214ENST00000575431 TLR5O60602 858 aa10.05□□□□□ -0.8
CCDC40-214ENST00000575431 GFPT2O94808 682 aa10.05□□□□□ -0.8
CCDC40-214ENST00000575431 ASGR2P07307 311 aa10.05□□□□□ -0.8
CCDC40-214ENST00000575431 FCARP24071 287 aa10.05□□□□□ -0.8
CCDC40-214ENST00000575431 CDH5P33151 784 aaPredicted RBP10.05□□□□□ -0.8
CCDC40-214ENST00000575431 ATP5C1P36542 298 aaKnown RBP10.05□□□□□ -0.8
CCDC40-214ENST00000575431 PBX1P40424 430 aa10.05□□□□□ -0.8
CCDC40-214ENST00000575431 PLCB2Q00722 1185 aa10.05□□□□□ -0.8
CCDC40-214ENST00000575431 CDR2Q01850 454 aa10.05□□□□□ -0.8
CCDC40-214ENST00000575431 GOLGA8FQ08AF8 430 aa10.05□□□□□ -0.8
CCDC40-214ENST00000575431 GOLGA8DPQ0D2H9 430 aa10.05□□□□□ -0.8
CCDC40-214ENST00000575431 FCHO2Q0JRZ9 810 aa10.05□□□□□ -0.8
CCDC40-214ENST00000575431 ADIGQ0VDE8 80 aa10.05□□□□□ -0.8
CCDC40-214ENST00000575431 TRIM14Q14142 442 aa10.05□□□□□ -0.8
CCDC40-214ENST00000575431 STXBP5Q5T5C0 1151 aa10.05□□□□□ -0.8
CCDC40-214ENST00000575431 BTBD8Q5XKL5 378 aa10.05□□□□□ -0.8
CCDC40-214ENST00000575431 TANGO2Q6ICL3 276 aa10.05□□□□□ -0.8
CCDC40-214ENST00000575431 PPP1R2P3Q6NXS1 205 aa10.05□□□□□ -0.8
CCDC40-214ENST00000575431 PMF1Q6P1K2 205 aa10.05□□□□□ -0.8
CCDC40-214ENST00000575431 CC2D1AQ6P1N0 951 aaPredicted RBP10.05□□□□□ -0.8
CCDC40-214ENST00000575431 DENND1BQ6P3S1 775 aa10.05□□□□□ -0.8
CCDC40-214ENST00000575431 SARM1Q6SZW1 724 aa10.05□□□□□ -0.8
CCDC40-214ENST00000575431 ZDHHC17Q8IUH5 632 aa10.05□□□□□ -0.8
CCDC40-214ENST00000575431 ARL14EPQ8N8R7 260 aaPredicted RBP10.05□□□□□ -0.8
CCDC40-214ENST00000575431 EPS8L1Q8TE68 723 aa10.05□□□□□ -0.8
CCDC40-214ENST00000575431 IPO4Q8TEX9 1081 aaKnown RBP10.05□□□□□ -0.8
CCDC40-214ENST00000575431 EDAQ92838 391 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms