RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 DDX23Q9BUQ8 820 aaKnown RBP21.85■■□□□ 1.09
HCFC1R1-208ENST00000575214 RNF38Q9H0F5 515 aa21.85■■□□□ 1.09
HCFC1R1-208ENST00000575214 GTSE1Q9NYZ3 720 aa21.85■■□□□ 1.09
HCFC1R1-208ENST00000575214 APEX2Q9UBZ4 518 aa21.85■■□□□ 1.09
HCFC1R1-208ENST00000575214 SCML2Q9UQR0 700 aa21.85■■□□□ 1.09
HCFC1R1-208ENST00000575214 SIT1Q9Y3P8 196 aa21.85■■□□□ 1.09
HCFC1R1-208ENST00000575214 CPQQ9Y646 472 aa21.85■■□□□ 1.09
HCFC1R1-208ENST00000575214 MYH10P35580 1976 aa21.84■■□□□ 1.09
HCFC1R1-208ENST00000575214 COL4A3Q01955 1670 aa21.84■■□□□ 1.09
HCFC1R1-208ENST00000575214 ZNF638Q14966 1978 aaKnown RBP21.84■■□□□ 1.09
HCFC1R1-208ENST00000575214 RNF225M0QZC1 329 aaPredicted RBP21.84■■□□□ 1.09
HCFC1R1-208ENST00000575214 O00370 1275 aa21.84■■□□□ 1.09
HCFC1R1-208ENST00000575214 OLFM2O95897 454 aa21.84■■□□□ 1.09
HCFC1R1-208ENST00000575214 ZDHHC11BP0C7U3 371 aa21.84■■□□□ 1.09
HCFC1R1-208ENST00000575214 PON1P27169 355 aa21.84■■□□□ 1.09
HCFC1R1-208ENST00000575214 SLC7A9P82251 487 aa21.84■■□□□ 1.09
HCFC1R1-208ENST00000575214 APBA1Q02410 837 aa21.84■■□□□ 1.09
HCFC1R1-208ENST00000575214 TYRO3Q06418 890 aa21.84■■□□□ 1.09
HCFC1R1-208ENST00000575214 TNK2Q07912 1038 aa21.84■■□□□ 1.09
HCFC1R1-208ENST00000575214 BST2Q10589 180 aaKnown RBP21.84■■□□□ 1.09
HCFC1R1-208ENST00000575214 SNX30Q5VWJ9 437 aa21.84■■□□□ 1.09
HCFC1R1-208ENST00000575214 TRIM68Q6AZZ1 485 aa21.84■■□□□ 1.09
HCFC1R1-208ENST00000575214 GJB7Q6PEY0 223 aa21.84■■□□□ 1.09
HCFC1R1-208ENST00000575214 PIGZQ86VD9 579 aa21.84■■□□□ 1.09
HCFC1R1-208ENST00000575214 TFAP2BQ92481 460 aa21.84■■□□□ 1.09
HCFC1R1-208ENST00000575214 FAM81BQ96LP2 452 aa21.84■■□□□ 1.09
HCFC1R1-208ENST00000575214 NACA2Q9H009 215 aa21.84■■□□□ 1.09
HCFC1R1-208ENST00000575214 CCSER2Q9H7U1 834 aa21.84■■□□□ 1.09
HCFC1R1-208ENST00000575214 LTB4R2Q9NPC1 389 aa21.84■■□□□ 1.09
HCFC1R1-208ENST00000575214 SMPD4Q9NXE4 827 aa21.84■■□□□ 1.09
HCFC1R1-208ENST00000575214 MRPS17Q9Y2R5 130 aaKnown RBP21.84■■□□□ 1.09
HCFC1R1-208ENST00000575214 ANAPC1Q9H1A4 1944 aa21.83■■□□□ 1.09
HCFC1R1-208ENST00000575214 LEFTY2O00292 366 aa21.83■■□□□ 1.08
HCFC1R1-208ENST00000575214 MAN2B1O00754 1011 aa21.83■■□□□ 1.08
HCFC1R1-208ENST00000575214 COCHO43405 550 aa21.83■■□□□ 1.08
HCFC1R1-208ENST00000575214 DCNP07585 359 aaKnown RBP21.83■■□□□ 1.08
HCFC1R1-208ENST00000575214 BRD2P25440 801 aaKnown RBP21.83■■□□□ 1.08
HCFC1R1-208ENST00000575214 TUBP50607 506 aa21.83■■□□□ 1.08
HCFC1R1-208ENST00000575214 ZNF132P52740 706 aa21.83■■□□□ 1.08
HCFC1R1-208ENST00000575214 PDE4CQ08493 712 aa21.83■■□□□ 1.08
HCFC1R1-208ENST00000575214 ARHGAP44Q17R89 818 aa21.83■■□□□ 1.08
HCFC1R1-208ENST00000575214 UBA3Q8TBC4 463 aa21.83■■□□□ 1.08
HCFC1R1-208ENST00000575214 FAM83CQ9BQN1 747 aa21.83■■□□□ 1.08
HCFC1R1-208ENST00000575214 UBXN6Q9BZV1 441 aa21.83■■□□□ 1.08
HCFC1R1-208ENST00000575214 KCNH6Q9H252 994 aa21.83■■□□□ 1.08
HCFC1R1-208ENST00000575214 EBF3Q9H4W6 596 aa21.83■■□□□ 1.08
HCFC1R1-208ENST00000575214 C8orf33Q9H7E9 229 aaPredicted RBP21.83■■□□□ 1.08
HCFC1R1-208ENST00000575214 TAB2Q9NYJ8 693 aa21.83■■□□□ 1.08
HCFC1R1-208ENST00000575214 ZNF318Q5VUA4 2279 aa21.83■■□□□ 1.08
HCFC1R1-208ENST00000575214 KMT2EQ8IZD2 1858 aa21.82■■□□□ 1.08
HCFC1R1-208ENST00000575214 FAM170BA6NMN3 283 aa21.82■■□□□ 1.08
HCFC1R1-208ENST00000575214 XPO1O14980 1071 aaKnown RBP21.82■■□□□ 1.08
HCFC1R1-208ENST00000575214 TLR5O60602 858 aa21.82■■□□□ 1.08
HCFC1R1-208ENST00000575214 CALCAP01258 141 aa21.82■■□□□ 1.08
HCFC1R1-208ENST00000575214 GLULP15104 373 aa21.82■■□□□ 1.08
HCFC1R1-208ENST00000575214 TCF3P15923 654 aa21.82■■□□□ 1.08
HCFC1R1-208ENST00000575214 SOX9P48436 509 aa21.82■■□□□ 1.08
HCFC1R1-208ENST00000575214 IFNAR2P48551 515 aa21.82■■□□□ 1.08
HCFC1R1-208ENST00000575214 PGFP49763 221 aa21.82■■□□□ 1.08
HCFC1R1-208ENST00000575214 MYL5Q02045 173 aa21.82■■□□□ 1.08
HCFC1R1-208ENST00000575214 STILQ15468 1287 aa21.82■■□□□ 1.08
HCFC1R1-208ENST00000575214 ITPRIPL2Q3MIP1 535 aa21.82■■□□□ 1.08
HCFC1R1-208ENST00000575214 CDKAL1Q5VV42 579 aa21.82■■□□□ 1.08
HCFC1R1-208ENST00000575214 LCLAT1Q6UWP7 414 aa21.82■■□□□ 1.08
HCFC1R1-208ENST00000575214 CCDC186Q7Z3E2 898 aa21.82■■□□□ 1.08
HCFC1R1-208ENST00000575214 FAM3CQ92520 227 aa21.82■■□□□ 1.08
HCFC1R1-208ENST00000575214 PRRX2Q99811 253 aa21.82■■□□□ 1.08
HCFC1R1-208ENST00000575214 FANCLQ9NW38 375 aa21.82■■□□□ 1.08
HCFC1R1-208ENST00000575214 DUS2Q9NX74 493 aaKnown RBP21.82■■□□□ 1.08
HCFC1R1-208ENST00000575214 NDRG2Q9UN36 371 aaKnown RBP21.82■■□□□ 1.08
HCFC1R1-208ENST00000575214 MTF2Q9Y483 593 aaPredicted RBP21.82■■□□□ 1.08
HCFC1R1-208ENST00000575214 PATJQ8NI35 1801 aa21.82■■□□□ 1.08
HCFC1R1-208ENST00000575214 TICRRQ7Z2Z1 1910 aa21.82■■□□□ 1.08
HCFC1R1-208ENST00000575214 A0A1W2PQH9 124 aa21.81■■□□□ 1.08
HCFC1R1-208ENST00000575214 M0QYV0 167 aa21.81■■□□□ 1.08
HCFC1R1-208ENST00000575214 TULP2O00295 520 aa21.81■■□□□ 1.08
HCFC1R1-208ENST00000575214 TPM2P07951 284 aa21.81■■□□□ 1.08
HCFC1R1-208ENST00000575214 SETSIPP0DME0 302 aa21.81■■□□□ 1.08
HCFC1R1-208ENST00000575214 ARSAP15289 507 aa21.81■■□□□ 1.08
HCFC1R1-208ENST00000575214 TARSP26639 723 aaKnown RBP21.81■■□□□ 1.08
HCFC1R1-208ENST00000575214 NUBP1P53384 320 aa21.81■■□□□ 1.08
HCFC1R1-208ENST00000575214 ZXDBP98169 803 aa21.81■■□□□ 1.08
HCFC1R1-208ENST00000575214 RUNX3Q13761 415 aa21.81■■□□□ 1.08
HCFC1R1-208ENST00000575214 PDGFRLQ15198 375 aa21.81■■□□□ 1.08
HCFC1R1-208ENST00000575214 DDX42Q86XP3 938 aaKnown RBP eCLIP21.81■■□□□ 1.08
HCFC1R1-208ENST00000575214 CCDC105Q8IYK2 499 aa21.81■■□□□ 1.08
HCFC1R1-208ENST00000575214 OSCP1Q8WVF1 389 aa21.81■■□□□ 1.08
HCFC1R1-208ENST00000575214 MSANTD3Q96H12 275 aa21.81■■□□□ 1.08
HCFC1R1-208ENST00000575214 NELL2Q99435 816 aa21.81■■□□□ 1.08
HCFC1R1-208ENST00000575214 HPS4Q9NQG7 708 aa21.81■■□□□ 1.08
HCFC1R1-208ENST00000575214 NAGPAQ9UK23 515 aa21.81■■□□□ 1.08
HCFC1R1-208ENST00000575214 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.81■■□□□ 1.08
HCFC1R1-208ENST00000575214 CNTN6Q9UQ52 1028 aa21.81■■□□□ 1.08
HCFC1R1-208ENST00000575214 WNT6Q9Y6F9 365 aa21.81■■□□□ 1.08
HCFC1R1-208ENST00000575214 USP3Q9Y6I4 520 aa21.81■■□□□ 1.08
HCFC1R1-208ENST00000575214 COL4A2P08572 1712 aa21.81■■□□□ 1.08
HCFC1R1-208ENST00000575214 SHISA7A6NL88 538 aa21.8■■□□□ 1.08
HCFC1R1-208ENST00000575214 USP8P40818 1118 aa21.8■■□□□ 1.08
HCFC1R1-208ENST00000575214 TKTL1P51854 596 aa21.8■■□□□ 1.08
HCFC1R1-208ENST00000575214 MLLT6P55198 1093 aaPredicted RBP21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 444.5 ms