RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 ZFYVE19Q96K21 471 aa11.24□□□□□ -0.61
LITAF-216ENST00000574848 BAG1Q99933 345 aaPredicted RBP11.24□□□□□ -0.61
LITAF-216ENST00000574848 DUSP9Q99956 384 aaKnown RBP11.24□□□□□ -0.61
LITAF-216ENST00000574848 SMG9Q9H0W8 520 aaKnown RBP11.24□□□□□ -0.61
LITAF-216ENST00000574848 VPS16Q9H269 839 aa11.24□□□□□ -0.61
LITAF-216ENST00000574848 DPEP3Q9H4B8 488 aa11.24□□□□□ -0.61
LITAF-216ENST00000574848 TMEM30AQ9NV96 361 aa11.24□□□□□ -0.61
LITAF-216ENST00000574848 SPATA6Q9NWH7 488 aaPredicted RBP11.24□□□□□ -0.61
LITAF-216ENST00000574848 THG1LQ9NWX6 298 aaKnown RBP11.24□□□□□ -0.61
LITAF-216ENST00000574848 EHD2Q9NZN4 543 aa11.24□□□□□ -0.61
LITAF-216ENST00000574848 NXF1Q9UBU9 619 aaKnown RBP11.24□□□□□ -0.61
LITAF-216ENST00000574848 CFAP54Q96N23 3096 aa11.23□□□□□ -0.61
LITAF-216ENST00000574848 A8MXQ7 604 aa11.23□□□□□ -0.61
LITAF-216ENST00000574848 F8VP50 259 aa11.23□□□□□ -0.61
LITAF-216ENST00000574848 LILRB5O75023 590 aa11.23□□□□□ -0.61
LITAF-216ENST00000574848 MFAP3LO75121 409 aa11.23□□□□□ -0.61
LITAF-216ENST00000574848 PAPSS2O95340 614 aaPredicted RBP11.23□□□□□ -0.61
LITAF-216ENST00000574848 OLFM2O95897 454 aa11.23□□□□□ -0.61
LITAF-216ENST00000574848 USP17L7P0C7H9 530 aa11.23□□□□□ -0.61
LITAF-216ENST00000574848 P4HA1P13674 534 aa11.23□□□□□ -0.61
LITAF-216ENST00000574848 RPL13P26373 211 aaKnown RBP11.23□□□□□ -0.61
LITAF-216ENST00000574848 ANXA13P27216 316 aa11.23□□□□□ -0.61
LITAF-216ENST00000574848 ASPAP45381 313 aa11.23□□□□□ -0.61
LITAF-216ENST00000574848 PPP3CCP48454 512 aa11.23□□□□□ -0.61
LITAF-216ENST00000574848 PDE6CP51160 858 aa11.23□□□□□ -0.61
LITAF-216ENST00000574848 VAMP7P51809 220 aa11.23□□□□□ -0.61
LITAF-216ENST00000574848 CACNA2D1P54289 1103 aa11.23□□□□□ -0.61
LITAF-216ENST00000574848 USP46P62068 366 aa11.23□□□□□ -0.61
LITAF-216ENST00000574848 INCA1Q0VD86 236 aa11.23□□□□□ -0.61
LITAF-216ENST00000574848 MTAPQ13126 283 aa11.23□□□□□ -0.61
LITAF-216ENST00000574848 CCINQ13939 588 aa11.23□□□□□ -0.61
LITAF-216ENST00000574848 LRRC32Q14392 662 aa11.23□□□□□ -0.61
LITAF-216ENST00000574848 MAN2A1Q16706 1144 aa11.23□□□□□ -0.61
LITAF-216ENST00000574848 SGSM1Q2NKQ1 1148 aa11.23□□□□□ -0.61
LITAF-216ENST00000574848 ITPRIPL2Q3MIP1 535 aa11.23□□□□□ -0.61
LITAF-216ENST00000574848 CEP135Q66GS9 1140 aa11.23□□□□□ -0.61
LITAF-216ENST00000574848 TXNDC11Q6PKC3 985 aa11.23□□□□□ -0.61
LITAF-216ENST00000574848 ZC3H3Q8IXZ2 948 aaKnown RBP11.23□□□□□ -0.61
LITAF-216ENST00000574848 KIAA1958Q8N8K9 716 aa11.23□□□□□ -0.61
LITAF-216ENST00000574848 ZBTB44Q8NCP5 570 aa11.23□□□□□ -0.61
LITAF-216ENST00000574848 CHFRQ96EP1 664 aa11.23□□□□□ -0.61
LITAF-216ENST00000574848 TNIP3Q96KP6 325 aa11.23□□□□□ -0.61
LITAF-216ENST00000574848 B3GNT5Q9BYG0 378 aa11.23□□□□□ -0.61
LITAF-216ENST00000574848 FAM126AQ9BYI3 521 aaPredicted RBP11.23□□□□□ -0.61
LITAF-216ENST00000574848 ZNF518BQ9C0D4 1074 aa11.23□□□□□ -0.61
LITAF-216ENST00000574848 SDCBP2Q9H190 292 aa11.23□□□□□ -0.61
LITAF-216ENST00000574848 HPS4Q9NQG7 708 aa11.23□□□□□ -0.61
LITAF-216ENST00000574848 GTSE1Q9NYZ3 720 aa11.23□□□□□ -0.61
LITAF-216ENST00000574848 NDRG2Q9UN36 371 aaKnown RBP11.23□□□□□ -0.61
LITAF-216ENST00000574848 ARHGAP26Q9UNA1 814 aa11.23□□□□□ -0.61
LITAF-216ENST00000574848 PCDHGA2Q9Y5H1 932 aa11.23□□□□□ -0.61
LITAF-216ENST00000574848 KIAA1549LQ6ZVL6 1849 aa11.23□□□□□ -0.61
LITAF-216ENST00000574848 TRAV19A0A0A6YYK7 116 aa11.22□□□□□ -0.61
LITAF-216ENST00000574848 FAM186AA6NE01 2351 aa11.22□□□□□ -0.61
LITAF-216ENST00000574848 CETN3O15182 167 aa11.22□□□□□ -0.61
LITAF-216ENST00000574848 ATP8B3O60423 1300 aa11.22□□□□□ -0.61
LITAF-216ENST00000574848 HLA-DRAP01903 254 aa11.22□□□□□ -0.61
LITAF-216ENST00000574848 LMNAP02545 664 aaKnown RBP11.22□□□□□ -0.61
LITAF-216ENST00000574848 GTF2H1P32780 548 aa11.22□□□□□ -0.61
LITAF-216ENST00000574848 PSMC2P35998 433 aaKnown RBP11.22□□□□□ -0.61
LITAF-216ENST00000574848 GRIK1P39086 918 aa11.22□□□□□ -0.61
LITAF-216ENST00000574848 PIK3CAP42336 1068 aa11.22□□□□□ -0.61
LITAF-216ENST00000574848 RAP1GAPP47736 663 aa11.22□□□□□ -0.61
LITAF-216ENST00000574848 SOX9P48436 509 aa11.22□□□□□ -0.61
LITAF-216ENST00000574848 CCR3P51677 355 aa11.22□□□□□ -0.61
LITAF-216ENST00000574848 KPNA1P52294 538 aaPredicted RBP11.22□□□□□ -0.61
LITAF-216ENST00000574848 TNK2Q07912 1038 aa11.22□□□□□ -0.61
LITAF-216ENST00000574848 ARID5BQ14865 1188 aa11.22□□□□□ -0.61
LITAF-216ENST00000574848 MTF1Q14872 753 aa11.22□□□□□ -0.61
LITAF-216ENST00000574848 PDGFRLQ15198 375 aa11.22□□□□□ -0.61
LITAF-216ENST00000574848 CCDC40Q4G0X9 1142 aa11.22□□□□□ -0.61
LITAF-216ENST00000574848 DGKKQ5KSL6 1271 aa11.22□□□□□ -0.61
LITAF-216ENST00000574848 PAQR9Q6ZVX9 377 aa11.22□□□□□ -0.61
LITAF-216ENST00000574848 GVINP1Q7Z2Y8 2422 aa11.22□□□□□ -0.61
LITAF-216ENST00000574848 FAM35AQ86V20 835 aa11.22□□□□□ -0.61
LITAF-216ENST00000574848 UNC93AQ86WB7 457 aa11.22□□□□□ -0.61
LITAF-216ENST00000574848 IRF2BP1Q8IU81 584 aa11.22□□□□□ -0.61
LITAF-216ENST00000574848 GPIHBP1Q8IV16 184 aa11.22□□□□□ -0.61
LITAF-216ENST00000574848 FAM186BQ8IYM0 893 aa11.22□□□□□ -0.61
LITAF-216ENST00000574848 CRYBG2Q8N1P7 616 aa11.22□□□□□ -0.61
LITAF-216ENST00000574848 SYNPOQ8N3V7 929 aa11.22□□□□□ -0.61
LITAF-216ENST00000574848 ZNF397Q8NF99 534 aaPredicted RBP11.22□□□□□ -0.61
LITAF-216ENST00000574848 OVCA2Q8WZ82 227 aa11.22□□□□□ -0.61
LITAF-216ENST00000574848 FAXDC2Q96IV6 333 aa11.22□□□□□ -0.61
LITAF-216ENST00000574848 SLC22A12Q96S37 553 aa11.22□□□□□ -0.61
LITAF-216ENST00000574848 IL37Q9NZH6 218 aa11.22□□□□□ -0.61
LITAF-216ENST00000574848 R4GN57 208 aa11.22□□□□□ -0.61
LITAF-216ENST00000574848 ZNF292O60281 2723 aa11.21□□□□□ -0.61
LITAF-216ENST00000574848 FAM92AA1XBS5 289 aa11.21□□□□□ -0.61
LITAF-216ENST00000574848 C2orf78A6NCI8 922 aa11.21□□□□□ -0.61
LITAF-216ENST00000574848 ZNF840PA6NDX5 716 aa11.21□□□□□ -0.61
LITAF-216ENST00000574848 TEX33O43247 280 aa11.21□□□□□ -0.61
LITAF-216ENST00000574848 OAS1P00973 400 aaKnown RBP11.21□□□□□ -0.61
LITAF-216ENST00000574848 CKMP06732 381 aa11.21□□□□□ -0.61
LITAF-216ENST00000574848 TRIM49P0CI25 452 aa11.21□□□□□ -0.61
LITAF-216ENST00000574848 TRIM49CP0CI26 452 aa11.21□□□□□ -0.61
LITAF-216ENST00000574848 CDH8P55286 799 aa11.21□□□□□ -0.61
LITAF-216ENST00000574848 SLC7A9P82251 487 aa11.21□□□□□ -0.61
LITAF-216ENST00000574848 PPP3CAQ08209 521 aa11.21□□□□□ -0.61
LITAF-216ENST00000574848 RUNX3Q13761 415 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms