RNA–Protein interactions for RNA: ENST00000574151.5

HCFC1R1-206, Transcript of host cell factor C1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC1R1, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-206ENST00000574151 PEX3P56589 373 aa10.69□□□□□ -0.7
HCFC1R1-206ENST00000574151 TEAD2Q15562 447 aa10.69□□□□□ -0.7
HCFC1R1-206ENST00000574151 MAPK6Q16659 721 aa10.69□□□□□ -0.7
HCFC1R1-206ENST00000574151 VWA3BQ502W6 1294 aa10.69□□□□□ -0.7
HCFC1R1-206ENST00000574151 USP39Q53GS9 565 aaKnown RBP10.69□□□□□ -0.7
HCFC1R1-206ENST00000574151 ARSHQ5FYA8 562 aa10.69□□□□□ -0.7
HCFC1R1-206ENST00000574151 CENPPQ6IPU0 288 aa10.69□□□□□ -0.7
HCFC1R1-206ENST00000574151 FSTL4Q6MZW2 842 aa10.69□□□□□ -0.7
HCFC1R1-206ENST00000574151 PCSK4Q6UW60 755 aa10.69□□□□□ -0.7
HCFC1R1-206ENST00000574151 KIAA1328Q86T90 577 aa10.69□□□□□ -0.7
HCFC1R1-206ENST00000574151 SYCP3Q8IZU3 236 aa10.69□□□□□ -0.7
HCFC1R1-206ENST00000574151 RNF149Q8NC42 400 aa10.69□□□□□ -0.7
HCFC1R1-206ENST00000574151 SPIRE2Q8WWL2 714 aa10.69□□□□□ -0.7
HCFC1R1-206ENST00000574151 EXOC4Q96A65 974 aa10.69□□□□□ -0.7
HCFC1R1-206ENST00000574151 REEP2Q9BRK0 252 aa10.69□□□□□ -0.7
HCFC1R1-206ENST00000574151 RUSC1Q9BVN2 902 aa10.69□□□□□ -0.7
HCFC1R1-206ENST00000574151 EIF2AQ9BY44 585 aaKnown RBP10.69□□□□□ -0.7
HCFC1R1-206ENST00000574151 VPS16Q9H269 839 aa10.69□□□□□ -0.7
HCFC1R1-206ENST00000574151 BLZF1Q9H2G9 400 aa10.69□□□□□ -0.7
HCFC1R1-206ENST00000574151 TMEM206Q9H813 350 aa10.69□□□□□ -0.7
HCFC1R1-206ENST00000574151 POLMQ9NP87 494 aaPredicted RBP10.69□□□□□ -0.7
HCFC1R1-206ENST00000574151 LZTFL1Q9NQ48 299 aa10.69□□□□□ -0.7
HCFC1R1-206ENST00000574151 TAB2Q9NYJ8 693 aa10.69□□□□□ -0.7
HCFC1R1-206ENST00000574151 KLK14Q9P0G3 267 aa10.69□□□□□ -0.7
HCFC1R1-206ENST00000574151 SRPK3Q9UPE1 567 aa10.69□□□□□ -0.7
HCFC1R1-206ENST00000574151 SAR1BQ9Y6B6 198 aa10.69□□□□□ -0.7
HCFC1R1-206ENST00000574151 NUP210Q8TEM1 1887 aaPredicted RBP10.68□□□□□ -0.7
HCFC1R1-206ENST00000574151 COL5A1P20908 1838 aaPredicted RBP10.68□□□□□ -0.7
HCFC1R1-206ENST00000574151 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.68□□□□□ -0.7
HCFC1R1-206ENST00000574151 CASTOR2A6NHX0 329 aa10.68□□□□□ -0.7
HCFC1R1-206ENST00000574151 INO80B-WBP1J3KQ70 363 aa10.68□□□□□ -0.7
HCFC1R1-206ENST00000574151 TACC1O75410 805 aa10.68□□□□□ -0.7
HCFC1R1-206ENST00000574151 EGFP01133 1207 aa10.68□□□□□ -0.7
HCFC1R1-206ENST00000574151 TCP1P17987 556 aaKnown RBP10.68□□□□□ -0.7
HCFC1R1-206ENST00000574151 AKAP5P24588 427 aa10.68□□□□□ -0.7
HCFC1R1-206ENST00000574151 ELF1P32519 619 aa10.68□□□□□ -0.7
HCFC1R1-206ENST00000574151 VAV2P52735 878 aa10.68□□□□□ -0.7
HCFC1R1-206ENST00000574151 GRSF1Q12849 480 aaKnown RBP eCLIP10.68□□□□□ -0.7
HCFC1R1-206ENST00000574151 HNRNPDQ14103 355 aaKnown RBP10.68□□□□□ -0.7
HCFC1R1-206ENST00000574151 TAF1BQ53T94 588 aaPredicted RBP10.68□□□□□ -0.7
HCFC1R1-206ENST00000574151 C10orf76Q5T2E6 689 aa10.68□□□□□ -0.7
HCFC1R1-206ENST00000574151 PAPD7Q5XG87 772 aaKnown RBP10.68□□□□□ -0.7
HCFC1R1-206ENST00000574151 PDXDC1Q6P996 788 aa10.68□□□□□ -0.7
HCFC1R1-206ENST00000574151 RNF10Q8N5U6 811 aaKnown RBP10.68□□□□□ -0.7
HCFC1R1-206ENST00000574151 CNOT6LQ96LI5 555 aaKnown RBP10.68□□□□□ -0.7
HCFC1R1-206ENST00000574151 CCDC42Q96M95 316 aa10.68□□□□□ -0.7
HCFC1R1-206ENST00000574151 LRRC3BQ96PB8 259 aa10.68□□□□□ -0.7
HCFC1R1-206ENST00000574151 TCHPQ9BT92 498 aa10.68□□□□□ -0.7
HCFC1R1-206ENST00000574151 NFKBIZQ9BYH8 718 aa10.68□□□□□ -0.7
HCFC1R1-206ENST00000574151 UBXN6Q9BZV1 441 aa10.68□□□□□ -0.7
HCFC1R1-206ENST00000574151 MINDY3Q9H8M7 445 aa10.68□□□□□ -0.7
HCFC1R1-206ENST00000574151 TRPV4Q9HBA0 871 aa10.68□□□□□ -0.7
HCFC1R1-206ENST00000574151 IFT122Q9HBG6 1241 aa10.68□□□□□ -0.7
HCFC1R1-206ENST00000574151 OLFML3Q9NRN5 406 aa10.68□□□□□ -0.7
HCFC1R1-206ENST00000574151 PRMT7Q9NVM4 692 aaPredicted RBP10.68□□□□□ -0.7
HCFC1R1-206ENST00000574151 EBF1Q9UH73 591 aa10.68□□□□□ -0.7
HCFC1R1-206ENST00000574151 DNMT3LQ9UJW3 386 aa10.68□□□□□ -0.7
HCFC1R1-206ENST00000574151 APOBEC2Q9Y235 224 aaKnown RBP10.68□□□□□ -0.7
HCFC1R1-206ENST00000574151 JRKLQ9Y4A0 524 aa10.68□□□□□ -0.7
HCFC1R1-206ENST00000574151 CREBBPQ92793 2442 aa10.68□□□□□ -0.7
HCFC1R1-206ENST00000574151 PCDH15Q96QU1 1955 aa10.67□□□□□ -0.7
HCFC1R1-206ENST00000574151 ANKRD17O75179 2603 aaKnown RBP10.67□□□□□ -0.7
HCFC1R1-206ENST00000574151 ABCA12Q86UK0 2595 aa10.67□□□□□ -0.7
HCFC1R1-206ENST00000574151 NPHP3-ACAD11A0A0J9YXS1 232 aa10.67□□□□□ -0.7
HCFC1R1-206ENST00000574151 K7ENM7 598 aa10.67□□□□□ -0.7
HCFC1R1-206ENST00000574151 PES1O00541 588 aaKnown RBP10.67□□□□□ -0.7
HCFC1R1-206ENST00000574151 MAP2K7O14733 419 aa10.67□□□□□ -0.7
HCFC1R1-206ENST00000574151 MICAL2O94851 1124 aa10.67□□□□□ -0.7
HCFC1R1-206ENST00000574151 KIF4AO95239 1232 aa10.67□□□□□ -0.7
HCFC1R1-206ENST00000574151 GCNT3O95395 438 aa10.67□□□□□ -0.7
HCFC1R1-206ENST00000574151 AXLP30530 894 aa10.67□□□□□ -0.7
HCFC1R1-206ENST00000574151 EIF2S3P41091 472 aaKnown RBP10.67□□□□□ -0.7
HCFC1R1-206ENST00000574151 MATR3P43243 847 aaKnown RBP eCLIP10.67□□□□□ -0.7
HCFC1R1-206ENST00000574151 NPTX2P47972 431 aa10.67□□□□□ -0.7
HCFC1R1-206ENST00000574151 FKBP3Q00688 224 aaKnown RBP10.67□□□□□ -0.7
HCFC1R1-206ENST00000574151 CACNB1Q02641 598 aaPredicted RBP10.67□□□□□ -0.7
HCFC1R1-206ENST00000574151 FCHO2Q0JRZ9 810 aa10.67□□□□□ -0.7
HCFC1R1-206ENST00000574151 DMC1Q14565 340 aa10.67□□□□□ -0.7
HCFC1R1-206ENST00000574151 IFI16Q16666 785 aaKnown RBP10.67□□□□□ -0.7
HCFC1R1-206ENST00000574151 FAM26FQ5R3K3 315 aa10.67□□□□□ -0.7
HCFC1R1-206ENST00000574151 CCDC122Q5T0U0 273 aa10.67□□□□□ -0.7
HCFC1R1-206ENST00000574151 SLC23A3Q6PIS1 610 aa10.67□□□□□ -0.7
HCFC1R1-206ENST00000574151 RTL10Q7L3V2 364 aa10.67□□□□□ -0.7
HCFC1R1-206ENST00000574151 ZNF720Q7Z2F6 126 aa10.67□□□□□ -0.7
HCFC1R1-206ENST00000574151 TRAPPC11Q7Z392 1133 aa10.67□□□□□ -0.7
HCFC1R1-206ENST00000574151 HAUS6Q7Z4H7 955 aa10.67□□□□□ -0.7
HCFC1R1-206ENST00000574151 TTC30AQ86WT1 665 aa10.67□□□□□ -0.7
HCFC1R1-206ENST00000574151 SYT12Q8IV01 421 aa10.67□□□□□ -0.7
HCFC1R1-206ENST00000574151 HACE1Q8IYU2 909 aa10.67□□□□□ -0.7
HCFC1R1-206ENST00000574151 MINDY1Q8N5J2 469 aa10.67□□□□□ -0.7
HCFC1R1-206ENST00000574151 GSTCDQ8NEC7 633 aa10.67□□□□□ -0.7
HCFC1R1-206ENST00000574151 RPLP0P6Q8NHW5 317 aa10.67□□□□□ -0.7
HCFC1R1-206ENST00000574151 FAM71BQ8TC56 605 aa10.67□□□□□ -0.7
HCFC1R1-206ENST00000574151 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.67□□□□□ -0.75e-8■■■■■ 65.3
HCFC1R1-206ENST00000574151 JAKMIP2Q96AA8 810 aa10.67□□□□□ -0.7
HCFC1R1-206ENST00000574151 E2F7Q96AV8 911 aa10.67□□□□□ -0.7
HCFC1R1-206ENST00000574151 HVCN1Q96D96 273 aa10.67□□□□□ -0.7
HCFC1R1-206ENST00000574151 DNAJC19Q96DA6 116 aa10.67□□□□□ -0.7
HCFC1R1-206ENST00000574151 BICD1Q96G01 975 aa10.67□□□□□ -0.7
HCFC1R1-206ENST00000574151 CALR3Q96L12 384 aaKnown RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms