RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 FAM92AA1XBS5 289 aa11.63□□□□□ -0.55
CHD3-216ENST00000573936 HHLA1C9JL84 531 aa11.63□□□□□ -0.55
CHD3-216ENST00000573936 DPYSL4O14531 572 aa11.63□□□□□ -0.55
CHD3-216ENST00000573936 THAP12O43422 761 aa11.63□□□□□ -0.55
CHD3-216ENST00000573936 BRD2P25440 801 aaKnown RBP11.63□□□□□ -0.55
CHD3-216ENST00000573936 AVPR1AP37288 418 aa11.63□□□□□ -0.55
CHD3-216ENST00000573936 CLCN5P51795 746 aa11.63□□□□□ -0.55
CHD3-216ENST00000573936 UBASH3AP57075 661 aa11.63□□□□□ -0.55
CHD3-216ENST00000573936 POLR2FP61218 127 aaKnown RBP11.63□□□□□ -0.55
CHD3-216ENST00000573936 USP46P62068 366 aa11.63□□□□□ -0.55
CHD3-216ENST00000573936 FANCCQ00597 558 aa11.63□□□□□ -0.55
CHD3-216ENST00000573936 IFRD2Q12894 506 aaPredicted RBP11.63□□□□□ -0.55
CHD3-216ENST00000573936 TAF10Q12962 218 aa11.63□□□□□ -0.55
CHD3-216ENST00000573936 HTR4Q13639 388 aa11.63□□□□□ -0.55
CHD3-216ENST00000573936 PARM1Q6UWI2 310 aa11.63□□□□□ -0.55
CHD3-216ENST00000573936 TMEM150AQ86TG1 271 aa11.63□□□□□ -0.55
CHD3-216ENST00000573936 TTC30AQ86WT1 665 aa11.63□□□□□ -0.55
CHD3-216ENST00000573936 FMNL3Q8IVF7 1028 aa11.63□□□□□ -0.55
CHD3-216ENST00000573936 FAM71AQ8IYT1 594 aa11.63□□□□□ -0.55
CHD3-216ENST00000573936 CMTM8Q8IZV2 173 aa11.63□□□□□ -0.55
CHD3-216ENST00000573936 TMEM105Q8N8V8 129 aa11.63□□□□□ -0.55
CHD3-216ENST00000573936 MAB21L3Q8N8X9 362 aa11.63□□□□□ -0.55
CHD3-216ENST00000573936 FLCNQ8NFG4 579 aa11.63□□□□□ -0.55
CHD3-216ENST00000573936 SCAMP5Q8TAC9 235 aa11.63□□□□□ -0.55
CHD3-216ENST00000573936 ZNF606Q8WXB4 792 aa11.63□□□□□ -0.55
CHD3-216ENST00000573936 TFAP2BQ92481 460 aa11.63□□□□□ -0.55
CHD3-216ENST00000573936 SPAG5Q96R06 1193 aa11.63□□□□□ -0.55
CHD3-216ENST00000573936 GANQ9H2C0 597 aa11.63□□□□□ -0.55
CHD3-216ENST00000573936 TLR8Q9NR97 1041 aaKnown RBP11.63□□□□□ -0.55
CHD3-216ENST00000573936 FAM207AQ9NSI2 230 aaPredicted RBP11.63□□□□□ -0.55
CHD3-216ENST00000573936 SCML2Q9UQR0 700 aa11.63□□□□□ -0.55
CHD3-216ENST00000573936 NUMBLQ9Y6R0 609 aa11.63□□□□□ -0.55
CHD3-216ENST00000573936 PTPRZ1P23471 2315 aaPredicted RBP11.63□□□□□ -0.55
CHD3-216ENST00000573936 GVINP1Q7Z2Y8 2422 aa11.62□□□□□ -0.55
CHD3-216ENST00000573936 DMXL1Q9Y485 3027 aa11.62□□□□□ -0.55
CHD3-216ENST00000573936 FAM186AA6NE01 2351 aa11.62□□□□□ -0.55
CHD3-216ENST00000573936 TRAV19A0A0A6YYK7 116 aa11.62□□□□□ -0.55
CHD3-216ENST00000573936 A0A1W2PQC6 194 aa11.62□□□□□ -0.55
CHD3-216ENST00000573936 ZNF840PA6NDX5 716 aa11.62□□□□□ -0.55
CHD3-216ENST00000573936 M0QYV0 167 aa11.62□□□□□ -0.55
CHD3-216ENST00000573936 STK25O00506 426 aa11.62□□□□□ -0.55
CHD3-216ENST00000573936 CYP26A1O43174 497 aa11.62□□□□□ -0.55
CHD3-216ENST00000573936 TADA3O75528 432 aa11.62□□□□□ -0.55
CHD3-216ENST00000573936 ABL1P00519 1130 aa11.62□□□□□ -0.55
CHD3-216ENST00000573936 TPM3P06753 285 aa11.62□□□□□ -0.55
CHD3-216ENST00000573936 USP17L7P0C7H9 530 aa11.62□□□□□ -0.55
CHD3-216ENST00000573936 KRT9P35527 623 aa11.62□□□□□ -0.55
CHD3-216ENST00000573936 STAT1P42224 750 aa11.62□□□□□ -0.55
CHD3-216ENST00000573936 PLA2G4AP47712 749 aa11.62□□□□□ -0.55
CHD3-216ENST00000573936 PSEN1P49768 467 aa11.62□□□□□ -0.55
CHD3-216ENST00000573936 KIF11P52732 1056 aa11.62□□□□□ -0.55
CHD3-216ENST00000573936 PDE4CQ08493 712 aa11.62□□□□□ -0.55
CHD3-216ENST00000573936 ZNF268Q14587 947 aaPredicted RBP11.62□□□□□ -0.55
CHD3-216ENST00000573936 NR1I3Q14994 352 aa11.62□□□□□ -0.55
CHD3-216ENST00000573936 PKDCCQ504Y2 493 aa11.62□□□□□ -0.55
CHD3-216ENST00000573936 RAB41Q5JT25 222 aa11.62□□□□□ -0.55
CHD3-216ENST00000573936 FAM78AQ5JUQ0 283 aa11.62□□□□□ -0.55
CHD3-216ENST00000573936 SNX30Q5VWJ9 437 aa11.62□□□□□ -0.55
CHD3-216ENST00000573936 TXNDC8Q6A555 127 aa11.62□□□□□ -0.55
CHD3-216ENST00000573936 CACNA2D4Q7Z3S7 1137 aa11.62□□□□□ -0.55
CHD3-216ENST00000573936 PIGZQ86VD9 579 aa11.62□□□□□ -0.55
CHD3-216ENST00000573936 ARID3BQ8IVW6 561 aaPredicted RBP11.62□□□□□ -0.55
CHD3-216ENST00000573936 ARHGAP18Q8N392 663 aa11.62□□□□□ -0.55
CHD3-216ENST00000573936 SLC44A3Q8N4M1 653 aa11.62□□□□□ -0.55
CHD3-216ENST00000573936 UBA3Q8TBC4 463 aa11.62□□□□□ -0.55
CHD3-216ENST00000573936 DEPDC1BQ8WUY9 529 aa11.62□□□□□ -0.55
CHD3-216ENST00000573936 KCTD13Q8WZ19 329 aa11.62□□□□□ -0.55
CHD3-216ENST00000573936 FGF14Q92915 247 aa11.62□□□□□ -0.55
CHD3-216ENST00000573936 HSFY1Q96LI6 401 aa11.62□□□□□ -0.55
CHD3-216ENST00000573936 ZSWIM3Q96MP5 696 aa11.62□□□□□ -0.55
CHD3-216ENST00000573936 NAP1L5Q96NT1 182 aaPredicted RBP11.62□□□□□ -0.55
CHD3-216ENST00000573936 SLC46A2Q9BY10 475 aa11.62□□□□□ -0.55
CHD3-216ENST00000573936 KIF9Q9HAQ2 790 aa11.62□□□□□ -0.55
CHD3-216ENST00000573936 LRRC4Q9HBW1 653 aa11.62□□□□□ -0.55
CHD3-216ENST00000573936 TRPC7Q9HCX4 862 aa11.62□□□□□ -0.55
CHD3-216ENST00000573936 AJAP1Q9UKB5 411 aaPredicted RBP11.62□□□□□ -0.55
CHD3-216ENST00000573936 USP3Q9Y6I4 520 aa11.62□□□□□ -0.55
CHD3-216ENST00000573936 ZNF292O60281 2723 aa11.62□□□□□ -0.55
CHD3-216ENST00000573936 PTPRDP23468 1912 aa11.62□□□□□ -0.55
CHD3-216ENST00000573936 NOTCH4Q99466 2003 aa11.61□□□□□ -0.55
CHD3-216ENST00000573936 F8VZ95 297 aa11.61□□□□□ -0.55
CHD3-216ENST00000573936 NRG2O14511 850 aaPredicted RBP11.61□□□□□ -0.55
CHD3-216ENST00000573936 TEX33O43247 280 aa11.61□□□□□ -0.55
CHD3-216ENST00000573936 CBFA2T2O43439 604 aa11.61□□□□□ -0.55
CHD3-216ENST00000573936 ZDHHC11BP0C7U3 371 aa11.61□□□□□ -0.55
CHD3-216ENST00000573936 CCDC172P0C7W6 258 aa11.61□□□□□ -0.55
CHD3-216ENST00000573936 HDCP19113 662 aa11.61□□□□□ -0.55
CHD3-216ENST00000573936 CLCN1P35523 988 aa11.61□□□□□ -0.55
CHD3-216ENST00000573936 ACADSBP45954 432 aa11.61□□□□□ -0.55
CHD3-216ENST00000573936 KLK7P49862 253 aa11.61□□□□□ -0.55
CHD3-216ENST00000573936 TUBP50607 506 aa11.61□□□□□ -0.55
CHD3-216ENST00000573936 SNX16P57768 344 aa11.61□□□□□ -0.55
CHD3-216ENST00000573936 HECTD3Q5T447 861 aa11.61□□□□□ -0.55
CHD3-216ENST00000573936 STXBP5Q5T5C0 1151 aa11.61□□□□□ -0.55
CHD3-216ENST00000573936 TANGO2Q6ICL3 276 aa11.61□□□□□ -0.55
CHD3-216ENST00000573936 CCDC186Q7Z3E2 898 aa11.61□□□□□ -0.55
CHD3-216ENST00000573936 TADA2BQ86TJ2 420 aa11.61□□□□□ -0.55
CHD3-216ENST00000573936 MFSD6LQ8IWD5 586 aa11.61□□□□□ -0.55
CHD3-216ENST00000573936 SCML4Q8N228 414 aa11.61□□□□□ -0.55
CHD3-216ENST00000573936 CELF5Q8N6W0 485 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms