RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 HNRNPABQ99729 332 aaKnown RBP18.35■□□□□ 0.53
SMG6-212ENST00000573153 FAM126AQ9BYI3 521 aaPredicted RBP18.35■□□□□ 0.53
SMG6-212ENST00000573153 CYP3A43Q9HB55 503 aa18.35■□□□□ 0.53
SMG6-212ENST00000573153 MAN1B1Q9UKM7 699 aa18.35■□□□□ 0.53
SMG6-212ENST00000573153 CPQQ9Y646 472 aa18.35■□□□□ 0.53
SMG6-212ENST00000573153 STX10O60499 249 aa18.34■□□□□ 0.53
SMG6-212ENST00000573153 RTN3O95197 1032 aaPredicted RBP18.34■□□□□ 0.53
SMG6-212ENST00000573153 EPB41P11171 864 aaKnown RBP18.34■□□□□ 0.53
SMG6-212ENST00000573153 TGM1P22735 817 aa18.34■□□□□ 0.53
SMG6-212ENST00000573153 YWHAQP27348 245 aa18.34■□□□□ 0.53
SMG6-212ENST00000573153 CXCL12P48061 93 aa18.34■□□□□ 0.53
SMG6-212ENST00000573153 MXI1P50539 228 aa18.34■□□□□ 0.53
SMG6-212ENST00000573153 GALK1P51570 392 aa18.34■□□□□ 0.53
SMG6-212ENST00000573153 IFRD2Q12894 506 aaPredicted RBP18.34■□□□□ 0.53
SMG6-212ENST00000573153 SYNPOQ8N3V7 929 aa18.34■□□□□ 0.53
SMG6-212ENST00000573153 UBR7Q8N806 425 aa18.34■□□□□ 0.53
SMG6-212ENST00000573153 SLC35C1Q96A29 364 aa18.34■□□□□ 0.53
SMG6-212ENST00000573153 DHTKD1Q96HY7 919 aaPredicted RBP18.34■□□□□ 0.53
SMG6-212ENST00000573153 TSG101Q99816 390 aa18.34■□□□□ 0.53
SMG6-212ENST00000573153 DUSP9Q99956 384 aaKnown RBP18.34■□□□□ 0.53
SMG6-212ENST00000573153 IMPG2Q9BZV3 1241 aa18.34■□□□□ 0.53
SMG6-212ENST00000573153 MMRN2Q9H8L6 949 aa18.34■□□□□ 0.53
SMG6-212ENST00000573153 POLR3BQ9NW08 1133 aaPredicted RBP18.34■□□□□ 0.53
SMG6-212ENST00000573153 OSER1Q9NX31 292 aa18.34■□□□□ 0.53
SMG6-212ENST00000573153 GMIPQ9P107 970 aa18.34■□□□□ 0.53
SMG6-212ENST00000573153 ATP8B3O60423 1300 aa18.33■□□□□ 0.53
SMG6-212ENST00000573153 PPP1R3GB7ZBB8 358 aa18.33■□□□□ 0.52
SMG6-212ENST00000573153 SCAMP3O14828 347 aaKnown RBP18.33■□□□□ 0.52
SMG6-212ENST00000573153 CYP17A1P05093 508 aa18.33■□□□□ 0.52
SMG6-212ENST00000573153 HOXA6P31267 233 aa18.33■□□□□ 0.52
SMG6-212ENST00000573153 TTI2Q6NXR4 508 aa18.33■□□□□ 0.52
SMG6-212ENST00000573153 TATDN2Q93075 761 aa18.33■□□□□ 0.52
SMG6-212ENST00000573153 FBXO32Q969P5 355 aa18.33■□□□□ 0.52
SMG6-212ENST00000573153 SLITRK1Q96PX8 696 aa18.33■□□□□ 0.52
SMG6-212ENST00000573153 FAM124BQ9H5Z6 455 aaPredicted RBP18.33■□□□□ 0.52
SMG6-212ENST00000573153 CCSER2Q9H7U1 834 aa18.33■□□□□ 0.52
SMG6-212ENST00000573153 NMUR1Q9HB89 426 aa18.33■□□□□ 0.52
SMG6-212ENST00000573153 COMMD8Q9NX08 183 aa18.33■□□□□ 0.52
SMG6-212ENST00000573153 SMPD4Q9NXE4 827 aa18.33■□□□□ 0.52
SMG6-212ENST00000573153 CHMP5Q9NZZ3 219 aa18.33■□□□□ 0.52
SMG6-212ENST00000573153 CHORDC1Q9UHD1 332 aaPredicted RBP18.33■□□□□ 0.52
SMG6-212ENST00000573153 MYH10P35580 1976 aa18.33■□□□□ 0.52
SMG6-212ENST00000573153 DNAH14Q0VDD8 3507 aa18.32■□□□□ 0.52
SMG6-212ENST00000573153 EML5Q05BV3 1969 aa18.32■□□□□ 0.52
SMG6-212ENST00000573153 CHURC1-FNTBB4DL54 471 aa18.32■□□□□ 0.52
SMG6-212ENST00000573153 PSMA7O14818 248 aa18.32■□□□□ 0.52
SMG6-212ENST00000573153 HRO43593 1189 aa18.32■□□□□ 0.52
SMG6-212ENST00000573153 ADORA2BP29275 332 aa18.32■□□□□ 0.52
SMG6-212ENST00000573153 TUBP50607 506 aa18.32■□□□□ 0.52
SMG6-212ENST00000573153 PDE6CP51160 858 aa18.32■□□□□ 0.52
SMG6-212ENST00000573153 MAP3K7CLP57077 242 aa18.32■□□□□ 0.52
SMG6-212ENST00000573153 STIM1Q13586 685 aa18.32■□□□□ 0.52
SMG6-212ENST00000573153 PPP1R26Q5T8A7 1209 aaPredicted RBP18.32■□□□□ 0.52
SMG6-212ENST00000573153 CC2D1AQ6P1N0 951 aaPredicted RBP18.32■□□□□ 0.52
SMG6-212ENST00000573153 FILIP1Q7Z7B0 1213 aa18.32■□□□□ 0.52
SMG6-212ENST00000573153 ADGRG2Q8IZP9 1017 aa18.32■□□□□ 0.52
SMG6-212ENST00000573153 CPA6Q8N4T0 437 aa18.32■□□□□ 0.52
SMG6-212ENST00000573153 SLC4A11Q8NBS3 891 aa18.32■□□□□ 0.52
SMG6-212ENST00000573153 FBXL13Q8NEE6 735 aa18.32■□□□□ 0.52
SMG6-212ENST00000573153 PDZD8Q8NEN9 1154 aa18.32■□□□□ 0.52
SMG6-212ENST00000573153 ATP2A3Q93084 1043 aa18.32■□□□□ 0.52
SMG6-212ENST00000573153 P2RY13Q9BPV8 354 aa18.32■□□□□ 0.52
SMG6-212ENST00000573153 MED10Q9BTT4 135 aa18.32■□□□□ 0.52
SMG6-212ENST00000573153 NT5C1AQ9BXI3 368 aa18.32■□□□□ 0.52
SMG6-212ENST00000573153 RAB20Q9NX57 234 aa18.32■□□□□ 0.52
SMG6-212ENST00000573153 SMG5Q9UPR3 1016 aaKnown RBP18.32■□□□□ 0.52
SMG6-212ENST00000573153 RNF40O75150 1001 aa18.31■□□□□ 0.52
SMG6-212ENST00000573153 CD58P19256 250 aa18.31■□□□□ 0.52
SMG6-212ENST00000573153 IFNAR2P48551 515 aa18.31■□□□□ 0.52
SMG6-212ENST00000573153 FNTBP49356 437 aa18.31■□□□□ 0.52
SMG6-212ENST00000573153 RAD23BP54727 409 aa18.31■□□□□ 0.52
SMG6-212ENST00000573153 UBE2HP62256 183 aa18.31■□□□□ 0.52
SMG6-212ENST00000573153 SRSF5Q13243 272 aaKnown RBP18.31■□□□□ 0.52
SMG6-212ENST00000573153 MORC3Q14149 939 aa18.31■□□□□ 0.52
SMG6-212ENST00000573153 ISM2Q6H9L7 571 aa18.31■□□□□ 0.52
SMG6-212ENST00000573153 C12orf40Q86WS4 652 aa18.31■□□□□ 0.52
SMG6-212ENST00000573153 SFTPA1Q8IWL2 248 aa18.31■□□□□ 0.52
SMG6-212ENST00000573153 PHTF2Q8N3S3 785 aa18.31■□□□□ 0.52
SMG6-212ENST00000573153 CYFIP2Q96F07 1278 aa18.31■□□□□ 0.52
SMG6-212ENST00000573153 P2RY11Q96G91 374 aa18.31■□□□□ 0.52
SMG6-212ENST00000573153 PNPLA8Q9NP80 782 aa18.31■□□□□ 0.52
SMG6-212ENST00000573153 CFAP97Q9P2B7 532 aa18.31■□□□□ 0.52
SMG6-212ENST00000573153 SPTBN4Q9H254 2564 aa18.31■□□□□ 0.52
SMG6-212ENST00000573153 FAM200BP0CF97 657 aa18.3■□□□□ 0.52
SMG6-212ENST00000573153 RHBDF2Q6PJF5 856 aa18.3■□□□□ 0.52
SMG6-212ENST00000573153 SCD5Q86SK9 330 aa18.3■□□□□ 0.52
SMG6-212ENST00000573153 TTC39CQ8N584 583 aa18.3■□□□□ 0.52
SMG6-212ENST00000573153 CCDC150Q8NCX0 1101 aa18.3■□□□□ 0.52
SMG6-212ENST00000573153 LMO3Q8TAP4 145 aa18.3■□□□□ 0.52
SMG6-212ENST00000573153 ATRIPQ8WXE1 791 aa18.3■□□□□ 0.52
SMG6-212ENST00000573153 RUBCNQ92622 972 aa18.3■□□□□ 0.52
SMG6-212ENST00000573153 CD101Q93033 1021 aa18.3■□□□□ 0.52
SMG6-212ENST00000573153 CEP63Q96MT8 703 aa18.3■□□□□ 0.52
SMG6-212ENST00000573153 MED15Q96RN5 788 aa18.3■□□□□ 0.52
SMG6-212ENST00000573153 CYLDQ9NQC7 956 aa18.3■□□□□ 0.52
SMG6-212ENST00000573153 CISHQ9NSE2 258 aa18.3■□□□□ 0.52
SMG6-212ENST00000573153 USP3Q9Y6I4 520 aa18.3■□□□□ 0.52
SMG6-212ENST00000573153 K7EQS6 105 aa18.29■□□□□ 0.52
SMG6-212ENST00000573153 PMM2O15305 246 aa18.29■□□□□ 0.52
SMG6-212ENST00000573153 CYP26A1O43174 497 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms