RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-208ENST00000572351 FBXO21O94952 628 aa9.93□□□□□ -0.82
NPLOC4-208ENST00000572351 CALB1P05937 261 aa9.93□□□□□ -0.82
NPLOC4-208ENST00000572351 FAM228BP0C875 321 aa9.93□□□□□ -0.82
NPLOC4-208ENST00000572351 HMGA1P17096 107 aaKnown RBP9.93□□□□□ -0.82
NPLOC4-208ENST00000572351 FSHRP23945 695 aa9.93□□□□□ -0.82
NPLOC4-208ENST00000572351 CYLC1P35663 651 aaPredicted RBP9.93□□□□□ -0.82
NPLOC4-208ENST00000572351 MTHFRP42898 656 aa9.93□□□□□ -0.82
NPLOC4-208ENST00000572351 NTHL1P78549 312 aa9.93□□□□□ -0.82
NPLOC4-208ENST00000572351 CENPCQ03188 943 aa9.93□□□□□ -0.82
NPLOC4-208ENST00000572351 PTPN20Q4JDL3 420 aa9.93□□□□□ -0.82
NPLOC4-208ENST00000572351 ARHGAP15Q53QZ3 475 aa9.93□□□□□ -0.82
NPLOC4-208ENST00000572351 RAB41Q5JT25 222 aa9.93□□□□□ -0.82
NPLOC4-208ENST00000572351 CCDC122Q5T0U0 273 aa9.93□□□□□ -0.82
NPLOC4-208ENST00000572351 ACAD10Q6JQN1 1059 aa9.93□□□□□ -0.82
NPLOC4-208ENST00000572351 TOGARAM2Q6ZUX3 1019 aa9.93□□□□□ -0.82
NPLOC4-208ENST00000572351 GET4Q7L5D6 327 aaPredicted RBP9.93□□□□□ -0.82
NPLOC4-208ENST00000572351 TMEM110Q86TL2 294 aa9.93□□□□□ -0.82
NPLOC4-208ENST00000572351 ZDHHC17Q8IUH5 632 aa9.93□□□□□ -0.82
NPLOC4-208ENST00000572351 SCUBE3Q8IX30 993 aa9.93□□□□□ -0.82
NPLOC4-208ENST00000572351 ARHGAP18Q8N392 663 aa9.93□□□□□ -0.82
NPLOC4-208ENST00000572351 CCDC112Q8NEF3 446 aa9.93□□□□□ -0.82
NPLOC4-208ENST00000572351 MRPS31Q92665 395 aaKnown RBP9.93□□□□□ -0.82
NPLOC4-208ENST00000572351 FAM149B1Q96BN6 582 aa9.93□□□□□ -0.82
NPLOC4-208ENST00000572351 C18orf8Q96DM3 657 aa9.93□□□□□ -0.82
NPLOC4-208ENST00000572351 TRMT2BQ96GJ1 504 aaKnown RBP9.93□□□□□ -0.82
NPLOC4-208ENST00000572351 MSLNLQ96KJ4 702 aa9.93□□□□□ -0.82
NPLOC4-208ENST00000572351 MYRFLQ96LU7 910 aa9.93□□□□□ -0.82
NPLOC4-208ENST00000572351 NECTIN4Q96NY8 510 aa9.93□□□□□ -0.82
NPLOC4-208ENST00000572351 CPXM1Q96SM3 734 aa9.93□□□□□ -0.82
NPLOC4-208ENST00000572351 SYT11Q9BT88 431 aa9.93□□□□□ -0.82
NPLOC4-208ENST00000572351 TTLL2Q9BWV7 592 aa9.93□□□□□ -0.82
NPLOC4-208ENST00000572351 SLC4A5Q9BY07 1137 aa9.93□□□□□ -0.82
NPLOC4-208ENST00000572351 NACA2Q9H009 215 aa9.93□□□□□ -0.82
NPLOC4-208ENST00000572351 SLITRK6Q9H5Y7 841 aa9.93□□□□□ -0.82
NPLOC4-208ENST00000572351 TRPC7Q9HCX4 862 aa9.93□□□□□ -0.82
NPLOC4-208ENST00000572351 ZNF334Q9HCZ1 680 aaPredicted RBP9.93□□□□□ -0.82
NPLOC4-208ENST00000572351 TLR8Q9NR97 1041 aaKnown RBP9.93□□□□□ -0.82
NPLOC4-208ENST00000572351 GMIPQ9P107 970 aa9.93□□□□□ -0.82
NPLOC4-208ENST00000572351 CHORDC1Q9UHD1 332 aaPredicted RBP9.93□□□□□ -0.82
NPLOC4-208ENST00000572351 CYTH4Q9UIA0 394 aa9.93□□□□□ -0.82
NPLOC4-208ENST00000572351 NAGPAQ9UK23 515 aa9.93□□□□□ -0.82
NPLOC4-208ENST00000572351 STRIP2Q9ULQ0 834 aa9.93□□□□□ -0.82
NPLOC4-208ENST00000572351 COG5Q9UP83 839 aa9.93□□□□□ -0.82
NPLOC4-208ENST00000572351 SCML2Q9UQR0 700 aa9.93□□□□□ -0.82
NPLOC4-208ENST00000572351 TRIP11Q15643 1979 aa9.93□□□□□ -0.82
NPLOC4-208ENST00000572351 SOWAHDA6NJG2 315 aa9.92□□□□□ -0.82
NPLOC4-208ENST00000572351 GOLGA8SH3BPF8 625 aa9.92□□□□□ -0.82
NPLOC4-208ENST00000572351 RTN2O75298 545 aa9.92□□□□□ -0.82
NPLOC4-208ENST00000572351 FTLP02792 175 aaPredicted RBP9.92□□□□□ -0.82
NPLOC4-208ENST00000572351 ERBB2P04626 1255 aa9.92□□□□□ -0.82
NPLOC4-208ENST00000572351 RALAP11233 206 aa9.92□□□□□ -0.82
NPLOC4-208ENST00000572351 GZMAP12544 262 aa9.92□□□□□ -0.82
NPLOC4-208ENST00000572351 MMP8P22894 467 aa9.92□□□□□ -0.82
NPLOC4-208ENST00000572351 PPP3CCP48454 512 aa9.92□□□□□ -0.82
NPLOC4-208ENST00000572351 PSEN1P49768 467 aa9.92□□□□□ -0.82
NPLOC4-208ENST00000572351 YWHAGP61981 247 aaKnown RBP eCLIP9.92□□□□□ -0.82
NPLOC4-208ENST00000572351 SMAD4Q13485 552 aaKnown RBP9.92□□□□□ -0.82
NPLOC4-208ENST00000572351 SLC18A3Q16572 532 aa9.92□□□□□ -0.82
NPLOC4-208ENST00000572351 C2CD6Q53TS8 623 aa9.92□□□□□ -0.82
NPLOC4-208ENST00000572351 FAM102AQ5T9C2 384 aaPredicted RBP9.92□□□□□ -0.82
NPLOC4-208ENST00000572351 BTBD8Q5XKL5 378 aa9.92□□□□□ -0.82
NPLOC4-208ENST00000572351 ALKBH5Q6P6C2 394 aaKnown RBP9.92□□□□□ -0.82
NPLOC4-208ENST00000572351 FAM183BPQ6ZVS7 135 aa9.92□□□□□ -0.82
NPLOC4-208ENST00000572351 RSRC2Q7L4I2 434 aaKnown RBP9.92□□□□□ -0.82
NPLOC4-208ENST00000572351 PHLDB2Q86SQ0 1253 aa9.92□□□□□ -0.82
NPLOC4-208ENST00000572351 TADA2BQ86TJ2 420 aa9.92□□□□□ -0.82
NPLOC4-208ENST00000572351 MON1AQ86VX9 555 aa9.92□□□□□ -0.82
NPLOC4-208ENST00000572351 PHF13Q86YI8 300 aaPredicted RBP9.92□□□□□ -0.82
NPLOC4-208ENST00000572351 TMC8Q8IU68 726 aa9.92□□□□□ -0.82
NPLOC4-208ENST00000572351 CCDC170Q8IYT3 715 aa9.92□□□□□ -0.82
NPLOC4-208ENST00000572351 SMRP1Q8NCR6 262 aa9.92□□□□□ -0.82
NPLOC4-208ENST00000572351 OVCA2Q8WZ82 227 aa9.92□□□□□ -0.82
NPLOC4-208ENST00000572351 IRGQQ8WZA9 623 aa9.92□□□□□ -0.82
NPLOC4-208ENST00000572351 TRIM11Q96F44 468 aa9.92□□□□□ -0.82
NPLOC4-208ENST00000572351 TRIM62Q9BVG3 475 aa9.92□□□□□ -0.82
NPLOC4-208ENST00000572351 S1PR5Q9H228 398 aa9.92□□□□□ -0.82
NPLOC4-208ENST00000572351 WDR6Q9NNW5 1121 aaKnown RBP9.92□□□□□ -0.82
NPLOC4-208ENST00000572351 LUC7LQ9NQ29 371 aaKnown RBP9.92□□□□□ -0.82
NPLOC4-208ENST00000572351 SPTLC3Q9NUV7 552 aa9.92□□□□□ -0.82
NPLOC4-208ENST00000572351 TAS2R14Q9NYV8 317 aa9.92□□□□□ -0.82
NPLOC4-208ENST00000572351 WDR35Q9P2L0 1181 aa9.92□□□□□ -0.82
NPLOC4-208ENST00000572351 CDH22Q9UJ99 828 aa9.92□□□□□ -0.82
NPLOC4-208ENST00000572351 FAM50BQ9Y247 325 aa9.92□□□□□ -0.82
NPLOC4-208ENST00000572351 USP15Q9Y4E8 981 aaPredicted RBP9.92□□□□□ -0.82
NPLOC4-208ENST00000572351 USP3Q9Y6I4 520 aa9.92□□□□□ -0.82
NPLOC4-208ENST00000572351 CLUHO75153 1309 aa9.91□□□□□ -0.82
NPLOC4-208ENST00000572351 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.91□□□□□ -0.82
NPLOC4-208ENST00000572351 A0A1W2PQH9 124 aa9.91□□□□□ -0.82
NPLOC4-208ENST00000572351 ZNF840PA6NDX5 716 aa9.91□□□□□ -0.82
NPLOC4-208ENST00000572351 CAPN9O14815 690 aa9.91□□□□□ -0.82
NPLOC4-208ENST00000572351 PAPSS1O43252 624 aaPredicted RBP9.91□□□□□ -0.82
NPLOC4-208ENST00000572351 MYBL1P10243 752 aa9.91□□□□□ -0.82
NPLOC4-208ENST00000572351 GJA1P17302 382 aa9.91□□□□□ -0.82
NPLOC4-208ENST00000572351 ABCB4P21439 1286 aa9.91□□□□□ -0.82
NPLOC4-208ENST00000572351 RPL34P49207 117 aaKnown RBP9.91□□□□□ -0.82
NPLOC4-208ENST00000572351 EPHA5P54756 1037 aa9.91□□□□□ -0.82
NPLOC4-208ENST00000572351 DAOAP59103 153 aa9.91□□□□□ -0.82
NPLOC4-208ENST00000572351 MRPS5P82675 430 aaKnown RBP9.91□□□□□ -0.82
NPLOC4-208ENST00000572351 CYP4F8P98187 520 aa9.91□□□□□ -0.82
NPLOC4-208ENST00000572351 SLC6A3Q01959 620 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms