RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 ANGEL2Q5VTE6 544 aaKnown RBP17.5■□□□□ 0.39
LITAF-209ENST00000571688 TMEM161BQ8NDZ6 487 aa17.5■□□□□ 0.39
LITAF-209ENST00000571688 ZFP28Q8NHY6 868 aa17.5■□□□□ 0.39
LITAF-209ENST00000571688 GCNAQ96QF7 691 aa17.5■□□□□ 0.39
LITAF-209ENST00000571688 FRMD8P1Q9BZ68 369 aaPredicted RBP17.5■□□□□ 0.39
LITAF-209ENST00000571688 PNPLA8Q9NP80 782 aa17.5■□□□□ 0.39
LITAF-209ENST00000571688 LZTS1Q9Y250 596 aa17.5■□□□□ 0.39
LITAF-209ENST00000571688 DTNAQ9Y4J8 743 aa17.5■□□□□ 0.39
LITAF-209ENST00000571688 CYB561D2O14569 222 aa17.49■□□□□ 0.39
LITAF-209ENST00000571688 WEE2P0C1S8 567 aa17.49■□□□□ 0.39
LITAF-209ENST00000571688 GRAMD1BQ3KR37 738 aa17.49■□□□□ 0.39
LITAF-209ENST00000571688 HSP90AA5PQ58FG0 334 aa17.49■□□□□ 0.39
LITAF-209ENST00000571688 RC3H1Q5TC82 1133 aaKnown RBP17.49■□□□□ 0.39
LITAF-209ENST00000571688 DUS1LQ6P1R4 473 aaKnown RBP17.49■□□□□ 0.39
LITAF-209ENST00000571688 RSAD2Q8WXG1 361 aa17.49■□□□□ 0.39
LITAF-209ENST00000571688 ZNF516Q92618 1163 aa17.49■□□□□ 0.39
LITAF-209ENST00000571688 NLRP4Q96MN2 994 aa17.49■□□□□ 0.39
LITAF-209ENST00000571688 SH2D3AQ9BRG2 576 aa17.49■□□□□ 0.39
LITAF-209ENST00000571688 EHMT1Q9H9B1 1298 aa17.49■□□□□ 0.39
LITAF-209ENST00000571688 UBAP1Q9NZ09 502 aa17.49■□□□□ 0.39
LITAF-209ENST00000571688 ITGA11Q9UKX5 1188 aa17.49■□□□□ 0.39
LITAF-209ENST00000571688 POMPQ9Y244 141 aa17.49■□□□□ 0.39
LITAF-209ENST00000571688 TELO2Q9Y4R8 837 aa17.49■□□□□ 0.39
LITAF-209ENST00000571688 SNRPAP09012 282 aaKnown RBP17.49■□□□□ 0.39
LITAF-209ENST00000571688 SERPINB6P35237 376 aa17.49■□□□□ 0.39
LITAF-209ENST00000571688 COPAP53621 1224 aa17.49■□□□□ 0.39
LITAF-209ENST00000571688 MYLK3Q32MK0 819 aa17.49■□□□□ 0.39
LITAF-209ENST00000571688 BRDTQ58F21 947 aaPredicted RBP17.49■□□□□ 0.39
LITAF-209ENST00000571688 TMEM179Q6ZVK1 233 aa17.49■□□□□ 0.39
LITAF-209ENST00000571688 RTKN2Q8IZC4 609 aa17.49■□□□□ 0.39
LITAF-209ENST00000571688 LRRC43Q8N309 656 aa17.49■□□□□ 0.39
LITAF-209ENST00000571688 USP6NLQ92738 828 aa17.49■□□□□ 0.39
LITAF-209ENST00000571688 SENP6Q9GZR1 1112 aaPredicted RBP17.49■□□□□ 0.39
LITAF-209ENST00000571688 EFR3BQ9Y2G0 817 aa17.49■□□□□ 0.39
LITAF-209ENST00000571688 INPP5FQ9Y2H2 1132 aa17.49■□□□□ 0.39
LITAF-209ENST00000571688 TCRBV5S1A1TA0A578 114 aa17.48■□□□□ 0.39
LITAF-209ENST00000571688 CAPN8A6NHC0 703 aa17.48■□□□□ 0.39
LITAF-209ENST00000571688 DNAJA2O60884 412 aa17.48■□□□□ 0.39
LITAF-209ENST00000571688 CD48P09326 243 aa17.48■□□□□ 0.39
LITAF-209ENST00000571688 MMP8P22894 467 aa17.48■□□□□ 0.39
LITAF-209ENST00000571688 PMLP29590 882 aa17.48■□□□□ 0.39
LITAF-209ENST00000571688 YWHAGP61981 247 aaKnown RBP eCLIP17.48■□□□□ 0.39
LITAF-209ENST00000571688 DYNLT1P63172 113 aa17.48■□□□□ 0.39
LITAF-209ENST00000571688 DCTN2Q13561 401 aaKnown RBP17.48■□□□□ 0.39
LITAF-209ENST00000571688 KBTBD6Q86V97 674 aa17.48■□□□□ 0.39
LITAF-209ENST00000571688 UNC45BQ8IWX7 931 aa17.48■□□□□ 0.39
LITAF-209ENST00000571688 POU5F2Q8N7G0 328 aa17.48■□□□□ 0.39
LITAF-209ENST00000571688 TTC13Q8NBP0 860 aa17.48■□□□□ 0.39
LITAF-209ENST00000571688 MCEEQ96PE7 176 aa17.48■□□□□ 0.39
LITAF-209ENST00000571688 SIKE1Q9BRV8 207 aa17.48■□□□□ 0.39
LITAF-209ENST00000571688 ZNF180Q9UJW8 692 aa17.48■□□□□ 0.39
LITAF-209ENST00000571688 CCDC160A6NGH7 325 aa17.48■□□□□ 0.39
LITAF-209ENST00000571688 RFPL1O75677 317 aa17.48■□□□□ 0.39
LITAF-209ENST00000571688 KRT37O76014 449 aa17.48■□□□□ 0.39
LITAF-209ENST00000571688 KLHL2O95198 593 aa17.48■□□□□ 0.39
LITAF-209ENST00000571688 BPGMP07738 259 aa17.48■□□□□ 0.39
LITAF-209ENST00000571688 L1CAMP32004 1257 aa17.48■□□□□ 0.39
LITAF-209ENST00000571688 SCNN1DP51172 638 aa17.48■□□□□ 0.39
LITAF-209ENST00000571688 WDR44Q5JSH3 913 aa17.48■□□□□ 0.39
LITAF-209ENST00000571688 APOBEC3HQ6NTF7 200 aaKnown RBP17.48■□□□□ 0.39
LITAF-209ENST00000571688 ANO5Q75V66 913 aa17.48■□□□□ 0.39
LITAF-209ENST00000571688 ZNF554Q86TJ5 538 aa17.48■□□□□ 0.39
LITAF-209ENST00000571688 CCDC33Q8N5R6 958 aa17.48■□□□□ 0.39
LITAF-209ENST00000571688 CCDC124Q96CT7 223 aaKnown RBP17.48■□□□□ 0.39
LITAF-209ENST00000571688 DCUN1D1Q96GG9 259 aa17.48■□□□□ 0.39
LITAF-209ENST00000571688 KIFC3Q9BVG8 833 aa17.48■□□□□ 0.39
LITAF-209ENST00000571688 GRIP2Q9C0E4 1043 aa17.48■□□□□ 0.39
LITAF-209ENST00000571688 ZNF696Q9H7X3 374 aa17.48■□□□□ 0.39
LITAF-209ENST00000571688 TTLL3Q9Y4R7 772 aa17.48■□□□□ 0.39
LITAF-209ENST00000571688 KAT6AQ92794 2004 aa17.47■□□□□ 0.39
LITAF-209ENST00000571688 GNPATO15228 680 aa17.47■□□□□ 0.39
LITAF-209ENST00000571688 LYPLA2O95372 231 aa17.47■□□□□ 0.39
LITAF-209ENST00000571688 PROCP04070 461 aa17.47■□□□□ 0.39
LITAF-209ENST00000571688 ALDH1A3P47895 512 aa17.47■□□□□ 0.39
LITAF-209ENST00000571688 BASP1P80723 227 aaKnown RBP17.47■□□□□ 0.39
LITAF-209ENST00000571688 C1QTNF12Q5T7M4 302 aa17.47■□□□□ 0.39
LITAF-209ENST00000571688 SPOPLQ6IQ16 392 aa17.47■□□□□ 0.39
LITAF-209ENST00000571688 TATDN1Q6P1N9 297 aa17.47■□□□□ 0.39
LITAF-209ENST00000571688 BORAQ6PGQ7 559 aa17.47■□□□□ 0.39
LITAF-209ENST00000571688 DENND5BQ6ZUT9 1274 aa17.47■□□□□ 0.39
LITAF-209ENST00000571688 AHI1Q8N157 1196 aa17.47■□□□□ 0.39
LITAF-209ENST00000571688 GPD1LQ8N335 351 aa17.47■□□□□ 0.39
LITAF-209ENST00000571688 MXRA8Q9BRK3 442 aa17.47■□□□□ 0.39
LITAF-209ENST00000571688 PCDHB4Q9Y5E5 795 aa17.47■□□□□ 0.39
LITAF-209ENST00000571688 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.47■□□□□ 0.39
LITAF-209ENST00000571688 TMEM150BA6NC51 233 aa17.47■□□□□ 0.39
LITAF-209ENST00000571688 BIRC5O15392 142 aa17.47■□□□□ 0.39
LITAF-209ENST00000571688 HLA-DRAP01903 254 aa17.47■□□□□ 0.39
LITAF-209ENST00000571688 PCSK6P29122 969 aa17.47■□□□□ 0.39
LITAF-209ENST00000571688 GALK1P51570 392 aa17.47■□□□□ 0.39
LITAF-209ENST00000571688 STX3Q13277 289 aa17.47■□□□□ 0.39
LITAF-209ENST00000571688 TMEM270Q6UE05 265 aa17.47■□□□□ 0.39
LITAF-209ENST00000571688 BBS12Q6ZW61 710 aa17.47■□□□□ 0.39
LITAF-209ENST00000571688 MAP7D3Q8IWC1 876 aa17.47■□□□□ 0.39
LITAF-209ENST00000571688 APBB2Q92870 758 aa17.47■□□□□ 0.39
LITAF-209ENST00000571688 STN1Q9H668 368 aaKnown RBP17.47■□□□□ 0.39
LITAF-209ENST00000571688 XAB2Q9HCS7 855 aaKnown RBP17.47■□□□□ 0.39
LITAF-209ENST00000571688 THAP1Q9NVV9 213 aa17.47■□□□□ 0.39
LITAF-209ENST00000571688 DDTLA6NHG4 134 aaPredicted RBP17.46■□□□□ 0.39
LITAF-209ENST00000571688 CST8O60676 142 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms