RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 ITIH5Q86UX2 942 aa12.52□□□□□ -0.41
CDRT1-206ENST00000571263 MON1AQ86VX9 555 aa12.52□□□□□ -0.41
CDRT1-206ENST00000571263 NIPA2Q8N8Q9 360 aa12.52□□□□□ -0.41
CDRT1-206ENST00000571263 PDZD8Q8NEN9 1154 aa12.52□□□□□ -0.41
CDRT1-206ENST00000571263 OVCA2Q8WZ82 227 aa12.52□□□□□ -0.41
CDRT1-206ENST00000571263 PPP2R3CQ969Q6 453 aa12.52□□□□□ -0.41
CDRT1-206ENST00000571263 C16orf45Q96MC5 204 aaPredicted RBP12.52□□□□□ -0.41
CDRT1-206ENST00000571263 SEPT5Q99719 369 aaPredicted RBP12.52□□□□□ -0.41
CDRT1-206ENST00000571263 PLEKHA4Q9H4M7 779 aa12.52□□□□□ -0.41
CDRT1-206ENST00000571263 CYP4F11Q9HBI6 524 aa12.52□□□□□ -0.41
CDRT1-206ENST00000571263 POPDC2Q9HBU9 364 aa12.52□□□□□ -0.41
CDRT1-206ENST00000571263 IL37Q9NZH6 218 aa12.52□□□□□ -0.41
CDRT1-206ENST00000571263 PCDH10Q9P2E7 1040 aa12.52□□□□□ -0.41
CDRT1-206ENST00000571263 TRIM10Q9UDY6 481 aa12.52□□□□□ -0.41
CDRT1-206ENST00000571263 SALL4Q9UJQ4 1053 aa12.52□□□□□ -0.41
CDRT1-206ENST00000571263 TMEM59LQ9UK28 342 aa12.52□□□□□ -0.41
CDRT1-206ENST00000571263 STAP1Q9ULZ2 295 aa12.52□□□□□ -0.41
CDRT1-206ENST00000571263 SCML2Q9UQR0 700 aa12.52□□□□□ -0.41
CDRT1-206ENST00000571263 YBX2Q9Y2T7 364 aaKnown RBP12.52□□□□□ -0.41
CDRT1-206ENST00000571263 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.52□□□□□ -0.41
CDRT1-206ENST00000571263 A0A0U1RQJ8 604 aa12.51□□□□□ -0.41
CDRT1-206ENST00000571263 FAM92AA1XBS5 289 aa12.51□□□□□ -0.41
CDRT1-206ENST00000571263 C2orf71A6NGG8 1288 aa12.51□□□□□ -0.41
CDRT1-206ENST00000571263 CAPN9O14815 690 aa12.51□□□□□ -0.41
CDRT1-206ENST00000571263 BUB1BO60566 1050 aaPredicted RBP12.51□□□□□ -0.41
CDRT1-206ENST00000571263 PROSCO94903 275 aa12.51□□□□□ -0.41
CDRT1-206ENST00000571263 ABL1P00519 1130 aa12.51□□□□□ -0.41
CDRT1-206ENST00000571263 RPL17P18621 184 aaKnown RBP12.51□□□□□ -0.41
CDRT1-206ENST00000571263 YWHAQP27348 245 aa12.51□□□□□ -0.41
CDRT1-206ENST00000571263 SDC4P31431 198 aa12.51□□□□□ -0.41
CDRT1-206ENST00000571263 NOS2P35228 1153 aa12.51□□□□□ -0.41
CDRT1-206ENST00000571263 RFC1P35251 1148 aaPredicted RBP12.51□□□□□ -0.41
CDRT1-206ENST00000571263 PTPN9P43378 593 aa12.51□□□□□ -0.41
CDRT1-206ENST00000571263 ZNF143P52747 638 aaPredicted RBP12.51□□□□□ -0.41
CDRT1-206ENST00000571263 SLC5A3P53794 718 aa12.51□□□□□ -0.41
CDRT1-206ENST00000571263 CACNA2D1P54289 1103 aa12.51□□□□□ -0.41
CDRT1-206ENST00000571263 EPHB3P54753 998 aa12.51□□□□□ -0.41
CDRT1-206ENST00000571263 MESDQ14696 234 aa12.51□□□□□ -0.41
CDRT1-206ENST00000571263 TAF12Q16514 161 aa12.51□□□□□ -0.41
CDRT1-206ENST00000571263 CCDC142Q17RM4 750 aa12.51□□□□□ -0.41
CDRT1-206ENST00000571263 C2CD6Q53TS8 623 aa12.51□□□□□ -0.41
CDRT1-206ENST00000571263 FAM109BQ6ICB4 259 aaPredicted RBP12.51□□□□□ -0.41
CDRT1-206ENST00000571263 LILRA6Q6PI73 481 aa12.51□□□□□ -0.41
CDRT1-206ENST00000571263 DNAAF5Q86Y56 855 aa12.51□□□□□ -0.41
CDRT1-206ENST00000571263 SLC35F6Q8N357 371 aa12.51□□□□□ -0.41
CDRT1-206ENST00000571263 LRRC57Q8N9N7 239 aa12.51□□□□□ -0.41
CDRT1-206ENST00000571263 ATRIPQ8WXE1 791 aa12.51□□□□□ -0.41
CDRT1-206ENST00000571263 MCEEQ96PE7 176 aa12.51□□□□□ -0.41
CDRT1-206ENST00000571263 SLITRK1Q96PX8 696 aa12.51□□□□□ -0.41
CDRT1-206ENST00000571263 CDK5RAP1Q96SZ6 601 aaKnown RBP12.51□□□□□ -0.41
CDRT1-206ENST00000571263 NAPGQ99747 312 aaPredicted RBP12.51□□□□□ -0.41
CDRT1-206ENST00000571263 CNPY3Q9BT09 278 aa12.51□□□□□ -0.41
CDRT1-206ENST00000571263 ULBP1Q9BZM6 244 aa12.51□□□□□ -0.41
CDRT1-206ENST00000571263 NKX2-4Q9H2Z4 354 aa12.51□□□□□ -0.41
CDRT1-206ENST00000571263 METTL5Q9NRN9 209 aaKnown RBP12.51□□□□□ -0.41
CDRT1-206ENST00000571263 ABCC13Q9NSE7 274 aa12.51□□□□□ -0.41
CDRT1-206ENST00000571263 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.51□□□□□ -0.41
CDRT1-206ENST00000571263 UXTQ9UBK9 157 aaPredicted RBP12.51□□□□□ -0.41
CDRT1-206ENST00000571263 DNAI1Q9UI46 699 aa12.51□□□□□ -0.41
CDRT1-206ENST00000571263 COG5Q9UP83 839 aa12.51□□□□□ -0.41
CDRT1-206ENST00000571263 SLC27A5Q9Y2P5 690 aa12.51□□□□□ -0.41
CDRT1-206ENST00000571263 ALG6Q9Y672 507 aa12.51□□□□□ -0.41
CDRT1-206ENST00000571263 TMEM265A0A087WTH1 108 aa12.5□□□□□ -0.41
CDRT1-206ENST00000571263 CCDC66A2RUB6 948 aa12.5□□□□□ -0.41
CDRT1-206ENST00000571263 GRID2IPA4D2P6 1211 aa12.5□□□□□ -0.41
CDRT1-206ENST00000571263 C2CD4BA6NLJ0 364 aa12.5□□□□□ -0.41
CDRT1-206ENST00000571263 DPYSL4O14531 572 aa12.5□□□□□ -0.41
CDRT1-206ENST00000571263 GRM6O15303 877 aa12.5□□□□□ -0.41
CDRT1-206ENST00000571263 ADAM12O43184 909 aa12.5□□□□□ -0.41
CDRT1-206ENST00000571263 ATMINO43313 823 aaPredicted RBP12.5□□□□□ -0.41
CDRT1-206ENST00000571263 GLUD1P00367 558 aa12.5□□□□□ -0.41
CDRT1-206ENST00000571263 F9P00740 461 aa12.5□□□□□ -0.41
CDRT1-206ENST00000571263 PDGFRAP16234 1089 aa12.5□□□□□ -0.41
CDRT1-206ENST00000571263 PBX2P40425 430 aa12.5□□□□□ -0.41
CDRT1-206ENST00000571263 MATKP42679 507 aa12.5□□□□□ -0.41
CDRT1-206ENST00000571263 RPL7AP62424 266 aaKnown RBP12.5□□□□□ -0.41
CDRT1-206ENST00000571263 RPS6KA1Q15418 735 aa12.5□□□□□ -0.41
CDRT1-206ENST00000571263 CLUL1Q15846 466 aa12.5□□□□□ -0.41
CDRT1-206ENST00000571263 DDR2Q16832 855 aa12.5□□□□□ -0.41
CDRT1-206ENST00000571263 HADHQ16836 314 aaKnown RBP12.5□□□□□ -0.41
CDRT1-206ENST00000571263 LRIT3Q3SXY7 679 aa12.5□□□□□ -0.41
CDRT1-206ENST00000571263 MEI1Q5TIA1 1274 aa12.5□□□□□ -0.41
CDRT1-206ENST00000571263 SYT10Q6XYQ8 523 aa12.5□□□□□ -0.41
CDRT1-206ENST00000571263 TADA2BQ86TJ2 420 aa12.5□□□□□ -0.41
CDRT1-206ENST00000571263 ELMOD1Q8N336 334 aa12.5□□□□□ -0.41
CDRT1-206ENST00000571263 ZNF276Q8N554 614 aa12.5□□□□□ -0.41
CDRT1-206ENST00000571263 UBL4BQ8N7F7 174 aa12.5□□□□□ -0.41
CDRT1-206ENST00000571263 TIFAQ96CG3 184 aa12.5□□□□□ -0.41
CDRT1-206ENST00000571263 CDCA3Q99618 268 aaPredicted RBP12.5□□□□□ -0.41
CDRT1-206ENST00000571263 DDX23Q9BUQ8 820 aaKnown RBP12.5□□□□□ -0.41
CDRT1-206ENST00000571263 TTLL2Q9BWV7 592 aa12.5□□□□□ -0.41
CDRT1-206ENST00000571263 RHOBTB2Q9BYZ6 727 aa12.5□□□□□ -0.41
CDRT1-206ENST00000571263 IRX2Q9BZI1 471 aaPredicted RBP12.5□□□□□ -0.41
CDRT1-206ENST00000571263 PRO3102Q9H379 93 aa12.5□□□□□ -0.41
CDRT1-206ENST00000571263 TLR8Q9NR97 1041 aaKnown RBP12.5□□□□□ -0.41
CDRT1-206ENST00000571263 CLIC5Q9NZA1 410 aa12.5□□□□□ -0.41
CDRT1-206ENST00000571263 FBXW11Q9UKB1 542 aa12.5□□□□□ -0.41
CDRT1-206ENST00000571263 MTUS1Q9ULD2 1270 aa12.5□□□□□ -0.41
CDRT1-206ENST00000571263 CAPN6Q9Y6Q1 641 aa12.5□□□□□ -0.41
CDRT1-206ENST00000571263 NLRC5Q86WI3 1866 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms