RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 A0A1W2PRU2 124 aa14.14□□□□□ -0.15
CCDC40-205ENST00000571028 P4HA2O15460 535 aa14.14□□□□□ -0.15
CCDC40-205ENST00000571028 ATG13O75143 517 aa14.14□□□□□ -0.15
CCDC40-205ENST00000571028 SLC9A1P19634 815 aa14.14□□□□□ -0.15
CCDC40-205ENST00000571028 SPINK2P20155 84 aa14.14□□□□□ -0.15
CCDC40-205ENST00000571028 WARSP23381 471 aaKnown RBP14.14□□□□□ -0.15
CCDC40-205ENST00000571028 ASPAP45381 313 aa14.14□□□□□ -0.15
CCDC40-205ENST00000571028 LHX1P48742 406 aa14.14□□□□□ -0.15
CCDC40-205ENST00000571028 COPB1P53618 953 aaKnown RBP14.14□□□□□ -0.15
CCDC40-205ENST00000571028 TSPY1Q01534 308 aa14.14□□□□□ -0.15
CCDC40-205ENST00000571028 APBA1Q02410 837 aa14.14□□□□□ -0.15
CCDC40-205ENST00000571028 FCHO2Q0JRZ9 810 aa14.14□□□□□ -0.15
CCDC40-205ENST00000571028 PLD1Q13393 1074 aa14.14□□□□□ -0.15
CCDC40-205ENST00000571028 CCDC142Q17RM4 750 aa14.14□□□□□ -0.15
CCDC40-205ENST00000571028 ARHGAP29Q52LW3 1261 aa14.14□□□□□ -0.15
CCDC40-205ENST00000571028 ZNF394Q53GI3 561 aa14.14□□□□□ -0.15
CCDC40-205ENST00000571028 PLA2G2CQ5R387 149 aa14.14□□□□□ -0.15
CCDC40-205ENST00000571028 TCEAL6Q6IPX3 200 aa14.14□□□□□ -0.15
CCDC40-205ENST00000571028 TXNDC11Q6PKC3 985 aa14.14□□□□□ -0.15
CCDC40-205ENST00000571028 RNF19BQ6ZMZ0 732 aa14.14□□□□□ -0.15
CCDC40-205ENST00000571028 GBP6Q6ZN66 633 aa14.14□□□□□ -0.15
CCDC40-205ENST00000571028 RRAGAQ7L523 313 aa14.14□□□□□ -0.15
CCDC40-205ENST00000571028 LRRTM3Q86VH5 581 aa14.14□□□□□ -0.15
CCDC40-205ENST00000571028 ARHGEF19Q8IW93 802 aa14.14□□□□□ -0.15
CCDC40-205ENST00000571028 PPM1KQ8N3J5 372 aa14.14□□□□□ -0.15
CCDC40-205ENST00000571028 TCEAL3Q969E4 200 aa14.14□□□□□ -0.15
CCDC40-205ENST00000571028 PCMTD1Q96MG8 357 aaPredicted RBP14.14□□□□□ -0.15
CCDC40-205ENST00000571028 ARID3AQ99856 593 aa14.14□□□□□ -0.15
CCDC40-205ENST00000571028 HSD3B7Q9H2F3 369 aa14.14□□□□□ -0.15
CCDC40-205ENST00000571028 VRTNQ9H8Y1 702 aa14.14□□□□□ -0.15
CCDC40-205ENST00000571028 GTSE1Q9NYZ3 720 aa14.14□□□□□ -0.15
CCDC40-205ENST00000571028 AFF4Q9UHB7 1163 aaKnown RBP14.14□□□□□ -0.15
CCDC40-205ENST00000571028 LHX6Q9UPM6 363 aa14.14□□□□□ -0.15
CCDC40-205ENST00000571028 COQ4Q9Y3A0 265 aa14.14□□□□□ -0.15
CCDC40-205ENST00000571028 F5P12259 2224 aa14.14□□□□□ -0.15
CCDC40-205ENST00000571028 NCANO14594 1321 aa14.14□□□□□ -0.15
CCDC40-205ENST00000571028 NOTCH4Q99466 2003 aa14.14□□□□□ -0.15
CCDC40-205ENST00000571028 VWA8A3KMH1 1905 aa14.13□□□□□ -0.15
CCDC40-205ENST00000571028 COL4A2P08572 1712 aa14.13□□□□□ -0.15
CCDC40-205ENST00000571028 C4orf47A7E2U8 309 aa14.13□□□□□ -0.15
CCDC40-205ENST00000571028 TACC1O75410 805 aa14.13□□□□□ -0.15
CCDC40-205ENST00000571028 MOSPD3O75425 235 aa14.13□□□□□ -0.15
CCDC40-205ENST00000571028 RHOBTB1O94844 696 aa14.13□□□□□ -0.15
CCDC40-205ENST00000571028 ZNF18P17022 549 aa14.13□□□□□ -0.15
CCDC40-205ENST00000571028 PCSK1P29120 753 aa14.13□□□□□ -0.15
CCDC40-205ENST00000571028 NDST1P52848 882 aa14.13□□□□□ -0.15
CCDC40-205ENST00000571028 EPHA5P54756 1037 aa14.13□□□□□ -0.15
CCDC40-205ENST00000571028 CREB5Q02930 508 aa14.13□□□□□ -0.15
CCDC40-205ENST00000571028 CCINQ13939 588 aa14.13□□□□□ -0.15
CCDC40-205ENST00000571028 EXOC3L4Q17RC7 722 aa14.13□□□□□ -0.15
CCDC40-205ENST00000571028 FKBP15Q5T1M5 1219 aa14.13□□□□□ -0.15
CCDC40-205ENST00000571028 SH3PXD2AQ5TCZ1 1133 aa14.13□□□□□ -0.15
CCDC40-205ENST00000571028 GJB7Q6PEY0 223 aa14.13□□□□□ -0.15
CCDC40-205ENST00000571028 DCP1BQ8IZD4 617 aaKnown RBP14.13□□□□□ -0.15
CCDC40-205ENST00000571028 ATAD1Q8NBU5 361 aa14.13□□□□□ -0.15
CCDC40-205ENST00000571028 LMO3Q8TAP4 145 aa14.13□□□□□ -0.15
CCDC40-205ENST00000571028 SHKBP1Q8TBC3 707 aa14.13□□□□□ -0.15
CCDC40-205ENST00000571028 ZCCHC14Q8WYQ9 949 aaKnown RBP14.13□□□□□ -0.15
CCDC40-205ENST00000571028 KAT5Q92993 513 aa14.13□□□□□ -0.15
CCDC40-205ENST00000571028 ZFYVE19Q96K21 471 aa14.13□□□□□ -0.15
CCDC40-205ENST00000571028 SYT15Q9BQS2 421 aa14.13□□□□□ -0.15
CCDC40-205ENST00000571028 ZCWPW1Q9H0M4 648 aa14.13□□□□□ -0.15
CCDC40-205ENST00000571028 DPEP3Q9H4B8 488 aa14.13□□□□□ -0.15
CCDC40-205ENST00000571028 TMLHEQ9NVH6 421 aa14.13□□□□□ -0.15
CCDC40-205ENST00000571028 ABI2Q9NYB9 513 aaPredicted RBP14.13□□□□□ -0.15
CCDC40-205ENST00000571028 HMGXB4Q9UGU5 601 aa14.13□□□□□ -0.15
CCDC40-205ENST00000571028 LIMA1Q9UHB6 759 aaKnown RBP14.13□□□□□ -0.15
CCDC40-205ENST00000571028 GTF3C4Q9UKN8 822 aa14.13□□□□□ -0.15
CCDC40-205ENST00000571028 SLC27A5Q9Y2P5 690 aa14.13□□□□□ -0.15
CCDC40-205ENST00000571028 YIPF1Q9Y548 306 aa14.13□□□□□ -0.15
CCDC40-205ENST00000571028 NME7Q9Y5B8 376 aa14.13□□□□□ -0.15
CCDC40-205ENST00000571028 CNOT1A5YKK6 2376 aaKnown RBP14.13□□□□□ -0.15
CCDC40-205ENST00000571028 ASPMQ8IZT6 3477 aa14.12□□□□□ -0.15
CCDC40-205ENST00000571028 SRRM3A6NNA2 597 aaPredicted RBP14.12□□□□□ -0.15
CCDC40-205ENST00000571028 GABRDO14764 452 aa14.12□□□□□ -0.15
CCDC40-205ENST00000571028 GIPC1O14908 333 aa14.12□□□□□ -0.15
CCDC40-205ENST00000571028 CAVIN2O95810 425 aa14.12□□□□□ -0.15
CCDC40-205ENST00000571028 SERPINC1P01008 464 aa14.12□□□□□ -0.15
CCDC40-205ENST00000571028 HOXC13P31276 330 aa14.12□□□□□ -0.15
CCDC40-205ENST00000571028 EPHB3P54753 998 aa14.12□□□□□ -0.15
CCDC40-205ENST00000571028 ZNF445P59923 1031 aa14.12□□□□□ -0.15
CCDC40-205ENST00000571028 PLCB2Q00722 1185 aa14.12□□□□□ -0.15
CCDC40-205ENST00000571028 CYP27A1Q02318 531 aa14.12□□□□□ -0.15
CCDC40-205ENST00000571028 GRSF1Q12849 480 aaKnown RBP eCLIP14.12□□□□□ -0.15
CCDC40-205ENST00000571028 CUL2Q13617 745 aa14.12□□□□□ -0.15
CCDC40-205ENST00000571028 ARHGAP15Q53QZ3 475 aa14.12□□□□□ -0.15
CCDC40-205ENST00000571028 MDH1BQ5I0G3 518 aa14.12□□□□□ -0.15
CCDC40-205ENST00000571028 INTS6LQ5JSJ4 861 aaKnown RBP14.12□□□□□ -0.15
CCDC40-205ENST00000571028 LIMS2Q7Z4I7 341 aa14.12□□□□□ -0.15
CCDC40-205ENST00000571028 ACOT1Q86TX2 421 aa14.12□□□□□ -0.15
CCDC40-205ENST00000571028 GPIHBP1Q8IV16 184 aa14.12□□□□□ -0.15
CCDC40-205ENST00000571028 ARID3BQ8IVW6 561 aaPredicted RBP14.12□□□□□ -0.15
CCDC40-205ENST00000571028 TTC9BQ8N6N2 239 aa14.12□□□□□ -0.15
CCDC40-205ENST00000571028 RSPRY1Q96DX4 576 aa14.12□□□□□ -0.15
CCDC40-205ENST00000571028 SEPT5Q99719 369 aaPredicted RBP14.12□□□□□ -0.15
CCDC40-205ENST00000571028 ACBD6Q9BR61 282 aa14.12□□□□□ -0.15
CCDC40-205ENST00000571028 CYP3A43Q9HB55 503 aa14.12□□□□□ -0.15
CCDC40-205ENST00000571028 UBE2TQ9NPD8 197 aaPredicted RBP14.12□□□□□ -0.15
CCDC40-205ENST00000571028 THG1LQ9NWX6 298 aaKnown RBP14.12□□□□□ -0.15
CCDC40-205ENST00000571028 CDH9Q9ULB4 789 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms