RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 RPSAP08865 295 aaKnown RBP3.74□□□□□ -1.81
SMG6-208ENST00000570874 JMJD7P0C870 316 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 CTAGE8P0CG41 777 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 TMIGD3P0DMS9 266 aaPredicted RBP3.74□□□□□ -1.81
SMG6-208ENST00000570874 CCDC192P0DO97 292 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 MYBP10242 640 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 BCRP11274 1271 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 PCNAP12004 261 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 ACTN1P12814 892 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 PRLRP16471 622 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 BMP6P22004 513 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 CDH3P22223 829 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 PEX2P28328 305 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 TPP2P29144 1249 aaPredicted RBP3.74□□□□□ -1.81
SMG6-208ENST00000570874 EEF1DP29692 281 aaKnown RBP3.74□□□□□ -1.81
SMG6-208ENST00000570874 GDI1P31150 447 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 HOXA13P31271 388 aaPredicted RBP3.74□□□□□ -1.81
SMG6-208ENST00000570874 IGFALSP35858 605 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 SLC1A4P43007 532 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 AFMP43652 599 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 LIG3P49916 1009 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 CCT8P50990 548 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 ADCY7P51828 1080 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 AP3M2P53677 418 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 SLC12A3P55017 1021 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 HDAC4P56524 1084 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 IFI35P80217 286 aaPredicted RBP3.74□□□□□ -1.81
SMG6-208ENST00000570874 DR1Q01658 176 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 TLE2Q04725 743 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 YWHAHQ04917 246 aaPredicted RBP3.74□□□□□ -1.81
SMG6-208ENST00000570874 TRIM32Q13049 653 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 COASYQ13057 564 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 ZNF267Q14586 743 aaPredicted RBP3.74□□□□□ -1.81
SMG6-208ENST00000570874 PDCD11Q14690 1871 aaKnown RBP3.74□□□□□ -1.81
SMG6-208ENST00000570874 KARSQ15046 597 aaKnown RBP3.74□□□□□ -1.81
SMG6-208ENST00000570874 MAPKAPK3Q16644 382 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 LETM2Q2VYF4 491 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 TBC1D25Q3MII6 688 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 TDRD12Q587J7 1177 aaKnown RBP3.74□□□□□ -1.81
SMG6-208ENST00000570874 TRIM61Q5EBN2 209 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 FBXO48Q5FWF7 155 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 TOR1AIP1Q5JTV8 583 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 TCTE1Q5JU00 501 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 FAM26DQ5JW98 314 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 ANGEL2Q5VTE6 544 aaKnown RBP3.74□□□□□ -1.81
SMG6-208ENST00000570874 PM20D1Q6GTS8 502 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 ARHGAP11AQ6P4F7 1023 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 TMEM154Q6P9G4 183 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 USP17L6PQ6QN14 398 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 SLC30A10Q6XR72 485 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 CEP128Q6ZU80 1094 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 SV2BQ7L1I2 683 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 OVCH2Q7RTZ1 564 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 SLFN11Q7Z7L1 901 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 ADCK1Q86TW2 530 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 CTAGE6Q86UF2 777 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 FAM83AQ86UY5 434 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 FAM114A1Q8IWE2 563 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 DHX40Q8IX18 779 aaKnown RBP3.74□□□□□ -1.81
SMG6-208ENST00000570874 CTAGE4Q8IX94 777 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 SYTL1Q8IYJ3 562 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 THNSL1Q8IYQ7 743 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 ANKRD35Q8N283 1001 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 GALNT15Q8N3T1 639 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 C10orf53Q8N6V4 93 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 ANKS4BQ8N8V4 417 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 SIMC1Q8NDZ2 872 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 FAM13CQ8NE31 585 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 ARMC2Q8NEN0 867 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 CCDC26Q8TAB7 109 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 AGR3Q8TD06 166 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 TBCKQ8TEA7 893 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 PIGOQ8TEQ8 1089 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 GRK7Q8WTQ7 553 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 DCAF4Q8WV16 495 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 HTRA1Q92743 480 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 KRT35Q92764 455 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 KCNN1Q92952 543 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 AHCYL2Q96HN2 611 aaKnown RBP3.74□□□□□ -1.81
SMG6-208ENST00000570874 FAM167AQ96KS9 214 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 ART5Q96L15 291 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 TRIM47Q96LD4 638 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 CNOT6LQ96LI5 555 aaKnown RBP3.74□□□□□ -1.81
SMG6-208ENST00000570874 ATP6V0BQ99437 205 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 OCSTAMPQ9BR26 566 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 SYT17Q9BSW7 474 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 SPXQ9BT56 116 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 EMILIN2Q9BXX0 1053 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 GCOM2Q9BZD3 368 aaPredicted RBP3.74□□□□□ -1.81
SMG6-208ENST00000570874 ACPTQ9BZG2 426 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 TSPAN10Q9H1Z9 355 aaPredicted RBP3.74□□□□□ -1.81
SMG6-208ENST00000570874 XKR8Q9H6D3 395 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 TMEM165Q9HC07 324 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 TRIM39Q9HCM9 518 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 NPHS2Q9NP85 383 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.74□□□□□ -1.81
SMG6-208ENST00000570874 IARS2Q9NSE4 1012 aaKnown RBP3.74□□□□□ -1.81
SMG6-208ENST00000570874 SPTLC3Q9NUV7 552 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 ACTR3BQ9P1U1 418 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 GRHPRQ9UBQ7 328 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms