RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 WSB2Q9NYS7 404 aaPredicted RBP7.72□□□□□ -1.17
SMG6-205ENST00000570659 EIF2B4Q9UI10 523 aaKnown RBP7.72□□□□□ -1.17
SMG6-205ENST00000570659 SIX4Q9UIU6 781 aa7.72□□□□□ -1.17
SMG6-205ENST00000570659 COL27A1Q8IZC6 1860 aaPredicted RBP7.72□□□□□ -1.17
SMG6-205ENST00000570659 NBPF19A0A087WUL8 3843 aa7.71□□□□□ -1.17
SMG6-205ENST00000570659 TEP1Q99973 2627 aaKnown RBP7.71□□□□□ -1.17
SMG6-205ENST00000570659 ARID1BQ8NFD5 2236 aaPredicted RBP7.71□□□□□ -1.17
SMG6-205ENST00000570659 RELNP78509 3460 aa7.71□□□□□ -1.17
SMG6-205ENST00000570659 BSNQ9UPA5 3926 aa7.71□□□□□ -1.17
SMG6-205ENST00000570659 TBC1D3BA6NDS4 549 aa7.71□□□□□ -1.18
SMG6-205ENST00000570659 KPNA7A9QM74 516 aa7.71□□□□□ -1.18
SMG6-205ENST00000570659 H0Y8X5 98 aa7.71□□□□□ -1.18
SMG6-205ENST00000570659 COCHO43405 550 aa7.71□□□□□ -1.18
SMG6-205ENST00000570659 NCAM1P13591 858 aa7.71□□□□□ -1.18
SMG6-205ENST00000570659 BDNFP23560 247 aa7.71□□□□□ -1.18
SMG6-205ENST00000570659 ADSSP30520 456 aa7.71□□□□□ -1.18
SMG6-205ENST00000570659 POLR2BP30876 1174 aaKnown RBP7.71□□□□□ -1.18
SMG6-205ENST00000570659 NTSR1P30989 418 aa7.71□□□□□ -1.18
SMG6-205ENST00000570659 RDXP35241 583 aaKnown RBP7.71□□□□□ -1.18
SMG6-205ENST00000570659 MATR3P43243 847 aaKnown RBP eCLIP7.71□□□□□ -1.18
SMG6-205ENST00000570659 TNFRSF4P43489 277 aa7.71□□□□□ -1.18
SMG6-205ENST00000570659 TAF6P49848 677 aa7.71□□□□□ -1.18
SMG6-205ENST00000570659 FXR2P51116 673 aaKnown RBP eCLIP7.71□□□□□ -1.18
SMG6-205ENST00000570659 SLC12A3P55017 1021 aa7.71□□□□□ -1.18
SMG6-205ENST00000570659 CXADRP78310 365 aa7.71□□□□□ -1.18
SMG6-205ENST00000570659 NFKB2Q00653 900 aa7.71□□□□□ -1.18
SMG6-205ENST00000570659 KCNA1Q09470 495 aa7.71□□□□□ -1.18
SMG6-205ENST00000570659 TARDBPQ13148 414 aaKnown RBP eCLIP7.71□□□□□ -1.18
SMG6-205ENST00000570659 HNRNPDQ14103 355 aaKnown RBP7.71□□□□□ -1.18
SMG6-205ENST00000570659 KCNB1Q14721 858 aa7.71□□□□□ -1.18
SMG6-205ENST00000570659 SOWAHAQ2M3V2 549 aa7.71□□□□□ -1.18
SMG6-205ENST00000570659 FUT11Q495W5 492 aa7.71□□□□□ -1.18
SMG6-205ENST00000570659 DCAF12L1Q5VU92 463 aa7.71□□□□□ -1.18
SMG6-205ENST00000570659 LMBRD2Q68DH5 695 aaPredicted RBP7.71□□□□□ -1.18
SMG6-205ENST00000570659 KIAA1324Q6UXG2 1013 aaKnown RBP7.71□□□□□ -1.18
SMG6-205ENST00000570659 APBB1IPQ7Z5R6 666 aaPredicted RBP7.71□□□□□ -1.18
SMG6-205ENST00000570659 ERICH1Q86X53 443 aa7.71□□□□□ -1.18
SMG6-205ENST00000570659 GATAD2AQ86YP4 633 aa7.71□□□□□ -1.18
SMG6-205ENST00000570659 PDCD7Q8N8D1 485 aaKnown RBP7.71□□□□□ -1.18
SMG6-205ENST00000570659 C1orf127Q8N9H9 656 aa7.71□□□□□ -1.18
SMG6-205ENST00000570659 TERB1Q8NA31 727 aa7.71□□□□□ -1.18
SMG6-205ENST00000570659 C2orf15Q8WU43 125 aaKnown RBP7.71□□□□□ -1.18
SMG6-205ENST00000570659 LEO1Q8WVC0 666 aaPredicted RBP7.71□□□□□ -1.18
SMG6-205ENST00000570659 TTC9Q92623 222 aa7.71□□□□□ -1.18
SMG6-205ENST00000570659 ELMO3Q96BJ8 720 aa7.71□□□□□ -1.18
SMG6-205ENST00000570659 NAF1Q96HR8 494 aaKnown RBP7.71□□□□□ -1.18
SMG6-205ENST00000570659 GABRG3Q99928 467 aa7.71□□□□□ -1.18
SMG6-205ENST00000570659 MSTO1Q9BUK6 570 aa7.71□□□□□ -1.18
SMG6-205ENST00000570659 CLMPQ9H6B4 373 aa7.71□□□□□ -1.18
SMG6-205ENST00000570659 C6orf106Q9H6K1 298 aaPredicted RBP7.71□□□□□ -1.18
SMG6-205ENST00000570659 RPF1Q9H9Y2 349 aaKnown RBP7.71□□□□□ -1.18
SMG6-205ENST00000570659 CLEC4EQ9ULY5 219 aa7.71□□□□□ -1.18
SMG6-205ENST00000570659 PCDHB6Q9Y5E3 794 aa7.71□□□□□ -1.18
SMG6-205ENST00000570659 CYP46A1Q9Y6A2 500 aa7.71□□□□□ -1.18
SMG6-205ENST00000570659 CKAP5Q14008 2032 aa7.71□□□□□ -1.18
SMG6-205ENST00000570659 A0A1B0GTW7 788 aa7.7□□□□□ -1.18
SMG6-205ENST00000570659 PMS2P1A4D2B8 440 aa7.7□□□□□ -1.18
SMG6-205ENST00000570659 MYMKA6NI61 221 aa7.7□□□□□ -1.18
SMG6-205ENST00000570659 CLDN5O00501 218 aa7.7□□□□□ -1.18
SMG6-205ENST00000570659 GABRDO14764 452 aa7.7□□□□□ -1.18
SMG6-205ENST00000570659 WNT9AO14904 365 aa7.7□□□□□ -1.18
SMG6-205ENST00000570659 BRINP1O60477 761 aa7.7□□□□□ -1.18
SMG6-205ENST00000570659 PIGRP01833 764 aa7.7□□□□□ -1.18
SMG6-205ENST00000570659 CISD3P0C7P0 127 aa7.7□□□□□ -1.18
SMG6-205ENST00000570659 PLCG1P19174 1290 aa7.7□□□□□ -1.18
SMG6-205ENST00000570659 GUCY2CP25092 1073 aa7.7□□□□□ -1.18
SMG6-205ENST00000570659 PSMA5P28066 241 aa7.7□□□□□ -1.18
SMG6-205ENST00000570659 EIF2DP41214 584 aaKnown RBP7.7□□□□□ -1.18
SMG6-205ENST00000570659 TAF10Q12962 218 aa7.7□□□□□ -1.18
SMG6-205ENST00000570659 NR1H3Q13133 447 aa7.7□□□□□ -1.18
SMG6-205ENST00000570659 COLEC12Q5KU26 742 aa7.7□□□□□ -1.18
SMG6-205ENST00000570659 TTC38Q5R3I4 469 aa7.7□□□□□ -1.18
SMG6-205ENST00000570659 FAM171BQ6P995 826 aa7.7□□□□□ -1.18
SMG6-205ENST00000570659 SLC36A4Q6YBV0 504 aa7.7□□□□□ -1.18
SMG6-205ENST00000570659 LIMS2Q7Z4I7 341 aa7.7□□□□□ -1.18
SMG6-205ENST00000570659 DCP1BQ8IZD4 617 aaKnown RBP7.7□□□□□ -1.18
SMG6-205ENST00000570659 BHMTQ93088 406 aa7.7□□□□□ -1.18
SMG6-205ENST00000570659 REEP2Q9BRK0 252 aa7.7□□□□□ -1.18
SMG6-205ENST00000570659 TTLL2Q9BWV7 592 aa7.7□□□□□ -1.18
SMG6-205ENST00000570659 FGFBP2Q9BYJ0 223 aa7.7□□□□□ -1.18
SMG6-205ENST00000570659 DPEP3Q9H4B8 488 aa7.7□□□□□ -1.18
SMG6-205ENST00000570659 CCSER2Q9H7U1 834 aa7.7□□□□□ -1.18
SMG6-205ENST00000570659 USP36Q9P275 1121 aaKnown RBP7.7□□□□□ -1.18
SMG6-205ENST00000570659 ZMYM5Q9UJ78 669 aa7.7□□□□□ -1.18
SMG6-205ENST00000570659 RBM19Q9Y4C8 960 aaKnown RBP7.7□□□□□ -1.18
SMG6-205ENST00000570659 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.69□□□□□ -1.18
SMG6-205ENST00000570659 A0A1W2PNU3 283 aaPredicted RBP7.69□□□□□ -1.18
SMG6-205ENST00000570659 METTL12A8MUP2 240 aa7.69□□□□□ -1.18
SMG6-205ENST00000570659 MEI4A8MW99 385 aa7.69□□□□□ -1.18
SMG6-205ENST00000570659 F8VP50 259 aa7.69□□□□□ -1.18
SMG6-205ENST00000570659 HNRNPDLO14979 420 aaKnown RBP7.69□□□□□ -1.18
SMG6-205ENST00000570659 CASC3O15234 703 aaKnown RBP7.69□□□□□ -1.18
SMG6-205ENST00000570659 BCAT2O15382 392 aaPredicted RBP7.69□□□□□ -1.18
SMG6-205ENST00000570659 HOXC11O43248 304 aaPredicted RBP7.69□□□□□ -1.18
SMG6-205ENST00000570659 TBX18O95935 607 aa7.69□□□□□ -1.18
SMG6-205ENST00000570659 WNT1P04628 370 aa7.69□□□□□ -1.18
SMG6-205ENST00000570659 ITGB3P05106 788 aa7.69□□□□□ -1.18
SMG6-205ENST00000570659 ZNF883P0CG24 379 aa7.69□□□□□ -1.18
SMG6-205ENST00000570659 IRF1P10914 325 aa7.69□□□□□ -1.18
SMG6-205ENST00000570659 HLA-EP13747 358 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms