RNA–Protein interactions for RNA: ENST00000570616.1

SLC12A4-205, Transcript of solute carrier family 12 member 4, humanhuman

TSL 3

Gene SLC12A4, Length 406 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-205ENST00000570616 USP4Q13107 963 aa24.08■■□□□ 1.45
SLC12A4-205ENST00000570616 MLF2Q15773 248 aaPredicted RBP24.08■■□□□ 1.45
SLC12A4-205ENST00000570616 CNGA2Q16280 664 aa24.08■■□□□ 1.45
SLC12A4-205ENST00000570616 SKOR2Q2VWA4 1001 aaPredicted RBP24.08■■□□□ 1.45
SLC12A4-205ENST00000570616 SLC44A4Q53GD3 710 aa24.08■■□□□ 1.45
SLC12A4-205ENST00000570616 RAB41Q5JT25 222 aa24.08■■□□□ 1.45
SLC12A4-205ENST00000570616 CCDC186Q7Z3E2 898 aa24.08■■□□□ 1.45
SLC12A4-205ENST00000570616 SHDQ96IW2 340 aa24.08■■□□□ 1.45
SLC12A4-205ENST00000570616 ZSWIM1Q9BR11 485 aa24.08■■□□□ 1.45
SLC12A4-205ENST00000570616 HSD3B7Q9H2F3 369 aa24.08■■□□□ 1.45
SLC12A4-205ENST00000570616 TLR8Q9NR97 1041 aaKnown RBP24.08■■□□□ 1.45
SLC12A4-205ENST00000570616 LIMA1Q9UHB6 759 aaKnown RBP24.08■■□□□ 1.45
SLC12A4-205ENST00000570616 CHORDC1Q9UHD1 332 aaPredicted RBP24.08■■□□□ 1.45
SLC12A4-205ENST00000570616 PATJQ8NI35 1801 aa24.07■■□□□ 1.44
SLC12A4-205ENST00000570616 SYCE3A1L190 88 aa24.07■■□□□ 1.44
SLC12A4-205ENST00000570616 CYP26A1O43174 497 aa24.07■■□□□ 1.44
SLC12A4-205ENST00000570616 PLA2G4AP47712 749 aa24.07■■□□□ 1.44
SLC12A4-205ENST00000570616 ZNF77Q15935 545 aa24.07■■□□□ 1.44
SLC12A4-205ENST00000570616 ARHGAP44Q17R89 818 aa24.07■■□□□ 1.44
SLC12A4-205ENST00000570616 HECTD3Q5T447 861 aa24.07■■□□□ 1.44
SLC12A4-205ENST00000570616 IER5LQ5T953 404 aa24.07■■□□□ 1.44
SLC12A4-205ENST00000570616 CWF19L1Q69YN2 538 aaKnown RBP24.07■■□□□ 1.44
SLC12A4-205ENST00000570616 DPY19L2P1Q6NXN4 242 aa24.07■■□□□ 1.44
SLC12A4-205ENST00000570616 RIN3Q8TB24 985 aa24.07■■□□□ 1.44
SLC12A4-205ENST00000570616 VPS16Q9H269 839 aa24.07■■□□□ 1.44
SLC12A4-205ENST00000570616 TBC1D17Q9HA65 648 aa24.07■■□□□ 1.44
SLC12A4-205ENST00000570616 DNAJC12Q9UKB3 198 aa24.07■■□□□ 1.44
SLC12A4-205ENST00000570616 BECN2A8MW95 431 aa24.06■■□□□ 1.44
SLC12A4-205ENST00000570616 RFX1P22670 979 aa24.06■■□□□ 1.44
SLC12A4-205ENST00000570616 COPB1P53618 953 aaKnown RBP24.06■■□□□ 1.44
SLC12A4-205ENST00000570616 STARD6P59095 220 aa24.06■■□□□ 1.44
SLC12A4-205ENST00000570616 MTF1Q14872 753 aa24.06■■□□□ 1.44
SLC12A4-205ENST00000570616 FLCNQ8NFG4 579 aa24.06■■□□□ 1.44
SLC12A4-205ENST00000570616 RNF38Q9H0F5 515 aa24.06■■□□□ 1.44
SLC12A4-205ENST00000570616 HEBP1Q9NRV9 189 aa24.06■■□□□ 1.44
SLC12A4-205ENST00000570616 AJAP1Q9UKB5 411 aaPredicted RBP24.06■■□□□ 1.44
SLC12A4-205ENST00000570616 DENND4CQ5VZ89 1909 aa24.06■■□□□ 1.44
SLC12A4-205ENST00000570616 LRRC10BA6NIK2 292 aa24.05■■□□□ 1.44
SLC12A4-205ENST00000570616 SMTNL1A8MU46 457 aa24.05■■□□□ 1.44
SLC12A4-205ENST00000570616 M0QYV0 167 aa24.05■■□□□ 1.44
SLC12A4-205ENST00000570616 TULP2O00295 520 aa24.05■■□□□ 1.44
SLC12A4-205ENST00000570616 COCHO43405 550 aa24.05■■□□□ 1.44
SLC12A4-205ENST00000570616 ZNF165P49910 485 aa24.05■■□□□ 1.44
SLC12A4-205ENST00000570616 CLCN5P51795 746 aa24.05■■□□□ 1.44
SLC12A4-205ENST00000570616 MEA1Q16626 185 aa24.05■■□□□ 1.44
SLC12A4-205ENST00000570616 FKBP15Q5T1M5 1219 aa24.05■■□□□ 1.44
SLC12A4-205ENST00000570616 ASTLQ6HA08 431 aaPredicted RBP24.05■■□□□ 1.44
SLC12A4-205ENST00000570616 DHX40Q8IX18 779 aaKnown RBP24.05■■□□□ 1.44
SLC12A4-205ENST00000570616 UBA3Q8TBC4 463 aa24.05■■□□□ 1.44
SLC12A4-205ENST00000570616 SH3RF2Q8TEC5 729 aa24.05■■□□□ 1.44
SLC12A4-205ENST00000570616 ZFYVE19Q96K21 471 aa24.05■■□□□ 1.44
SLC12A4-205ENST00000570616 DDX23Q9BUQ8 820 aaKnown RBP24.05■■□□□ 1.44
SLC12A4-205ENST00000570616 LSM14BQ9BX40 385 aaKnown RBP24.05■■□□□ 1.44
SLC12A4-205ENST00000570616 CYLDQ9NQC7 956 aa24.05■■□□□ 1.44
SLC12A4-205ENST00000570616 LGALS16A8MUM7 142 aa24.04■■□□□ 1.44
SLC12A4-205ENST00000570616 TLR5O60602 858 aa24.04■■□□□ 1.44
SLC12A4-205ENST00000570616 CALCAP01258 141 aa24.04■■□□□ 1.44
SLC12A4-205ENST00000570616 CDK11BP21127 795 aaKnown RBP24.04■■□□□ 1.44
SLC12A4-205ENST00000570616 PGFP49763 221 aa24.04■■□□□ 1.44
SLC12A4-205ENST00000570616 PSEN1P49768 467 aa24.04■■□□□ 1.44
SLC12A4-205ENST00000570616 KLHDC7AQ5VTJ3 777 aa24.04■■□□□ 1.44
SLC12A4-205ENST00000570616 CC2D1AQ6P1N0 951 aaPredicted RBP24.04■■□□□ 1.44
SLC12A4-205ENST00000570616 TPRG1Q6ZUI0 275 aa24.04■■□□□ 1.44
SLC12A4-205ENST00000570616 KIAA1958Q8N8K9 716 aa24.04■■□□□ 1.44
SLC12A4-205ENST00000570616 CSGALNACT1Q8TDX6 532 aa24.04■■□□□ 1.44
SLC12A4-205ENST00000570616 KCTD13Q8WZ19 329 aa24.04■■□□□ 1.44
SLC12A4-205ENST00000570616 SECISBP2LQ93073 1101 aaKnown RBP24.04■■□□□ 1.44
SLC12A4-205ENST00000570616 FAM83CQ9BQN1 747 aa24.04■■□□□ 1.44
SLC12A4-205ENST00000570616 CCSER2Q9H7U1 834 aa24.04■■□□□ 1.44
SLC12A4-205ENST00000570616 PLCB1Q9NQ66 1216 aa24.04■■□□□ 1.44
SLC12A4-205ENST00000570616 CPQQ9Y646 472 aa24.04■■□□□ 1.44
SLC12A4-205ENST00000570616 TRIOO75962 3097 aa24.04■■□□□ 1.44
SLC12A4-205ENST00000570616 MED7O43513 233 aa24.03■■□□□ 1.44
SLC12A4-205ENST00000570616 MBL2P11226 248 aaPredicted RBP24.03■■□□□ 1.44
SLC12A4-205ENST00000570616 GLULP15104 373 aa24.03■■□□□ 1.44
SLC12A4-205ENST00000570616 AOC1P19801 751 aa24.03■■□□□ 1.44
SLC12A4-205ENST00000570616 GNA15P30679 374 aa24.03■■□□□ 1.44
SLC12A4-205ENST00000570616 USP8P40818 1118 aa24.03■■□□□ 1.44
SLC12A4-205ENST00000570616 TKTL1P51854 596 aa24.03■■□□□ 1.44
SLC12A4-205ENST00000570616 VCPP55072 806 aaKnown RBP24.03■■□□□ 1.44
SLC12A4-205ENST00000570616 MLLT6P55198 1093 aaPredicted RBP24.03■■□□□ 1.44
SLC12A4-205ENST00000570616 ZXDBP98169 803 aa24.03■■□□□ 1.44
SLC12A4-205ENST00000570616 APTXQ7Z2E3 356 aaKnown RBP24.03■■□□□ 1.44
SLC12A4-205ENST00000570616 DDX42Q86XP3 938 aaKnown RBP eCLIP24.03■■□□□ 1.44
SLC12A4-205ENST00000570616 SLC35F5Q8WV83 523 aa24.03■■□□□ 1.44
SLC12A4-205ENST00000570616 MSANTD3Q96H12 275 aa24.03■■□□□ 1.44
SLC12A4-205ENST00000570616 NMUR1Q9HB89 426 aa24.03■■□□□ 1.44
SLC12A4-205ENST00000570616 LRRC4Q9HBW1 653 aa24.03■■□□□ 1.44
SLC12A4-205ENST00000570616 GKN1Q9NS71 199 aa24.03■■□□□ 1.44
SLC12A4-205ENST00000570616 OSER1Q9NX31 292 aa24.03■■□□□ 1.44
SLC12A4-205ENST00000570616 FHOD1Q9Y613 1164 aa24.03■■□□□ 1.44
SLC12A4-205ENST00000570616 COL4A2P08572 1712 aa24.02■■□□□ 1.44
SLC12A4-205ENST00000570616 A0A1W2PQH9 124 aa24.02■■□□□ 1.44
SLC12A4-205ENST00000570616 KANSL1LA0AUZ9 987 aa24.02■■□□□ 1.44
SLC12A4-205ENST00000570616 LEFTY2O00292 366 aa24.02■■□□□ 1.44
SLC12A4-205ENST00000570616 UCHL3P15374 230 aa24.02■■□□□ 1.44
SLC12A4-205ENST00000570616 PDGFRLQ15198 375 aa24.02■■□□□ 1.44
SLC12A4-205ENST00000570616 PM20D1Q6GTS8 502 aa24.02■■□□□ 1.44
SLC12A4-205ENST00000570616 KLHDC10Q6PID8 442 aa24.02■■□□□ 1.44
SLC12A4-205ENST00000570616 SCD5Q86SK9 330 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms