RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 PSAPL1Q6NUJ1 521 aa9.15□□□□□ -0.94
CTDNEP1-203ENST00000570385 ACOT1Q86TX2 421 aa9.15□□□□□ -0.94
CTDNEP1-203ENST00000570385 NUP93Q8N1F7 819 aa9.15□□□□□ -0.94
CTDNEP1-203ENST00000570385 FRMD1Q8N878 549 aa9.15□□□□□ -0.94
CTDNEP1-203ENST00000570385 TXNDC5Q8NBS9 432 aaKnown RBP9.15□□□□□ -0.94
CTDNEP1-203ENST00000570385 DDX1Q92499 740 aaKnown RBP9.15□□□□□ -0.94
CTDNEP1-203ENST00000570385 FBXO32Q969P5 355 aa9.15□□□□□ -0.94
CTDNEP1-203ENST00000570385 WBP2Q969T9 261 aa9.15□□□□□ -0.94
CTDNEP1-203ENST00000570385 SLITRK1Q96PX8 696 aa9.15□□□□□ -0.94
CTDNEP1-203ENST00000570385 PNKPQ96T60 521 aa9.15□□□□□ -0.94
CTDNEP1-203ENST00000570385 EDEM2Q9BV94 578 aa9.15□□□□□ -0.94
CTDNEP1-203ENST00000570385 SDCBP2Q9H190 292 aa9.15□□□□□ -0.94
CTDNEP1-203ENST00000570385 CCSER2Q9H7U1 834 aa9.15□□□□□ -0.94
CTDNEP1-203ENST00000570385 EHD2Q9NZN4 543 aa9.15□□□□□ -0.94
CTDNEP1-203ENST00000570385 EBF1Q9UH73 591 aa9.15□□□□□ -0.94
CTDNEP1-203ENST00000570385 PCDHA7Q9UN72 937 aa9.15□□□□□ -0.94
CTDNEP1-203ENST00000570385 CEP295Q9C0D2 2601 aa9.15□□□□□ -0.95
CTDNEP1-203ENST00000570385 USP24Q9UPU5 2620 aa9.15□□□□□ -0.95
CTDNEP1-203ENST00000570385 PI4KAP42356 2102 aa9.14□□□□□ -0.95
CTDNEP1-203ENST00000570385 MYH10P35580 1976 aa9.14□□□□□ -0.95
CTDNEP1-203ENST00000570385 LRRIQ3A6PVS8 624 aaPredicted RBP9.14□□□□□ -0.95
CTDNEP1-203ENST00000570385 SLC9A3R1O14745 358 aaPredicted RBP9.14□□□□□ -0.95
CTDNEP1-203ENST00000570385 TRIM24O15164 1050 aa9.14□□□□□ -0.95
CTDNEP1-203ENST00000570385 KAT7O95251 611 aa9.14□□□□□ -0.95
CTDNEP1-203ENST00000570385 KCNK5O95279 499 aa9.14□□□□□ -0.95
CTDNEP1-203ENST00000570385 YEATS4O95619 227 aa9.14□□□□□ -0.95
CTDNEP1-203ENST00000570385 OLFM2O95897 454 aa9.14□□□□□ -0.95
CTDNEP1-203ENST00000570385 APODP05090 189 aa9.14□□□□□ -0.95
CTDNEP1-203ENST00000570385 ADH5P11766 374 aa9.14□□□□□ -0.95
CTDNEP1-203ENST00000570385 CCDC130P13994 396 aa9.14□□□□□ -0.95
CTDNEP1-203ENST00000570385 WASP42768 502 aa9.14□□□□□ -0.95
CTDNEP1-203ENST00000570385 PPP3CCP48454 512 aa9.14□□□□□ -0.95
CTDNEP1-203ENST00000570385 PGFP49763 221 aa9.14□□□□□ -0.95
CTDNEP1-203ENST00000570385 SLC5A3P53794 718 aa9.14□□□□□ -0.95
CTDNEP1-203ENST00000570385 DLG4P78352 724 aa9.14□□□□□ -0.95
CTDNEP1-203ENST00000570385 NCOA4Q13772 614 aa9.14□□□□□ -0.95
CTDNEP1-203ENST00000570385 PKP1Q13835 747 aa9.14□□□□□ -0.95
CTDNEP1-203ENST00000570385 KNOP1Q1ED39 458 aaKnown RBP9.14□□□□□ -0.95
CTDNEP1-203ENST00000570385 ZNF667Q5HYK9 610 aa9.14□□□□□ -0.95
CTDNEP1-203ENST00000570385 HECTD3Q5T447 861 aa9.14□□□□□ -0.95
CTDNEP1-203ENST00000570385 CNNM4Q6P4Q7 775 aa9.14□□□□□ -0.95
CTDNEP1-203ENST00000570385 PAQR9Q6ZVX9 377 aa9.14□□□□□ -0.95
CTDNEP1-203ENST00000570385 FAM35AQ86V20 835 aa9.14□□□□□ -0.95
CTDNEP1-203ENST00000570385 PGBD3Q8N328 593 aa9.14□□□□□ -0.95
CTDNEP1-203ENST00000570385 DEFB119Q8N690 84 aa9.14□□□□□ -0.95
CTDNEP1-203ENST00000570385 IL17RCQ8NAC3 791 aa9.14□□□□□ -0.95
CTDNEP1-203ENST00000570385 HMGB4Q8WW32 186 aa9.14□□□□□ -0.95
CTDNEP1-203ENST00000570385 PIGKQ92643 395 aa9.14□□□□□ -0.95
CTDNEP1-203ENST00000570385 SYAP1Q96A49 352 aaPredicted RBP9.14□□□□□ -0.95
CTDNEP1-203ENST00000570385 JAKMIP2Q96AA8 810 aa9.14□□□□□ -0.95
CTDNEP1-203ENST00000570385 CNOT6LQ96LI5 555 aaKnown RBP9.14□□□□□ -0.95
CTDNEP1-203ENST00000570385 LSM14BQ9BX40 385 aaKnown RBP9.14□□□□□ -0.95
CTDNEP1-203ENST00000570385 BACH2Q9BYV9 841 aa9.14□□□□□ -0.95
CTDNEP1-203ENST00000570385 ARHGEF4Q9NR80 690 aa9.14□□□□□ -0.95
CTDNEP1-203ENST00000570385 KRT82Q9NSB4 513 aa9.14□□□□□ -0.95
CTDNEP1-203ENST00000570385 FAM49BQ9NUQ9 324 aa9.14□□□□□ -0.95
CTDNEP1-203ENST00000570385 FAM13BQ9NYF5 915 aa9.14□□□□□ -0.95
CTDNEP1-203ENST00000570385 GMIPQ9P107 970 aa9.14□□□□□ -0.95
CTDNEP1-203ENST00000570385 BCCIPQ9P287 314 aaKnown RBP eCLIP9.14□□□□□ -0.95
CTDNEP1-203ENST00000570385 HMGXB4Q9UGU5 601 aa9.14□□□□□ -0.95
CTDNEP1-203ENST00000570385 SERTAD1Q9UHV2 236 aa9.14□□□□□ -0.95
CTDNEP1-203ENST00000570385 ANGPTL2Q9UKU9 493 aa9.14□□□□□ -0.95
CTDNEP1-203ENST00000570385 MMP17Q9ULZ9 603 aa9.14□□□□□ -0.95
CTDNEP1-203ENST00000570385 KIAA1549LQ6ZVL6 1849 aa9.14□□□□□ -0.95
CTDNEP1-203ENST00000570385 UBE4BO95155 1302 aa9.13□□□□□ -0.95
CTDNEP1-203ENST00000570385 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.13□□□□□ -0.95
CTDNEP1-203ENST00000570385 TCRBV21S2A2A0A5A6 115 aa9.13□□□□□ -0.95
CTDNEP1-203ENST00000570385 LNP1A1A4G5 178 aa9.13□□□□□ -0.95
CTDNEP1-203ENST00000570385 TBC1D3BA6NDS4 549 aa9.13□□□□□ -0.95
CTDNEP1-203ENST00000570385 KHNYNO15037 678 aaKnown RBP9.13□□□□□ -0.95
CTDNEP1-203ENST00000570385 MAP3K13O43283 966 aa9.13□□□□□ -0.95
CTDNEP1-203ENST00000570385 ADAM23O75077 832 aa9.13□□□□□ -0.95
CTDNEP1-203ENST00000570385 AP1G2O75843 785 aa9.13□□□□□ -0.95
CTDNEP1-203ENST00000570385 BEST1O76090 585 aa9.13□□□□□ -0.95
CTDNEP1-203ENST00000570385 RTN3O95197 1032 aaPredicted RBP9.13□□□□□ -0.95
CTDNEP1-203ENST00000570385 VNN1O95497 513 aa9.13□□□□□ -0.95
CTDNEP1-203ENST00000570385 TBX18O95935 607 aa9.13□□□□□ -0.95
CTDNEP1-203ENST00000570385 ADH1CP00326 375 aa9.13□□□□□ -0.95
CTDNEP1-203ENST00000570385 C4BPAP04003 597 aaKnown RBP9.13□□□□□ -0.95
CTDNEP1-203ENST00000570385 HSP90AA1P07900 732 aaKnown RBP9.13□□□□□ -0.95
CTDNEP1-203ENST00000570385 ZSCAN22P10073 491 aaPredicted RBP9.13□□□□□ -0.95
CTDNEP1-203ENST00000570385 PFKLP17858 780 aa9.13□□□□□ -0.95
CTDNEP1-203ENST00000570385 PMLP29590 882 aa9.13□□□□□ -0.95
CTDNEP1-203ENST00000570385 ATICP31939 592 aa9.13□□□□□ -0.95
CTDNEP1-203ENST00000570385 NOVA1P51513 510 aaKnown RBP9.13□□□□□ -0.95
CTDNEP1-203ENST00000570385 IRX4P78413 519 aa9.13□□□□□ -0.95
CTDNEP1-203ENST00000570385 MRPS21P82921 87 aaKnown RBP9.13□□□□□ -0.95
CTDNEP1-203ENST00000570385 STK4Q13043 487 aa9.13□□□□□ -0.95
CTDNEP1-203ENST00000570385 BMT2Q1RMZ1 405 aa9.13□□□□□ -0.95
CTDNEP1-203ENST00000570385 ANO4Q32M45 955 aa9.13□□□□□ -0.95
CTDNEP1-203ENST00000570385 UAP1L1Q3KQV9 507 aa9.13□□□□□ -0.95
CTDNEP1-203ENST00000570385 RESP18Q5W5W9 173 aa9.13□□□□□ -0.95
CTDNEP1-203ENST00000570385 PMS2CLQ68D20 193 aa9.13□□□□□ -0.95
CTDNEP1-203ENST00000570385 SPOPLQ6IQ16 392 aa9.13□□□□□ -0.95
CTDNEP1-203ENST00000570385 CYP2U1Q7Z449 544 aa9.13□□□□□ -0.95
CTDNEP1-203ENST00000570385 RASSF3Q86WH2 238 aa9.13□□□□□ -0.95
CTDNEP1-203ENST00000570385 TMEM25Q86YD3 366 aa9.13□□□□□ -0.95
CTDNEP1-203ENST00000570385 BBS7Q8IWZ6 715 aa9.13□□□□□ -0.95
CTDNEP1-203ENST00000570385 TMEFF1Q8IYR6 380 aa9.13□□□□□ -0.95
CTDNEP1-203ENST00000570385 FUKQ8N0W3 1084 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms