RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 ABLIM3O94929 683 aa5.69□□□□□ -1.5
CHD9-220ENST00000569794 A1BGP04217 495 aa5.69□□□□□ -1.5
CHD9-220ENST00000569794 ALPLP05186 524 aa5.69□□□□□ -1.5
CHD9-220ENST00000569794 TYRP14679 529 aa5.69□□□□□ -1.5
CHD9-220ENST00000569794 FPR3P25089 353 aa5.69□□□□□ -1.5
CHD9-220ENST00000569794 HOXD9P28356 352 aaPredicted RBP5.69□□□□□ -1.5
CHD9-220ENST00000569794 MAN1A1P33908 653 aa5.69□□□□□ -1.5
CHD9-220ENST00000569794 EXOSC9Q06265 439 aaKnown RBP5.69□□□□□ -1.5
CHD9-220ENST00000569794 MTMR1Q13613 665 aa5.69□□□□□ -1.5
CHD9-220ENST00000569794 FAM187BQ17R55 369 aa5.69□□□□□ -1.5
CHD9-220ENST00000569794 LEXMQ3ZCV2 418 aa5.69□□□□□ -1.5
CHD9-220ENST00000569794 FAM102BQ5T8I3 360 aa5.69□□□□□ -1.5
CHD9-220ENST00000569794 DLK2Q6UY11 383 aa5.69□□□□□ -1.5
CHD9-220ENST00000569794 TCEAL8Q8IYN2 117 aa5.69□□□□□ -1.5
CHD9-220ENST00000569794 ACRBPQ8NEB7 543 aa5.69□□□□□ -1.5
CHD9-220ENST00000569794 RTFDC1Q9BY42 306 aaPredicted RBP5.69□□□□□ -1.5
CHD9-220ENST00000569794 CCDC8Q9H0W5 538 aaPredicted RBP5.69□□□□□ -1.5
CHD9-220ENST00000569794 FOXP1Q9H334 677 aaPredicted RBP5.69□□□□□ -1.5
CHD9-220ENST00000569794 EXOC5O00471 708 aa5.68□□□□□ -1.5
CHD9-220ENST00000569794 GABRDO14764 452 aa5.68□□□□□ -1.5
CHD9-220ENST00000569794 CT47B1P0C2W7 299 aaPredicted RBP5.68□□□□□ -1.5
CHD9-220ENST00000569794 KCNJ5P48544 419 aa5.68□□□□□ -1.5
CHD9-220ENST00000569794 GHRHRQ02643 423 aa5.68□□□□□ -1.5
CHD9-220ENST00000569794 PICALMQ13492 652 aa5.68□□□□□ -1.5
CHD9-220ENST00000569794 MORC3Q14149 939 aa5.68□□□□□ -1.5
CHD9-220ENST00000569794 ODF1Q14990 250 aa5.68□□□□□ -1.5
CHD9-220ENST00000569794 RNASE12Q5GAN4 147 aaKnown RBP5.68□□□□□ -1.5
CHD9-220ENST00000569794 EMC10Q5UCC4 262 aa5.68□□□□□ -1.5
CHD9-220ENST00000569794 ANO1Q5XXA6 986 aa5.68□□□□□ -1.5
CHD9-220ENST00000569794 IL31Q6EBC2 164 aa5.68□□□□□ -1.5
CHD9-220ENST00000569794 ZNF280DQ6N043 979 aa5.68□□□□□ -1.5
CHD9-220ENST00000569794 C9orf47Q6ZRZ4 202 aa5.68□□□□□ -1.5
CHD9-220ENST00000569794 PNMA8AQ86V59 439 aaPredicted RBP5.68□□□□□ -1.5
CHD9-220ENST00000569794 DGKHQ86XP1 1220 aa5.68□□□□□ -1.5
CHD9-220ENST00000569794 SPICE1Q8N0Z3 855 aa5.68□□□□□ -1.5
CHD9-220ENST00000569794 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.68□□□□□ -1.5
CHD9-220ENST00000569794 ZNF398Q8TD17 642 aa5.68□□□□□ -1.5
CHD9-220ENST00000569794 CHMP4CQ96CF2 233 aa5.68□□□□□ -1.5
CHD9-220ENST00000569794 LYZL4Q96KX0 146 aa5.68□□□□□ -1.5
CHD9-220ENST00000569794 NAP1L5Q96NT1 182 aaPredicted RBP5.68□□□□□ -1.5
CHD9-220ENST00000569794 LMBRD1Q9NUN5 540 aa5.68□□□□□ -1.5
CHD9-220ENST00000569794 PCDHA1Q9Y5I3 950 aa5.68□□□□□ -1.5
CHD9-220ENST00000569794 VSTM5A8MXK1 200 aa5.67□□□□□ -1.5
CHD9-220ENST00000569794 TMEM232C9JQI7 657 aa5.67□□□□□ -1.5
CHD9-220ENST00000569794 PRPF3O43395 683 aaKnown RBP5.67□□□□□ -1.5
CHD9-220ENST00000569794 UNC5CO95185 931 aa5.67□□□□□ -1.5
CHD9-220ENST00000569794 FTLP02792 175 aaPredicted RBP5.67□□□□□ -1.5
CHD9-220ENST00000569794 PRKCBP05771 671 aa5.67□□□□□ -1.5
CHD9-220ENST00000569794 CSF1RP07333 972 aa5.67□□□□□ -1.5
CHD9-220ENST00000569794 VIPR2P41587 438 aa5.67□□□□□ -1.5
CHD9-220ENST00000569794 PPM1FP49593 454 aaPredicted RBP5.67□□□□□ -1.5
CHD9-220ENST00000569794 NEK3P51956 506 aa5.67□□□□□ -1.5
CHD9-220ENST00000569794 SRSF1Q07955 248 aaKnown RBP eCLIP5.67□□□□□ -1.5
CHD9-220ENST00000569794 MAPRE1Q15691 268 aaKnown RBP5.67□□□□□ -1.5
CHD9-220ENST00000569794 CYP1B1Q16678 543 aa5.67□□□□□ -1.5
CHD9-220ENST00000569794 AMOTQ4VCS5 1084 aa5.67□□□□□ -1.5
CHD9-220ENST00000569794 NXNQ6DKJ4 435 aa5.67□□□□□ -1.5
CHD9-220ENST00000569794 BCDIN3DQ7Z5W3 292 aaKnown RBP5.67□□□□□ -1.5
CHD9-220ENST00000569794 PIP4P1Q86T03 277 aa5.67□□□□□ -1.5
CHD9-220ENST00000569794 MAGEB6Q8N7X4 407 aa5.67□□□□□ -1.5
CHD9-220ENST00000569794 PCSK9Q8NBP7 692 aaKnown RBP5.67□□□□□ -1.5
CHD9-220ENST00000569794 ADAMTS18Q8TE60 1221 aa5.67□□□□□ -1.5
CHD9-220ENST00000569794 RUNDC1Q96C34 613 aa5.67□□□□□ -1.5
CHD9-220ENST00000569794 FAM167AQ96KS9 214 aa5.67□□□□□ -1.5
CHD9-220ENST00000569794 FYTTD1Q96QD9 318 aaKnown RBP5.67□□□□□ -1.5
CHD9-220ENST00000569794 ASIC5Q9NY37 505 aa5.67□□□□□ -1.5
CHD9-220ENST00000569794 TFCP2L1Q9NZI6 479 aa5.67□□□□□ -1.5
CHD9-220ENST00000569794 SCINQ9Y6U3 715 aa5.67□□□□□ -1.5
CHD9-220ENST00000569794 FAM90A8PA6NJQ4 464 aa5.66□□□□□ -1.5
CHD9-220ENST00000569794 hCG_1984214I3L0E3 225 aa5.66□□□□□ -1.5
CHD9-220ENST00000569794 TCEA3O75764 348 aa5.66□□□□□ -1.5
CHD9-220ENST00000569794 ZRANB2O95218 330 aaKnown RBP eCLIP5.66□□□□□ -1.5
CHD9-220ENST00000569794 FAM90A13PP0C7W8 464 aa5.66□□□□□ -1.5
CHD9-220ENST00000569794 FAM90A24PP0C7X0 464 aa5.66□□□□□ -1.5
CHD9-220ENST00000569794 HTR6P50406 440 aa5.66□□□□□ -1.5
CHD9-220ENST00000569794 PDE6CP51160 858 aa5.66□□□□□ -1.5
CHD9-220ENST00000569794 ERV3-1Q14264 604 aa5.66□□□□□ -1.5
CHD9-220ENST00000569794 TMEM95Q3KNT9 176 aa5.66□□□□□ -1.5
CHD9-220ENST00000569794 DEPDC1Q5TB30 811 aa5.66□□□□□ -1.5
CHD9-220ENST00000569794 SLC15A3Q8IY34 581 aa5.66□□□□□ -1.5
CHD9-220ENST00000569794 SMAP1Q8IYB5 467 aaPredicted RBP5.66□□□□□ -1.5
CHD9-220ENST00000569794 MIER2Q8N344 545 aa5.66□□□□□ -1.5
CHD9-220ENST00000569794 ANKRD42Q8N9B4 389 aa5.66□□□□□ -1.5
CHD9-220ENST00000569794 VPS37AQ8NEZ2 397 aa5.66□□□□□ -1.5
CHD9-220ENST00000569794 JPH3Q8WXH2 748 aaPredicted RBP5.66□□□□□ -1.5
CHD9-220ENST00000569794 MOGAT1Q96PD6 335 aa5.66□□□□□ -1.5
CHD9-220ENST00000569794 SIGLEC11Q96RL6 698 aa5.66□□□□□ -1.5
CHD9-220ENST00000569794 AS3MTQ9HBK9 375 aa5.66□□□□□ -1.5
CHD9-220ENST00000569794 SHOC2Q9UQ13 582 aa5.66□□□□□ -1.5
CHD9-220ENST00000569794 MRPS17Q9Y2R5 130 aaKnown RBP5.66□□□□□ -1.5
CHD9-220ENST00000569794 CFAP69A5D8W1 941 aa5.65□□□□□ -1.5
CHD9-220ENST00000569794 BTBD19C9JJ37 291 aa5.65□□□□□ -1.5
CHD9-220ENST00000569794 MYL3P08590 195 aa5.65□□□□□ -1.5
CHD9-220ENST00000569794 MYCLP12524 364 aaPredicted RBP5.65□□□□□ -1.5
CHD9-220ENST00000569794 HDCP19113 662 aa5.65□□□□□ -1.5
CHD9-220ENST00000569794 PDCP20941 246 aa5.65□□□□□ -1.5
CHD9-220ENST00000569794 MAP2K6P52564 334 aa5.65□□□□□ -1.5
CHD9-220ENST00000569794 E2F1Q01094 437 aa5.65□□□□□ -1.5
CHD9-220ENST00000569794 CCDC70Q6NSX1 233 aa5.65□□□□□ -1.5
CHD9-220ENST00000569794 CPXCR1Q8N123 301 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms