RNA–Protein interactions for RNA: ENST00000569455.1

CDH13-214, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-214ENST00000569455 CLDN5O00501 218 aa8.01□□□□□ -1.13
CDH13-214ENST00000569455 KRIT1O00522 736 aa8.01□□□□□ -1.13
CDH13-214ENST00000569455 DPYSL4O14531 572 aa8.01□□□□□ -1.13
CDH13-214ENST00000569455 PAPSS1O43252 624 aaPredicted RBP8.01□□□□□ -1.13
CDH13-214ENST00000569455 TLL1O43897 1013 aa8.01□□□□□ -1.13
CDH13-214ENST00000569455 HSF2BPO75031 334 aa8.01□□□□□ -1.13
CDH13-214ENST00000569455 ZRANB2O95218 330 aaKnown RBP eCLIP8.01□□□□□ -1.13
CDH13-214ENST00000569455 FGGP02679 453 aa8.01□□□□□ -1.13
CDH13-214ENST00000569455 GLI1P08151 1106 aa8.01□□□□□ -1.13
CDH13-214ENST00000569455 PDGFRAP16234 1089 aa8.01□□□□□ -1.13
CDH13-214ENST00000569455 FGFR3P22607 806 aa8.01□□□□□ -1.13
CDH13-214ENST00000569455 MCM3P25205 808 aa8.01□□□□□ -1.13
CDH13-214ENST00000569455 MARCKSL1P49006 195 aa8.01□□□□□ -1.13
CDH13-214ENST00000569455 TKTL1P51854 596 aa8.01□□□□□ -1.13
CDH13-214ENST00000569455 BCAR1P56945 870 aa8.01□□□□□ -1.13
CDH13-214ENST00000569455 MAP3K7CLP57077 242 aa8.01□□□□□ -1.13
CDH13-214ENST00000569455 RNASE9P60153 205 aaKnown RBP8.01□□□□□ -1.13
CDH13-214ENST00000569455 OGDHQ02218 1023 aa8.01□□□□□ -1.13
CDH13-214ENST00000569455 C2orf54Q08AI8 447 aa8.01□□□□□ -1.13
CDH13-214ENST00000569455 ADIGQ0VDE8 80 aa8.01□□□□□ -1.13
CDH13-214ENST00000569455 SMARCB1Q12824 385 aa8.01□□□□□ -1.13
CDH13-214ENST00000569455 ZNF211Q13398 564 aaPredicted RBP8.01□□□□□ -1.13
CDH13-214ENST00000569455 SMC1AQ14683 1233 aaKnown RBP8.01□□□□□ -1.13
CDH13-214ENST00000569455 ELF2Q15723 593 aa8.01□□□□□ -1.13
CDH13-214ENST00000569455 LONRF2Q1L5Z9 754 aa8.01□□□□□ -1.13
CDH13-214ENST00000569455 CTXN3Q4LDR2 81 aa8.01□□□□□ -1.13
CDH13-214ENST00000569455 GLE1Q53GS7 698 aaKnown RBP8.01□□□□□ -1.13
CDH13-214ENST00000569455 VARS2Q5ST30 1063 aaKnown RBP8.01□□□□□ -1.13
CDH13-214ENST00000569455 SPOUT1Q5T280 376 aaKnown RBP8.01□□□□□ -1.13
CDH13-214ENST00000569455 ZFYVE27Q5T4F4 411 aa8.01□□□□□ -1.13
CDH13-214ENST00000569455 DCAF12L1Q5VU92 463 aa8.01□□□□□ -1.13
CDH13-214ENST00000569455 PAQR9Q6ZVX9 377 aa8.01□□□□□ -1.13
CDH13-214ENST00000569455 ANKS3Q6ZW76 656 aa8.01□□□□□ -1.13
CDH13-214ENST00000569455 SLC26A9Q7LBE3 791 aa8.01□□□□□ -1.13
CDH13-214ENST00000569455 POLNQ7Z5Q5 900 aa8.01□□□□□ -1.13
CDH13-214ENST00000569455 CEP57Q86XR8 500 aa8.01□□□□□ -1.13
CDH13-214ENST00000569455 CCDC50Q8IVM0 306 aa8.01□□□□□ -1.13
CDH13-214ENST00000569455 SCUBE3Q8IX30 993 aa8.01□□□□□ -1.13
CDH13-214ENST00000569455 RCOR2Q8IZ40 523 aa8.01□□□□□ -1.13
CDH13-214ENST00000569455 EMC1Q8N766 993 aa8.01□□□□□ -1.13
CDH13-214ENST00000569455 OR10T2Q8NGX3 314 aa8.01□□□□□ -1.13
CDH13-214ENST00000569455 EXD1Q8NHP7 514 aa8.01□□□□□ -1.13
CDH13-214ENST00000569455 JOSD2Q8TAC2 188 aa8.01□□□□□ -1.13
CDH13-214ENST00000569455 RXFP2Q8WXD0 754 aa8.01□□□□□ -1.13
CDH13-214ENST00000569455 ZNF689Q96CS4 500 aaPredicted RBP8.01□□□□□ -1.13
CDH13-214ENST00000569455 FUBP3Q96I24 572 aaKnown RBP eCLIP8.01□□□□□ -1.13
CDH13-214ENST00000569455 RBM41Q96IZ5 413 aaKnown RBP8.01□□□□□ -1.13
CDH13-214ENST00000569455 YME1L1Q96TA2 773 aa8.01□□□□□ -1.13
CDH13-214ENST00000569455 PKMYT1Q99640 499 aa8.01□□□□□ -1.13
CDH13-214ENST00000569455 TRIM62Q9BVG3 475 aa8.01□□□□□ -1.13
CDH13-214ENST00000569455 ZCWPW1Q9H0M4 648 aa8.01□□□□□ -1.13
CDH13-214ENST00000569455 RC3H2Q9HBD1 1191 aaKnown RBP8.01□□□□□ -1.13
CDH13-214ENST00000569455 PNPLA8Q9NP80 782 aa8.01□□□□□ -1.13
CDH13-214ENST00000569455 CNGB3Q9NQW8 809 aa8.01□□□□□ -1.13
CDH13-214ENST00000569455 ARGLU1Q9NWB6 273 aaPredicted RBP8.01□□□□□ -1.13
CDH13-214ENST00000569455 MARCH5Q9NX47 278 aa8.01□□□□□ -1.13
CDH13-214ENST00000569455 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.01□□□□□ -1.13
CDH13-214ENST00000569455 TMEM59LQ9UK28 342 aa8.01□□□□□ -1.13
CDH13-214ENST00000569455 MTUS1Q9ULD2 1270 aa8.01□□□□□ -1.13
CDH13-214ENST00000569455 V9GYY5 206 aaPredicted RBP8.01□□□□□ -1.13
CDH13-214ENST00000569455 TARSL2A2RTX5 802 aaKnown RBP8□□□□□ -1.13
CDH13-214ENST00000569455 C2CD4BA6NLJ0 364 aa8□□□□□ -1.13
CDH13-214ENST00000569455 F8VP50 259 aa8□□□□□ -1.13
CDH13-214ENST00000569455 F8W810 466 aa8□□□□□ -1.13
CDH13-214ENST00000569455 DAB1O75553 588 aa8□□□□□ -1.13
CDH13-214ENST00000569455 KRT1P04264 644 aa8□□□□□ -1.13
CDH13-214ENST00000569455 RB1P06400 928 aa8□□□□□ -1.13
CDH13-214ENST00000569455 PYGMP11217 842 aa8□□□□□ -1.13
CDH13-214ENST00000569455 LAG3P18627 525 aa8□□□□□ -1.13
CDH13-214ENST00000569455 BDNFP23560 247 aa8□□□□□ -1.13
CDH13-214ENST00000569455 PCK1P35558 622 aa8□□□□□ -1.13
CDH13-214ENST00000569455 GJC1P36383 396 aa8□□□□□ -1.13
CDH13-214ENST00000569455 FLT3P36888 993 aa8□□□□□ -1.13
CDH13-214ENST00000569455 PTPN9P43378 593 aa8□□□□□ -1.13
CDH13-214ENST00000569455 TAS2R40P59535 323 aa8□□□□□ -1.13
CDH13-214ENST00000569455 COPS2P61201 443 aa8□□□□□ -1.13
CDH13-214ENST00000569455 YWHAZP63104 245 aaKnown RBP8□□□□□ -1.13
CDH13-214ENST00000569455 DEFB103AP81534 67 aa8□□□□□ -1.13
CDH13-214ENST00000569455 ZNF252P-AS1Q0IIN9 211 aa8□□□□□ -1.13
CDH13-214ENST00000569455 MRPL58Q14197 206 aaKnown RBP8□□□□□ -1.13
CDH13-214ENST00000569455 BTG3Q14201 252 aaPredicted RBP8□□□□□ -1.13
CDH13-214ENST00000569455 GRIN2CQ14957 1233 aa8□□□□□ -1.13
CDH13-214ENST00000569455 USP41Q3LFD5 358 aa8□□□□□ -1.13
CDH13-214ENST00000569455 SLC39A12Q504Y0 691 aa8□□□□□ -1.13
CDH13-214ENST00000569455 C8orf74Q6P047 294 aa8□□□□□ -1.13
CDH13-214ENST00000569455 VSTM1Q6UX27 236 aa8□□□□□ -1.13
CDH13-214ENST00000569455 CPNE8Q86YQ8 564 aa8□□□□□ -1.13
CDH13-214ENST00000569455 SLC13A5Q86YT5 568 aaPredicted RBP8□□□□□ -1.13
CDH13-214ENST00000569455 SCML4Q8N228 414 aa8□□□□□ -1.13
CDH13-214ENST00000569455 NOA1Q8NC60 698 aaKnown RBP8□□□□□ -1.13
CDH13-214ENST00000569455 C2orf15Q8WU43 125 aaKnown RBP8□□□□□ -1.13
CDH13-214ENST00000569455 IRGQQ8WZA9 623 aa8□□□□□ -1.13
CDH13-214ENST00000569455 RUBCNQ92622 972 aa8□□□□□ -1.13
CDH13-214ENST00000569455 CLP1Q92989 425 aaKnown RBP8□□□□□ -1.13
CDH13-214ENST00000569455 TIFAQ96CG3 184 aa8□□□□□ -1.13
CDH13-214ENST00000569455 ZNF558Q96NG5 402 aa8□□□□□ -1.13
CDH13-214ENST00000569455 SMOQ99835 787 aa8□□□□□ -1.13
CDH13-214ENST00000569455 TTPALQ9BTX7 342 aa8□□□□□ -1.13
CDH13-214ENST00000569455 PBX4Q9BYU1 374 aa8□□□□□ -1.13
CDH13-214ENST00000569455 GPR62Q9BZJ7 368 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms