RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 MRPL45Q9BRJ2 306 aaKnown RBP9.15□□□□□ -0.95
LINC00558-201ENST00000569422 KLHL14Q9P2G3 628 aa9.15□□□□□ -0.95
LINC00558-201ENST00000569422 DRG1Q9Y295 367 aaKnown RBP9.15□□□□□ -0.95
LINC00558-201ENST00000569422 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.15□□□□□ -0.95
LINC00558-201ENST00000569422 DNAJC25-GNG10A0A024R161 153 aa9.14□□□□□ -0.95
LINC00558-201ENST00000569422 KCNN4O15554 427 aa9.14□□□□□ -0.95
LINC00558-201ENST00000569422 RASSF9O75901 435 aa9.14□□□□□ -0.95
LINC00558-201ENST00000569422 TRUB2O95900 331 aaKnown RBP9.14□□□□□ -0.95
LINC00558-201ENST00000569422 P4HA1P13674 534 aa9.14□□□□□ -0.95
LINC00558-201ENST00000569422 TAC1P20366 129 aa9.14□□□□□ -0.95
LINC00558-201ENST00000569422 ADORA2BP29275 332 aa9.14□□□□□ -0.95
LINC00558-201ENST00000569422 GBP2P32456 591 aaPredicted RBP9.14□□□□□ -0.95
LINC00558-201ENST00000569422 OVGP1Q12889 678 aa9.14□□□□□ -0.95
LINC00558-201ENST00000569422 ITIH4Q14624 930 aa9.14□□□□□ -0.95
LINC00558-201ENST00000569422 SKIV2LQ15477 1246 aaKnown RBP9.14□□□□□ -0.95
LINC00558-201ENST00000569422 PMF1Q6P1K2 205 aa9.14□□□□□ -0.95
LINC00558-201ENST00000569422 LVRNQ6Q4G3 990 aa9.14□□□□□ -0.95
LINC00558-201ENST00000569422 PPIL6Q8IXY8 311 aa9.14□□□□□ -0.95
LINC00558-201ENST00000569422 NKD2Q969F2 451 aaPredicted RBP9.14□□□□□ -0.95
LINC00558-201ENST00000569422 AGAP3Q96P47 875 aa9.14□□□□□ -0.95
LINC00558-201ENST00000569422 BCO2Q9BYV7 579 aa9.14□□□□□ -0.95
LINC00558-201ENST00000569422 RAB6BQ9NRW1 208 aa9.14□□□□□ -0.95
LINC00558-201ENST00000569422 ASNSD1Q9NWL6 643 aa9.14□□□□□ -0.95
LINC00558-201ENST00000569422 GRID1Q9ULK0 1009 aa9.14□□□□□ -0.95
LINC00558-201ENST00000569422 SUFUQ9UMX1 484 aa9.14□□□□□ -0.95
LINC00558-201ENST00000569422 ALOX15BO15296 676 aa9.14□□□□□ -0.95
LINC00558-201ENST00000569422 TFE3P19532 575 aaPredicted RBP9.14□□□□□ -0.95
LINC00558-201ENST00000569422 GPD1P21695 349 aa9.14□□□□□ -0.95
LINC00558-201ENST00000569422 CDH5P33151 784 aaPredicted RBP9.14□□□□□ -0.95
LINC00558-201ENST00000569422 RDXP35241 583 aaKnown RBP9.14□□□□□ -0.95
LINC00558-201ENST00000569422 ABL2P42684 1182 aa9.14□□□□□ -0.95
LINC00558-201ENST00000569422 ROR1Q01973 937 aa9.14□□□□□ -0.95
LINC00558-201ENST00000569422 CGB2Q6NT52 195 aa9.14□□□□□ -0.95
LINC00558-201ENST00000569422 PPP1R21Q6ZMI0 780 aa9.14□□□□□ -0.95
LINC00558-201ENST00000569422 BBS12Q6ZW61 710 aa9.14□□□□□ -0.95
LINC00558-201ENST00000569422 IGDCC3Q8IVU1 814 aa9.14□□□□□ -0.95
LINC00558-201ENST00000569422 PDIK1LQ8N165 341 aa9.14□□□□□ -0.95
LINC00558-201ENST00000569422 CLEC4CQ8WTT0 213 aa9.14□□□□□ -0.95
LINC00558-201ENST00000569422 LENG1Q96BZ8 264 aaPredicted RBP9.14□□□□□ -0.95
LINC00558-201ENST00000569422 FAF2Q96CS3 445 aa9.14□□□□□ -0.95
LINC00558-201ENST00000569422 KLHL29Q96CT2 875 aa9.14□□□□□ -0.95
LINC00558-201ENST00000569422 OSMRQ99650 979 aa9.14□□□□□ -0.95
LINC00558-201ENST00000569422 TRIM56Q9BRZ2 755 aaKnown RBP9.14□□□□□ -0.95
LINC00558-201ENST00000569422 NT5C1AQ9BXI3 368 aa9.14□□□□□ -0.95
LINC00558-201ENST00000569422 TRIM6Q9C030 488 aaPredicted RBP9.14□□□□□ -0.95
LINC00558-201ENST00000569422 LHX5Q9H2C1 402 aa9.14□□□□□ -0.95
LINC00558-201ENST00000569422 CDHR5Q9HBB8 845 aa9.14□□□□□ -0.95
LINC00558-201ENST00000569422 CLUHO75153 1309 aa9.14□□□□□ -0.95
LINC00558-201ENST00000569422 ASB14A6NK59 587 aa9.14□□□□□ -0.95
LINC00558-201ENST00000569422 HMGCRP04035 888 aa9.14□□□□□ -0.95
LINC00558-201ENST00000569422 LCP1P13796 627 aa9.14□□□□□ -0.95
LINC00558-201ENST00000569422 ELK3P41970 407 aa9.14□□□□□ -0.95
LINC00558-201ENST00000569422 MSH2P43246 934 aa9.14□□□□□ -0.95
LINC00558-201ENST00000569422 RBP5P82980 135 aa9.14□□□□□ -0.95
LINC00558-201ENST00000569422 TNFAIP2Q03169 654 aa9.14□□□□□ -0.95
LINC00558-201ENST00000569422 LAMC2Q13753 1193 aa9.14□□□□□ -0.95
LINC00558-201ENST00000569422 DPYSL3Q14195 570 aa9.14□□□□□ -0.95
LINC00558-201ENST00000569422 ZNF268Q14587 947 aaPredicted RBP9.14□□□□□ -0.95
LINC00558-201ENST00000569422 SNCBQ16143 134 aa9.14□□□□□ -0.95
LINC00558-201ENST00000569422 CA9Q16790 459 aa9.14□□□□□ -0.95
LINC00558-201ENST00000569422 MTHFD1LQ6UB35 978 aa9.14□□□□□ -0.95
LINC00558-201ENST00000569422 FASTKD5Q7L8L6 764 aaKnown RBP9.14□□□□□ -0.95
LINC00558-201ENST00000569422 CATSPER4Q7RTX7 472 aa9.14□□□□□ -0.95
LINC00558-201ENST00000569422 GPRC5AQ8NFJ5 357 aa9.14□□□□□ -0.95
LINC00558-201ENST00000569422 LRRC8CQ8TDW0 803 aa9.14□□□□□ -0.95
LINC00558-201ENST00000569422 NDRG1Q92597 394 aaKnown RBP9.14□□□□□ -0.95
LINC00558-201ENST00000569422 MAGEB18Q96M61 343 aa9.14□□□□□ -0.95
LINC00558-201ENST00000569422 TTC25Q96NG3 672 aa9.14□□□□□ -0.95
LINC00558-201ENST00000569422 PAFAH2Q99487 392 aa9.14□□□□□ -0.95
LINC00558-201ENST00000569422 EIF2AQ9BY44 585 aaKnown RBP9.14□□□□□ -0.95
LINC00558-201ENST00000569422 MROH8Q9H579 483 aa9.14□□□□□ -0.95
LINC00558-201ENST00000569422 CCDC134Q9H6E4 229 aa9.14□□□□□ -0.95
LINC00558-201ENST00000569422 TUBGCP4Q9UGJ1 667 aa9.14□□□□□ -0.95
LINC00558-201ENST00000569422 LGALS13Q9UHV8 139 aa9.14□□□□□ -0.95
LINC00558-201ENST00000569422 DCTN4Q9UJW0 460 aa9.14□□□□□ -0.95
LINC00558-201ENST00000569422 BARX2Q9UMQ3 279 aaPredicted RBP9.14□□□□□ -0.95
LINC00558-201ENST00000569422 PHTF1Q9UMS5 762 aa9.14□□□□□ -0.95
LINC00558-201ENST00000569422 ARID2Q68CP9 1835 aa9.13□□□□□ -0.95
LINC00558-201ENST00000569422 BRCA2P51587 3418 aa9.13□□□□□ -0.95
LINC00558-201ENST00000569422 A8MUI8 341 aa9.13□□□□□ -0.95
LINC00558-201ENST00000569422 IGF2BP3O00425 579 aaKnown RBP eCLIP9.13□□□□□ -0.95
LINC00558-201ENST00000569422 TSPAN1O60635 241 aa9.13□□□□□ -0.95
LINC00558-201ENST00000569422 FAM155BO75949 473 aa9.13□□□□□ -0.95
LINC00558-201ENST00000569422 MCF2P10911 925 aa9.13□□□□□ -0.95
LINC00558-201ENST00000569422 ADRA1DP25100 572 aa9.13□□□□□ -0.95
LINC00558-201ENST00000569422 SLC26A2P50443 739 aa9.13□□□□□ -0.95
LINC00558-201ENST00000569422 GEMIN4P57678 1058 aaKnown RBP9.13□□□□□ -0.95
LINC00558-201ENST00000569422 MGAT5Q09328 741 aa9.13□□□□□ -0.95
LINC00558-201ENST00000569422 SPARCL1Q14515 664 aa9.13□□□□□ -0.95
LINC00558-201ENST00000569422 TSNAXIP1Q2TAA8 658 aa9.13□□□□□ -0.95
LINC00558-201ENST00000569422 LACTB2Q53H82 288 aaPredicted RBP9.13□□□□□ -0.95
LINC00558-201ENST00000569422 TAPT1Q6NXT6 567 aa9.13□□□□□ -0.95
LINC00558-201ENST00000569422 ZNF449Q6P9G9 518 aa9.13□□□□□ -0.95
LINC00558-201ENST00000569422 DRICH1Q6PGQ1 229 aaPredicted RBP9.13□□□□□ -0.95
LINC00558-201ENST00000569422 POLNQ7Z5Q5 900 aa9.13□□□□□ -0.95
LINC00558-201ENST00000569422 ANKRD13BQ86YJ7 626 aa9.13□□□□□ -0.95
LINC00558-201ENST00000569422 NIPA2Q8N8Q9 360 aa9.13□□□□□ -0.95
LINC00558-201ENST00000569422 FAM172AQ8WUF8 416 aa9.13□□□□□ -0.95
LINC00558-201ENST00000569422 ZMAT2Q96NC0 199 aaKnown RBP9.13□□□□□ -0.95
LINC00558-201ENST00000569422 WDR83Q9BRX9 315 aaKnown RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms