RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 KCNH2Q12809 1159 aa15.32■□□□□ 0.04
COMMD4-225ENST00000569245 ZNF268Q14587 947 aaPredicted RBP15.32■□□□□ 0.04
COMMD4-225ENST00000569245 CBWD6Q4V339 395 aa15.32■□□□□ 0.04
COMMD4-225ENST00000569245 ZNF394Q53GI3 561 aa15.32■□□□□ 0.04
COMMD4-225ENST00000569245 CBWD3Q5JTY5 395 aa15.32■□□□□ 0.04
COMMD4-225ENST00000569245 CBWD5Q5RIA9 395 aa15.32■□□□□ 0.04
COMMD4-225ENST00000569245 PAQR9Q6ZVX9 377 aa15.32■□□□□ 0.04
COMMD4-225ENST00000569245 ALYREFQ86V81 257 aaKnown RBP15.32■□□□□ 0.04
COMMD4-225ENST00000569245 C1orf210Q8IVY1 113 aa15.32■□□□□ 0.04
COMMD4-225ENST00000569245 FBXO32Q969P5 355 aa15.32■□□□□ 0.04
COMMD4-225ENST00000569245 HEXIM2Q96MH2 286 aaKnown RBP15.32■□□□□ 0.04
COMMD4-225ENST00000569245 TWNKQ96RR1 684 aa15.32■□□□□ 0.04
COMMD4-225ENST00000569245 PHOX2BQ99453 314 aa15.32■□□□□ 0.04
COMMD4-225ENST00000569245 C8orf33Q9H7E9 229 aaPredicted RBP15.32■□□□□ 0.04
COMMD4-225ENST00000569245 DLGAP2Q9P1A6 1054 aa15.32■□□□□ 0.04
COMMD4-225ENST00000569245 A0A1W2PQC6 194 aa15.31■□□□□ 0.04
COMMD4-225ENST00000569245 ZNF840PA6NDX5 716 aa15.31■□□□□ 0.04
COMMD4-225ENST00000569245 PMM2O15305 246 aa15.31■□□□□ 0.04
COMMD4-225ENST00000569245 FAM200BP0CF97 657 aa15.31■□□□□ 0.04
COMMD4-225ENST00000569245 MLLT6P55198 1093 aaPredicted RBP15.31■□□□□ 0.04
COMMD4-225ENST00000569245 MAP3K7CLP57077 242 aa15.31■□□□□ 0.04
COMMD4-225ENST00000569245 UBXN1Q04323 297 aa15.31■□□□□ 0.04
COMMD4-225ENST00000569245 ITPRIPL2Q3MIP1 535 aa15.31■□□□□ 0.04
COMMD4-225ENST00000569245 FKBP15Q5T1M5 1219 aa15.31■□□□□ 0.04
COMMD4-225ENST00000569245 C1orf228Q6PIY5 440 aa15.31■□□□□ 0.04
COMMD4-225ENST00000569245 VSTM4Q8IW00 320 aa15.31■□□□□ 0.04
COMMD4-225ENST00000569245 TTC39CQ8N584 583 aa15.31■□□□□ 0.04
COMMD4-225ENST00000569245 SCAMP5Q8TAC9 235 aa15.31■□□□□ 0.04
COMMD4-225ENST00000569245 TATDN2Q93075 761 aa15.31■□□□□ 0.04
COMMD4-225ENST00000569245 JAKMIP2Q96AA8 810 aa15.31■□□□□ 0.04
COMMD4-225ENST00000569245 CYFIP2Q96F07 1278 aa15.31■□□□□ 0.04
COMMD4-225ENST00000569245 MSANTD3Q96H12 275 aa15.31■□□□□ 0.04
COMMD4-225ENST00000569245 ERGIC2Q96RQ1 377 aa15.31■□□□□ 0.04
COMMD4-225ENST00000569245 EBF3Q9H4W6 596 aa15.31■□□□□ 0.04
COMMD4-225ENST00000569245 CHORDC1Q9UHD1 332 aaPredicted RBP15.31■□□□□ 0.04
COMMD4-225ENST00000569245 GTPBP10A4D1E9 387 aaKnown RBP15.3■□□□□ 0.04
COMMD4-225ENST00000569245 SPECC1L-ADORA2AF8WAN1 911 aa15.3■□□□□ 0.04
COMMD4-225ENST00000569245 CILPO75339 1184 aa15.3■□□□□ 0.04
COMMD4-225ENST00000569245 MAGEA9P43362 315 aa15.3■□□□□ 0.04
COMMD4-225ENST00000569245 SLC5A3P53794 718 aa15.3■□□□□ 0.04
COMMD4-225ENST00000569245 CCDC173Q0VFZ6 552 aa15.3■□□□□ 0.04
COMMD4-225ENST00000569245 CETN1Q12798 172 aa15.3■□□□□ 0.04
COMMD4-225ENST00000569245 LRMPQ12912 555 aa15.3■□□□□ 0.04
COMMD4-225ENST00000569245 MTF1Q14872 753 aa15.3■□□□□ 0.04
COMMD4-225ENST00000569245 TRIM68Q6AZZ1 485 aa15.3■□□□□ 0.04
COMMD4-225ENST00000569245 ITIH6Q6UXX5 1313 aa15.3■□□□□ 0.04
COMMD4-225ENST00000569245 RALGPS2Q86X27 583 aaPredicted RBP15.3■□□□□ 0.04
COMMD4-225ENST00000569245 PDZD8Q8NEN9 1154 aa15.3■□□□□ 0.04
COMMD4-225ENST00000569245 SH3RF2Q8TEC5 729 aa15.3■□□□□ 0.04
COMMD4-225ENST00000569245 FAXDC2Q96IV6 333 aa15.3■□□□□ 0.04
COMMD4-225ENST00000569245 PPP1R9BQ96SB3 815 aa15.3■□□□□ 0.04
COMMD4-225ENST00000569245 HNRNPABQ99729 332 aaKnown RBP15.3■□□□□ 0.04
COMMD4-225ENST00000569245 SMOQ99835 787 aa15.3■□□□□ 0.04
COMMD4-225ENST00000569245 ARID3AQ99856 593 aa15.3■□□□□ 0.04
COMMD4-225ENST00000569245 LMAN1LQ9HAT1 526 aa15.3■□□□□ 0.04
COMMD4-225ENST00000569245 CISHQ9NSE2 258 aa15.3■□□□□ 0.04
COMMD4-225ENST00000569245 DUS2Q9NX74 493 aaKnown RBP15.3■□□□□ 0.04
COMMD4-225ENST00000569245 GCNT4Q9P109 453 aa15.3■□□□□ 0.04
COMMD4-225ENST00000569245 COL4A3Q01955 1670 aa15.29■□□□□ 0.04
COMMD4-225ENST00000569245 SHISA7A6NL88 538 aa15.29■□□□□ 0.04
COMMD4-225ENST00000569245 PES1O00541 588 aaKnown RBP15.29■□□□□ 0.04
COMMD4-225ENST00000569245 P4HA2O15460 535 aa15.29■□□□□ 0.04
COMMD4-225ENST00000569245 LAMTOR5O43504 91 aa15.29■□□□□ 0.04
COMMD4-225ENST00000569245 BEST1O76090 585 aa15.29■□□□□ 0.04
COMMD4-225ENST00000569245 PFKLP17858 780 aa15.29■□□□□ 0.04
COMMD4-225ENST00000569245 CTHP32929 405 aa15.29■□□□□ 0.04
COMMD4-225ENST00000569245 RPS9P46781 194 aaKnown RBP15.29■□□□□ 0.04
COMMD4-225ENST00000569245 IFNAR2P48551 515 aa15.29■□□□□ 0.04
COMMD4-225ENST00000569245 FMO5P49326 533 aa15.29■□□□□ 0.04
COMMD4-225ENST00000569245 RUNX3Q13761 415 aa15.29■□□□□ 0.04
COMMD4-225ENST00000569245 PDGFRLQ15198 375 aa15.29■□□□□ 0.04
COMMD4-225ENST00000569245 WHAMMQ8TF30 809 aa15.29■□□□□ 0.04
COMMD4-225ENST00000569245 CLDN23Q96B33 292 aa15.29■□□□□ 0.04
COMMD4-225ENST00000569245 TMEM176AQ96HP8 235 aa15.29■□□□□ 0.04
COMMD4-225ENST00000569245 FAM83CQ9BQN1 747 aa15.29■□□□□ 0.04
COMMD4-225ENST00000569245 NACA2Q9H009 215 aa15.29■□□□□ 0.04
COMMD4-225ENST00000569245 FBXO44Q9H4M3 255 aa15.29■□□□□ 0.04
COMMD4-225ENST00000569245 COMMD8Q9NX08 183 aa15.29■□□□□ 0.04
COMMD4-225ENST00000569245 SMPD4Q9NXE4 827 aa15.29■□□□□ 0.04
COMMD4-225ENST00000569245 ARHGAP26Q9UNA1 814 aa15.29■□□□□ 0.04
COMMD4-225ENST00000569245 COQ4Q9Y3A0 265 aa15.29■□□□□ 0.04
COMMD4-225ENST00000569245 TNFRSF10BO14763 440 aa15.28■□□□□ 0.04
COMMD4-225ENST00000569245 MBL2P11226 248 aaPredicted RBP15.28■□□□□ 0.04
COMMD4-225ENST00000569245 ARSAP15289 507 aa15.28■□□□□ 0.04
COMMD4-225ENST00000569245 YWHAEP62258 255 aaKnown RBP15.28■□□□□ 0.04
COMMD4-225ENST00000569245 AMPD2Q01433 879 aa15.28■□□□□ 0.04
COMMD4-225ENST00000569245 CUL2Q13617 745 aa15.28■□□□□ 0.04
COMMD4-225ENST00000569245 LRRC32Q14392 662 aa15.28■□□□□ 0.04
COMMD4-225ENST00000569245 PON2Q15165 354 aa15.28■□□□□ 0.04
COMMD4-225ENST00000569245 ZNF77Q15935 545 aa15.28■□□□□ 0.04
COMMD4-225ENST00000569245 HECTD3Q5T447 861 aa15.28■□□□□ 0.04
COMMD4-225ENST00000569245 SPECC1LQ69YQ0 1117 aa15.28■□□□□ 0.04
COMMD4-225ENST00000569245 TXNDC11Q6PKC3 985 aa15.28■□□□□ 0.04
COMMD4-225ENST00000569245 ZMIZ2Q8NF64 920 aa15.28■□□□□ 0.04
COMMD4-225ENST00000569245 RIN3Q8TB24 985 aa15.28■□□□□ 0.04
COMMD4-225ENST00000569245 OSCP1Q8WVF1 389 aa15.28■□□□□ 0.04
COMMD4-225ENST00000569245 OVCA2Q8WZ82 227 aa15.28■□□□□ 0.04
COMMD4-225ENST00000569245 RNF38Q9H0F5 515 aa15.28■□□□□ 0.04
COMMD4-225ENST00000569245 CSNK1G1Q9HCP0 422 aa15.28■□□□□ 0.04
COMMD4-225ENST00000569245 GMIPQ9P107 970 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms