RNA–Protein interactions for RNA: ENST00000569189.2

GGA2-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 5

Gene GGA2, Length 586 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-215ENST00000569189 DUSP16Q9BY84 665 aa25.72■■□□□ 1.71
GGA2-215ENST00000569189 NUP62CLQ9H1M0 184 aa25.72■■□□□ 1.71
GGA2-215ENST00000569189 LMBRD1Q9NUN5 540 aa25.72■■□□□ 1.71
GGA2-215ENST00000569189 CHORDC1Q9UHD1 332 aaPredicted RBP25.72■■□□□ 1.71
GGA2-215ENST00000569189 HHLA1C9JL84 531 aa25.71■■□□□ 1.71
GGA2-215ENST00000569189 LEFTY2O00292 366 aa25.71■■□□□ 1.71
GGA2-215ENST00000569189 ZDHHC11BP0C7U3 371 aa25.71■■□□□ 1.71
GGA2-215ENST00000569189 IFNAR2P48551 515 aa25.71■■□□□ 1.71
GGA2-215ENST00000569189 ZXDBP98169 803 aa25.71■■□□□ 1.71
GGA2-215ENST00000569189 KCNH2Q12809 1159 aa25.71■■□□□ 1.71
GGA2-215ENST00000569189 GBP4Q96PP9 640 aa25.71■■□□□ 1.71
GGA2-215ENST00000569189 CHRDQ9H2X0 955 aa25.71■■□□□ 1.71
GGA2-215ENST00000569189 LMAN1LQ9HAT1 526 aa25.71■■□□□ 1.71
GGA2-215ENST00000569189 UTP18Q9Y5J1 556 aaKnown RBP eCLIP25.71■■□□□ 1.71
GGA2-215ENST00000569189 CPQQ9Y646 472 aa25.71■■□□□ 1.71
GGA2-215ENST00000569189 WNT6Q9Y6F9 365 aa25.71■■□□□ 1.71
GGA2-215ENST00000569189 DMDP11532 3685 aa25.7■■□□□ 1.7
GGA2-215ENST00000569189 OTOL1A6NHN0 477 aaPredicted RBP25.7■■□□□ 1.7
GGA2-215ENST00000569189 LAMTOR5O43504 91 aa25.7■■□□□ 1.7
GGA2-215ENST00000569189 AFPP02771 609 aaKnown RBP25.7■■□□□ 1.7
GGA2-215ENST00000569189 MBL2P11226 248 aaPredicted RBP25.7■■□□□ 1.7
GGA2-215ENST00000569189 CHRNB1P11230 501 aa25.7■■□□□ 1.7
GGA2-215ENST00000569189 NBL1P41271 181 aa25.7■■□□□ 1.7
GGA2-215ENST00000569189 MRE11P49959 708 aa25.7■■□□□ 1.7
GGA2-215ENST00000569189 TUBP50607 506 aa25.7■■□□□ 1.7
GGA2-215ENST00000569189 PON2Q15165 354 aa25.7■■□□□ 1.7
GGA2-215ENST00000569189 HECTD3Q5T447 861 aa25.7■■□□□ 1.7
GGA2-215ENST00000569189 ALYREFQ86V81 257 aaKnown RBP25.7■■□□□ 1.7
GGA2-215ENST00000569189 CPA6Q8N4T0 437 aa25.7■■□□□ 1.7
GGA2-215ENST00000569189 UBR7Q8N806 425 aa25.7■■□□□ 1.7
GGA2-215ENST00000569189 ATP2A3Q93084 1043 aa25.7■■□□□ 1.7
GGA2-215ENST00000569189 IER2Q9BTL4 223 aa25.7■■□□□ 1.7
GGA2-215ENST00000569189 SMPD4Q9NXE4 827 aa25.7■■□□□ 1.7
GGA2-215ENST00000569189 COCHO43405 550 aa25.69■■□□□ 1.7
GGA2-215ENST00000569189 ACO1P21399 889 aaKnown RBP25.69■■□□□ 1.7
GGA2-215ENST00000569189 LRRC32Q14392 662 aa25.69■■□□□ 1.7
GGA2-215ENST00000569189 EML3Q32P44 896 aa25.69■■□□□ 1.7
GGA2-215ENST00000569189 ARHGAP17Q68EM7 881 aa25.69■■□□□ 1.7
GGA2-215ENST00000569189 DDX42Q86XP3 938 aaKnown RBP eCLIP25.69■■□□□ 1.7
GGA2-215ENST00000569189 MAML2Q8IZL2 1156 aaPredicted RBP25.69■■□□□ 1.7
GGA2-215ENST00000569189 LMO3Q8TAP4 145 aa25.69■■□□□ 1.7
GGA2-215ENST00000569189 CNOT6LQ96LI5 555 aaKnown RBP25.69■■□□□ 1.7
GGA2-215ENST00000569189 IPO9Q96P70 1041 aaKnown RBP25.69■■□□□ 1.7
GGA2-215ENST00000569189 MED15Q96RN5 788 aa25.69■■□□□ 1.7
GGA2-215ENST00000569189 CCSER2Q9H7U1 834 aa25.69■■□□□ 1.7
GGA2-215ENST00000569189 TLR8Q9NR97 1041 aaKnown RBP25.69■■□□□ 1.7
GGA2-215ENST00000569189 SCML2Q9UQR0 700 aa25.69■■□□□ 1.7
GGA2-215ENST00000569189 USP34Q70CQ2 3546 aa25.69■■□□□ 1.7
GGA2-215ENST00000569189 SP9P0CG40 484 aa25.68■■□□□ 1.7
GGA2-215ENST00000569189 MTAPQ13126 283 aa25.68■■□□□ 1.7
GGA2-215ENST00000569189 PPM1KQ8N3J5 372 aa25.68■■□□□ 1.7
GGA2-215ENST00000569189 KIAA1958Q8N8K9 716 aa25.68■■□□□ 1.7
GGA2-215ENST00000569189 ECT2Q9H8V3 914 aa25.68■■□□□ 1.7
GGA2-215ENST00000569189 PROB1E7EW31 1015 aa25.67■■□□□ 1.7
GGA2-215ENST00000569189 CYP26A1O43174 497 aa25.67■■□□□ 1.7
GGA2-215ENST00000569189 PGFP49763 221 aa25.67■■□□□ 1.7
GGA2-215ENST00000569189 KIF11P52732 1056 aa25.67■■□□□ 1.7
GGA2-215ENST00000569189 AMPD2Q01433 879 aa25.67■■□□□ 1.7
GGA2-215ENST00000569189 DGKKQ5KSL6 1271 aa25.67■■□□□ 1.7
GGA2-215ENST00000569189 CHFRQ96EP1 664 aa25.67■■□□□ 1.7
GGA2-215ENST00000569189 CFAP97Q9P2B7 532 aa25.67■■□□□ 1.7
GGA2-215ENST00000569189 FBXO4Q9UKT5 387 aa25.67■■□□□ 1.7
GGA2-215ENST00000569189 ZFHX2Q9C0A1 2572 aaPredicted RBP25.67■■□□□ 1.7
GGA2-215ENST00000569189 ATG2BQ96BY7 2078 aa25.67■■□□□ 1.7
GGA2-215ENST00000569189 MYOFQ9NZM1 2061 aa25.67■■□□□ 1.7
GGA2-215ENST00000569189 TLR5O60602 858 aa25.66■■□□□ 1.7
GGA2-215ENST00000569189 CD19P15391 556 aa25.66■■□□□ 1.7
GGA2-215ENST00000569189 DPCR1Q3MIW9 517 aa25.66■■□□□ 1.7
GGA2-215ENST00000569189 SGO2Q562F6 1265 aa25.66■■□□□ 1.7
GGA2-215ENST00000569189 ANKRD52Q8NB46 1076 aa25.66■■□□□ 1.7
GGA2-215ENST00000569189 EHBP1Q8NDI1 1231 aa25.66■■□□□ 1.7
GGA2-215ENST00000569189 ZFRQ96KR1 1074 aaKnown RBP25.66■■□□□ 1.7
GGA2-215ENST00000569189 NACA2Q9H009 215 aa25.66■■□□□ 1.7
GGA2-215ENST00000569189 LINC00597Q9H2U6 94 aa25.66■■□□□ 1.7
GGA2-215ENST00000569189 RBM12Q9NTZ6 932 aaKnown RBP25.66■■□□□ 1.7
GGA2-215ENST00000569189 NFATC1O95644 943 aa25.65■■□□□ 1.7
GGA2-215ENST00000569189 GJA4P35212 333 aa25.65■■□□□ 1.7
GGA2-215ENST00000569189 SLC8A3P57103 927 aa25.65■■□□□ 1.7
GGA2-215ENST00000569189 CCINQ13939 588 aa25.65■■□□□ 1.7
GGA2-215ENST00000569189 GOLGA7BQ2TAP0 167 aa25.65■■□□□ 1.7
GGA2-215ENST00000569189 TMEM270Q6UE05 265 aa25.65■■□□□ 1.7
GGA2-215ENST00000569189 TTC30AQ86WT1 665 aa25.65■■□□□ 1.7
GGA2-215ENST00000569189 CREBRFQ8IUR6 639 aa25.65■■□□□ 1.7
GGA2-215ENST00000569189 ARHGEF19Q8IW93 802 aa25.65■■□□□ 1.7
GGA2-215ENST00000569189 KAT5Q92993 513 aa25.65■■□□□ 1.7
GGA2-215ENST00000569189 UBXN6Q9BZV1 441 aa25.65■■□□□ 1.7
GGA2-215ENST00000569189 INTS2Q9H0H0 1204 aaKnown RBP25.65■■□□□ 1.7
GGA2-215ENST00000569189 PRMT8Q9NR22 394 aaPredicted RBP25.65■■□□□ 1.7
GGA2-215ENST00000569189 DACH1Q9UI36 760 aa25.65■■□□□ 1.7
GGA2-215ENST00000569189 TSPAN16Q9UKR8 245 aa25.65■■□□□ 1.7
GGA2-215ENST00000569189 TRDMT1O14717 391 aaKnown RBP25.64■■□□□ 1.7
GGA2-215ENST00000569189 SLC9A3R1O14745 358 aaPredicted RBP25.64■■□□□ 1.7
GGA2-215ENST00000569189 VDRP11473 427 aa25.64■■□□□ 1.7
GGA2-215ENST00000569189 GCNT1Q02742 428 aa25.64■■□□□ 1.7
GGA2-215ENST00000569189 CSTF1Q05048 431 aaKnown RBP25.64■■□□□ 1.7
GGA2-215ENST00000569189 NR1H3Q13133 447 aa25.64■■□□□ 1.7
GGA2-215ENST00000569189 TPD52L1Q16890 204 aaPredicted RBP25.64■■□□□ 1.7
GGA2-215ENST00000569189 ZNF528Q3MIS6 628 aa25.64■■□□□ 1.7
GGA2-215ENST00000569189 TMEM196Q5HYL7 178 aa25.64■■□□□ 1.7
GGA2-215ENST00000569189 MAMSTRQ6ZN01 415 aa25.64■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms