RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 NCAM1P13591 858 aa9.26□□□□□ -0.93
SMG1-216ENST00000569122 JUPP14923 745 aa9.26□□□□□ -0.93
SMG1-216ENST00000569122 NDUFV2P19404 249 aa9.26□□□□□ -0.93
SMG1-216ENST00000569122 STARD3Q14849 445 aa9.26□□□□□ -0.93
SMG1-216ENST00000569122 TEAD4Q15561 434 aa9.26□□□□□ -0.93
SMG1-216ENST00000569122 HLA-BQ31612 363 aa9.26□□□□□ -0.93
SMG1-216ENST00000569122 LY6G5CQ5SRR4 150 aa9.26□□□□□ -0.93
SMG1-216ENST00000569122 TDRD10Q5VZ19 366 aaKnown RBP9.26□□□□□ -0.93
SMG1-216ENST00000569122 ADALQ6DHV7 355 aa9.26□□□□□ -0.93
SMG1-216ENST00000569122 DTHD1Q6ZMT9 781 aa9.26□□□□□ -0.93
SMG1-216ENST00000569122 DPH6Q7L8W6 267 aa9.26□□□□□ -0.93
SMG1-216ENST00000569122 ETFBKMTQ8IXQ9 262 aa9.26□□□□□ -0.93
SMG1-216ENST00000569122 TOP6BLQ8N6T0 577 aa9.26□□□□□ -0.93
SMG1-216ENST00000569122 LRRC52Q8N7C0 313 aa9.26□□□□□ -0.93
SMG1-216ENST00000569122 PDZD8Q8NEN9 1154 aa9.26□□□□□ -0.93
SMG1-216ENST00000569122 CDK5RAP3Q96JB5 506 aa9.26□□□□□ -0.93
SMG1-216ENST00000569122 MIR1-1HGQ9H1L0 117 aa9.26□□□□□ -0.93
SMG1-216ENST00000569122 PCED1AQ9H1Q7 454 aa9.26□□□□□ -0.93
SMG1-216ENST00000569122 TOR4AQ9NXH8 423 aa9.26□□□□□ -0.93
SMG1-216ENST00000569122 GDAP2Q9NXN4 497 aa9.26□□□□□ -0.93
SMG1-216ENST00000569122 CFAP97Q9P2B7 532 aa9.26□□□□□ -0.93
SMG1-216ENST00000569122 SH3BP1Q9Y3L3 701 aa9.26□□□□□ -0.93
SMG1-216ENST00000569122 PCDHGA1Q9Y5H4 931 aa9.26□□□□□ -0.93
SMG1-216ENST00000569122 AK5Q9Y6K8 562 aa9.26□□□□□ -0.93
SMG1-216ENST00000569122 ANTXRLA6NF34 631 aa9.25□□□□□ -0.93
SMG1-216ENST00000569122 GOLGA8CPA6NN73 597 aa9.25□□□□□ -0.93
SMG1-216ENST00000569122 ARHGAP6O43182 974 aa9.25□□□□□ -0.93
SMG1-216ENST00000569122 MBL2P11226 248 aaPredicted RBP9.25□□□□□ -0.93
SMG1-216ENST00000569122 MAOBP27338 520 aa9.25□□□□□ -0.93
SMG1-216ENST00000569122 PRPHP41219 470 aa9.25□□□□□ -0.93
SMG1-216ENST00000569122 ACOT2P49753 483 aa9.25□□□□□ -0.93
SMG1-216ENST00000569122 AFF3P51826 1226 aaKnown RBP9.25□□□□□ -0.93
SMG1-216ENST00000569122 NOP14P78316 857 aaKnown RBP9.25□□□□□ -0.93
SMG1-216ENST00000569122 ZXDBP98169 803 aa9.25□□□□□ -0.93
SMG1-216ENST00000569122 RAD51AP2Q09MP3 1159 aa9.25□□□□□ -0.93
SMG1-216ENST00000569122 ANO4Q32M45 955 aa9.25□□□□□ -0.93
SMG1-216ENST00000569122 TAF1BQ53T94 588 aaPredicted RBP9.25□□□□□ -0.93
SMG1-216ENST00000569122 GRAMD4Q6IC98 578 aa9.25□□□□□ -0.93
SMG1-216ENST00000569122 FAM171BQ6P995 826 aa9.25□□□□□ -0.93
SMG1-216ENST00000569122 KIAA1324Q6UXG2 1013 aaKnown RBP9.25□□□□□ -0.93
SMG1-216ENST00000569122 C12orf40Q86WS4 652 aa9.25□□□□□ -0.93
SMG1-216ENST00000569122 SFTPA1Q8IWL2 248 aa9.25□□□□□ -0.93
SMG1-216ENST00000569122 PHTF2Q8N3S3 785 aa9.25□□□□□ -0.93
SMG1-216ENST00000569122 MYCT1Q8N699 235 aa9.25□□□□□ -0.93
SMG1-216ENST00000569122 C4orf32Q8N8J7 132 aa9.25□□□□□ -0.93
SMG1-216ENST00000569122 NSUN7Q8NE18 718 aaKnown RBP9.25□□□□□ -0.93
SMG1-216ENST00000569122 GTF3C6Q969F1 213 aa9.25□□□□□ -0.93
SMG1-216ENST00000569122 TOE1Q96GM8 510 aaKnown RBP9.25□□□□□ -0.93
SMG1-216ENST00000569122 CRELD1Q96HD1 420 aa9.25□□□□□ -0.93
SMG1-216ENST00000569122 C8orf76Q96K31 380 aa9.25□□□□□ -0.93
SMG1-216ENST00000569122 MRGPRX1Q96LB2 322 aa9.25□□□□□ -0.93
SMG1-216ENST00000569122 GABRG3Q99928 467 aa9.25□□□□□ -0.93
SMG1-216ENST00000569122 NUP58Q9BVL2 599 aa9.25□□□□□ -0.93
SMG1-216ENST00000569122 TTLL2Q9BWV7 592 aa9.25□□□□□ -0.93
SMG1-216ENST00000569122 NRSN2Q9GZP1 204 aa9.25□□□□□ -0.93
SMG1-216ENST00000569122 RNF38Q9H0F5 515 aa9.25□□□□□ -0.93
SMG1-216ENST00000569122 PARVGQ9HBI0 331 aa9.25□□□□□ -0.93
SMG1-216ENST00000569122 ITM2CQ9NQX7 267 aa9.25□□□□□ -0.93
SMG1-216ENST00000569122 SPHK2Q9NRA0 654 aa9.25□□□□□ -0.93
SMG1-216ENST00000569122 SMPD4Q9NXE4 827 aa9.25□□□□□ -0.93
SMG1-216ENST00000569122 WSB2Q9NYS7 404 aaPredicted RBP9.25□□□□□ -0.93
SMG1-216ENST00000569122 WDR35Q9P2L0 1181 aa9.25□□□□□ -0.93
SMG1-216ENST00000569122 AGO2Q9UKV8 859 aaKnown RBP9.25□□□□□ -0.93
SMG1-216ENST00000569122 CDH9Q9ULB4 789 aa9.25□□□□□ -0.93
SMG1-216ENST00000569122 L1RE1Q9UN81 338 aa9.25□□□□□ -0.93
SMG1-216ENST00000569122 ATG2BQ96BY7 2078 aa9.25□□□□□ -0.93
SMG1-216ENST00000569122 NAV2Q8IVL1 2488 aa9.25□□□□□ -0.93
SMG1-216ENST00000569122 METTL12A8MUP2 240 aa9.24□□□□□ -0.93
SMG1-216ENST00000569122 K7ENM7 598 aa9.24□□□□□ -0.93
SMG1-216ENST00000569122 GABRDO14764 452 aa9.24□□□□□ -0.93
SMG1-216ENST00000569122 SLC26A4O43511 780 aa9.24□□□□□ -0.93
SMG1-216ENST00000569122 TRAK2O60296 914 aa9.24□□□□□ -0.93
SMG1-216ENST00000569122 PCDHGA12O60330 932 aa9.24□□□□□ -0.93
SMG1-216ENST00000569122 FAM13AO94988 1023 aa9.24□□□□□ -0.93
SMG1-216ENST00000569122 OAS1P00973 400 aaKnown RBP9.24□□□□□ -0.93
SMG1-216ENST00000569122 PLA2G4BP0C869 781 aa9.24□□□□□ -0.93
SMG1-216ENST00000569122 ACAT1P24752 427 aaKnown RBP9.24□□□□□ -0.93
SMG1-216ENST00000569122 ITPKBP27987 946 aa9.24□□□□□ -0.93
SMG1-216ENST00000569122 RBP5P82980 135 aa9.24□□□□□ -0.93
SMG1-216ENST00000569122 RHDQ02161 417 aa9.24□□□□□ -0.93
SMG1-216ENST00000569122 MESP2Q0VG99 397 aa9.24□□□□□ -0.93
SMG1-216ENST00000569122 MYO1EQ12965 1108 aa9.24□□□□□ -0.93
SMG1-216ENST00000569122 SF3A1Q15459 793 aaKnown RBP9.24□□□□□ -0.93
SMG1-216ENST00000569122 ZRSR1Q15695 479 aaKnown RBP9.24□□□□□ -0.93
SMG1-216ENST00000569122 PTPRNQ16849 979 aa9.24□□□□□ -0.93
SMG1-216ENST00000569122 HYIQ5T013 277 aa9.24□□□□□ -0.93
SMG1-216ENST00000569122 ADGRF2Q8IZF7 708 aa9.24□□□□□ -0.93
SMG1-216ENST00000569122 ZCCHC9Q8N567 271 aaKnown RBP9.24□□□□□ -0.93
SMG1-216ENST00000569122 NAT16Q8N8M0 369 aa9.24□□□□□ -0.93
SMG1-216ENST00000569122 SNIP1Q8TAD8 396 aaKnown RBP9.24□□□□□ -0.93
SMG1-216ENST00000569122 OVCA2Q8WZ82 227 aa9.24□□□□□ -0.93
SMG1-216ENST00000569122 FGF11Q92914 225 aa9.24□□□□□ -0.93
SMG1-216ENST00000569122 C8orf48Q96LL4 319 aa9.24□□□□□ -0.93
SMG1-216ENST00000569122 PKMYT1Q99640 499 aa9.24□□□□□ -0.93
SMG1-216ENST00000569122 ZDHHC4Q9NPG8 344 aa9.24□□□□□ -0.93
SMG1-216ENST00000569122 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.24□□□□□ -0.936e-9■■■■■ 134.6
SMG1-216ENST00000569122 DNAJC17Q9NVM6 304 aaKnown RBP9.24□□□□□ -0.93
SMG1-216ENST00000569122 ITGA11Q9UKX5 1188 aa9.24□□□□□ -0.93
SMG1-216ENST00000569122 AGAP1Q9UPQ3 857 aa9.24□□□□□ -0.93
SMG1-216ENST00000569122 FNDC3AQ9Y2H6 1198 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms