RNA–Protein interactions for RNA: ENST00000568922.1

GGA2-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 2

Gene GGA2, Length 1,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-213ENST00000568922 CCDC14Q49A88 953 aa13.21□□□□□ -0.29
GGA2-213ENST00000568922 TMEM240Q5SV17 173 aa13.21□□□□□ -0.29
GGA2-213ENST00000568922 TAS1R1Q7RTX1 841 aa13.21□□□□□ -0.29
GGA2-213ENST00000568922 RCOR2Q8IZ40 523 aa13.21□□□□□ -0.29
GGA2-213ENST00000568922 GPR161Q8N6U8 529 aaKnown RBP13.21□□□□□ -0.29
GGA2-213ENST00000568922 NOA1Q8NC60 698 aaKnown RBP13.21□□□□□ -0.29
GGA2-213ENST00000568922 SPPL2BQ8TCT7 592 aa13.21□□□□□ -0.29
GGA2-213ENST00000568922 C2orf15Q8WU43 125 aaKnown RBP13.21□□□□□ -0.29
GGA2-213ENST00000568922 PIK3R5Q8WYR1 880 aa13.21□□□□□ -0.29
GGA2-213ENST00000568922 IRGQQ8WZA9 623 aa13.21□□□□□ -0.29
GGA2-213ENST00000568922 RBM41Q96IZ5 413 aaKnown RBP13.21□□□□□ -0.29
GGA2-213ENST00000568922 DDX23Q9BUQ8 820 aaKnown RBP13.21□□□□□ -0.29
GGA2-213ENST00000568922 AAASQ9NRG9 546 aa13.21□□□□□ -0.29
GGA2-213ENST00000568922 CHST7Q9NS84 486 aa13.21□□□□□ -0.29
GGA2-213ENST00000568922 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.21□□□□□ -0.29
GGA2-213ENST00000568922 SPG21Q9NZD8 308 aa13.21□□□□□ -0.29
GGA2-213ENST00000568922 MTRRQ9UBK8 725 aa13.21□□□□□ -0.29
GGA2-213ENST00000568922 BACE2Q9Y5Z0 518 aa13.21□□□□□ -0.29
GGA2-213ENST00000568922 KRIT1O00522 736 aa13.2□□□□□ -0.3
GGA2-213ENST00000568922 TRIM66O15016 1216 aa13.2□□□□□ -0.3
GGA2-213ENST00000568922 ZBED1O96006 694 aa13.2□□□□□ -0.3
GGA2-213ENST00000568922 SOD2P04179 222 aa13.2□□□□□ -0.3
GGA2-213ENST00000568922 CPB1P15086 417 aa13.2□□□□□ -0.3
GGA2-213ENST00000568922 CYP2F1P24903 491 aa13.2□□□□□ -0.3
GGA2-213ENST00000568922 PPM1AP35813 382 aa13.2□□□□□ -0.3
GGA2-213ENST00000568922 GJC1P36383 396 aa13.2□□□□□ -0.3
GGA2-213ENST00000568922 MATKP42679 507 aa13.2□□□□□ -0.3
GGA2-213ENST00000568922 NAA30Q147X3 362 aaPredicted RBP13.2□□□□□ -0.3
GGA2-213ENST00000568922 ELF2Q15723 593 aa13.2□□□□□ -0.3
GGA2-213ENST00000568922 ODF2Q5BJF6 829 aa13.2□□□□□ -0.3
GGA2-213ENST00000568922 PM20D1Q6GTS8 502 aa13.2□□□□□ -0.3
GGA2-213ENST00000568922 KIAA1841Q6NSI8 718 aa13.2□□□□□ -0.3
GGA2-213ENST00000568922 CCDC70Q6NSX1 233 aa13.2□□□□□ -0.3
GGA2-213ENST00000568922 GPRIN1Q7Z2K8 1008 aa13.2□□□□□ -0.3
GGA2-213ENST00000568922 SLC13A5Q86YT5 568 aaPredicted RBP13.2□□□□□ -0.3
GGA2-213ENST00000568922 ARFGAP1Q8N6T3 406 aa13.2□□□□□ -0.3
GGA2-213ENST00000568922 FAM149B1Q96BN6 582 aa13.2□□□□□ -0.3
GGA2-213ENST00000568922 C8orf48Q96LL4 319 aa13.2□□□□□ -0.3
GGA2-213ENST00000568922 CFAP57Q96MR6 1250 aa13.2□□□□□ -0.3
GGA2-213ENST00000568922 HERC2P3Q9BVR0 1158 aa13.2□□□□□ -0.3
GGA2-213ENST00000568922 RBM12Q9NTZ6 932 aaKnown RBP13.2□□□□□ -0.3
GGA2-213ENST00000568922 STK39Q9UEW8 545 aa13.2□□□□□ -0.3
GGA2-213ENST00000568922 USP18Q9UMW8 372 aa13.2□□□□□ -0.3
GGA2-213ENST00000568922 USP3Q9Y6I4 520 aa13.2□□□□□ -0.3
GGA2-213ENST00000568922 GOLGA6L10A0A0M3HER8 536 aa13.2□□□□□ -0.3
GGA2-213ENST00000568922 TCF4P15884 667 aa13.2□□□□□ -0.3
GGA2-213ENST00000568922 MIPP30301 263 aa13.2□□□□□ -0.3
GGA2-213ENST00000568922 NOS2P35228 1153 aa13.2□□□□□ -0.3
GGA2-213ENST00000568922 RABGGTBP53611 331 aa13.2□□□□□ -0.3
GGA2-213ENST00000568922 EPHB4P54760 987 aa13.2□□□□□ -0.3
GGA2-213ENST00000568922 ARPP19P56211 112 aa13.2□□□□□ -0.3
GGA2-213ENST00000568922 COPS2P61201 443 aa13.2□□□□□ -0.3
GGA2-213ENST00000568922 ATP11AP98196 1134 aa13.2□□□□□ -0.3
GGA2-213ENST00000568922 SMC1AQ14683 1233 aaKnown RBP13.2□□□□□ -0.3
GGA2-213ENST00000568922 PSMD5Q16401 504 aa13.2□□□□□ -0.3
GGA2-213ENST00000568922 PPP2R5EQ16537 467 aa13.2□□□□□ -0.3
GGA2-213ENST00000568922 CDO1Q16878 200 aa13.2□□□□□ -0.3
GGA2-213ENST00000568922 C15orf59Q2T9L4 293 aaPredicted RBP13.2□□□□□ -0.3
GGA2-213ENST00000568922 ZFYVE27Q5T4F4 411 aa13.2□□□□□ -0.3
GGA2-213ENST00000568922 AADACL2Q6P093 401 aa13.2□□□□□ -0.3
GGA2-213ENST00000568922 PRSS55Q6UWB4 352 aaPredicted RBP13.2□□□□□ -0.3
GGA2-213ENST00000568922 CCDC50Q8IVM0 306 aa13.2□□□□□ -0.3
GGA2-213ENST00000568922 DEFB106AQ8N104 65 aa13.2□□□□□ -0.3
GGA2-213ENST00000568922 FIBCD1Q8N539 461 aa13.2□□□□□ -0.3
GGA2-213ENST00000568922 FAM172AQ8WUF8 416 aa13.2□□□□□ -0.3
GGA2-213ENST00000568922 MAIP1Q8WWC4 291 aa13.2□□□□□ -0.3
GGA2-213ENST00000568922 RIN2Q8WYP3 895 aaPredicted RBP13.2□□□□□ -0.3
GGA2-213ENST00000568922 HERVK_113Q902F9 699 aa13.2□□□□□ -0.3
GGA2-213ENST00000568922 CENPIQ92674 756 aaPredicted RBP13.2□□□□□ -0.3
GGA2-213ENST00000568922 SLC2A13Q96QE2 648 aa13.2□□□□□ -0.3
GGA2-213ENST00000568922 SLC9A7Q96T83 725 aa13.2□□□□□ -0.3
GGA2-213ENST00000568922 C11orf84Q9BUA3 381 aaPredicted RBP13.2□□□□□ -0.3
GGA2-213ENST00000568922 TRIM62Q9BVG3 475 aa13.2□□□□□ -0.3
GGA2-213ENST00000568922 VN1R3Q9BXE9 311 aa13.2□□□□□ -0.3
GGA2-213ENST00000568922 POPDC2Q9HBU9 364 aa13.2□□□□□ -0.3
GGA2-213ENST00000568922 PCDH10Q9P2E7 1040 aa13.2□□□□□ -0.3
GGA2-213ENST00000568922 STAP1Q9ULZ2 295 aa13.2□□□□□ -0.3
GGA2-213ENST00000568922 INSL6Q9Y581 213 aa13.2□□□□□ -0.3
GGA2-213ENST00000568922 MTMR11A4FU01 709 aa13.19□□□□□ -0.3
GGA2-213ENST00000568922 PRPSAP2O60256 369 aa13.19□□□□□ -0.3
GGA2-213ENST00000568922 TRUB2O95900 331 aaKnown RBP13.19□□□□□ -0.3
GGA2-213ENST00000568922 KRT1P04264 644 aa13.19□□□□□ -0.3
GGA2-213ENST00000568922 USP17L7P0C7H9 530 aa13.19□□□□□ -0.3
GGA2-213ENST00000568922 SLC25A52Q3SY17 297 aa13.19□□□□□ -0.3
GGA2-213ENST00000568922 GLE1Q53GS7 698 aaKnown RBP13.19□□□□□ -0.3
GGA2-213ENST00000568922 SLC8B1Q6J4K2 584 aa13.19□□□□□ -0.3
GGA2-213ENST00000568922 RSPO2Q6UXX9 243 aaPredicted RBP13.19□□□□□ -0.3
GGA2-213ENST00000568922 STRADAQ7RTN6 431 aa13.19□□□□□ -0.3
GGA2-213ENST00000568922 DDX53Q86TM3 631 aaKnown RBP13.19□□□□□ -0.3
GGA2-213ENST00000568922 SCN4BQ8IWT1 228 aa13.19□□□□□ -0.3
GGA2-213ENST00000568922 FBXO22Q8NEZ5 403 aa13.19□□□□□ -0.3
GGA2-213ENST00000568922 PHOSPHO2Q8TCD6 241 aa13.19□□□□□ -0.3
GGA2-213ENST00000568922 NDRG1Q92597 394 aaKnown RBP13.19□□□□□ -0.3
GGA2-213ENST00000568922 PGLYRP2Q96PD5 576 aa13.19□□□□□ -0.3
GGA2-213ENST00000568922 ZBED2Q9BTP6 218 aa13.19□□□□□ -0.3
GGA2-213ENST00000568922 AP1M1Q9BXS5 423 aa13.19□□□□□ -0.3
GGA2-213ENST00000568922 MTIF3Q9H2K0 278 aaKnown RBP13.19□□□□□ -0.3
GGA2-213ENST00000568922 ZWILCHQ9H900 591 aa13.19□□□□□ -0.3
GGA2-213ENST00000568922 NGRNQ9NPE2 291 aaKnown RBP13.19□□□□□ -0.3
GGA2-213ENST00000568922 MTUS1Q9ULD2 1270 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms