RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 RPL6Q02878 288 aaKnown RBP15.83■□□□□ 0.12
USB1-214ENST00000568848 SEMA3BQ13214 749 aa15.83■□□□□ 0.12
USB1-214ENST00000568848 ORC1Q13415 861 aa15.83■□□□□ 0.12
USB1-214ENST00000568848 EGFLAMQ63HQ2 1017 aa15.83■□□□□ 0.12
USB1-214ENST00000568848 LARP1BQ659C4 914 aaKnown RBP15.83■□□□□ 0.12
USB1-214ENST00000568848 LRSAM1Q6UWE0 723 aa15.83■□□□□ 0.12
USB1-214ENST00000568848 GPD1LQ8N335 351 aa15.83■□□□□ 0.12
USB1-214ENST00000568848 SCAMP5Q8TAC9 235 aa15.83■□□□□ 0.12
USB1-214ENST00000568848 HVCN1Q96D96 273 aa15.83■□□□□ 0.12
USB1-214ENST00000568848 SPACA7Q96KW9 195 aa15.83■□□□□ 0.12
USB1-214ENST00000568848 SPATA17Q96L03 361 aa15.83■□□□□ 0.12
USB1-214ENST00000568848 KCNK16Q96T55 309 aa15.83■□□□□ 0.12
USB1-214ENST00000568848 TTLL2Q9BWV7 592 aa15.83■□□□□ 0.12
USB1-214ENST00000568848 B3GNT5Q9BYG0 378 aa15.83■□□□□ 0.12
USB1-214ENST00000568848 CCSER2Q9H7U1 834 aa15.83■□□□□ 0.12
USB1-214ENST00000568848 CHORDC1Q9UHD1 332 aaPredicted RBP15.83■□□□□ 0.12
USB1-214ENST00000568848 EXOC7Q9UPT5 735 aa15.83■□□□□ 0.12
USB1-214ENST00000568848 SMC3Q9UQE7 1217 aa15.83■□□□□ 0.12
USB1-214ENST00000568848 APC2O95996 2303 aa15.82■□□□□ 0.12
USB1-214ENST00000568848 COCHO43405 550 aa15.82■□□□□ 0.12
USB1-214ENST00000568848 SLC26A4O43511 780 aa15.82■□□□□ 0.12
USB1-214ENST00000568848 ALDH1A2O94788 518 aa15.82■□□□□ 0.12
USB1-214ENST00000568848 GARTP22102 1010 aa15.82■□□□□ 0.12
USB1-214ENST00000568848 SCP2P22307 547 aa15.82■□□□□ 0.12
USB1-214ENST00000568848 MAOBP27338 520 aa15.82■□□□□ 0.12
USB1-214ENST00000568848 C10orf76Q5T2E6 689 aa15.82■□□□□ 0.12
USB1-214ENST00000568848 RRAGBQ5VZM2 374 aa15.82■□□□□ 0.12
USB1-214ENST00000568848 TMEM25Q86YD3 366 aa15.82■□□□□ 0.12
USB1-214ENST00000568848 MINDY1Q8N5J2 469 aa15.82■□□□□ 0.12
USB1-214ENST00000568848 OR6B3Q8NGW1 331 aa15.82■□□□□ 0.12
USB1-214ENST00000568848 MYCBPAPQ8TBZ2 947 aa15.82■□□□□ 0.12
USB1-214ENST00000568848 P2RY11Q96G91 374 aa15.82■□□□□ 0.12
USB1-214ENST00000568848 ANKRD36BP1Q96IX9 119 aa15.82■□□□□ 0.12
USB1-214ENST00000568848 POLMQ9NP87 494 aaPredicted RBP15.82■□□□□ 0.12
USB1-214ENST00000568848 PANK4Q9NVE7 773 aa15.82■□□□□ 0.12
USB1-214ENST00000568848 CYP8B1Q9UNU6 501 aa15.82■□□□□ 0.12
USB1-214ENST00000568848 KIF3AQ9Y496 699 aa15.82■□□□□ 0.12
USB1-214ENST00000568848 IGSF10Q6WRI0 2623 aa15.82■□□□□ 0.12
USB1-214ENST00000568848 BPTFQ12830 3046 aa15.82■□□□□ 0.12
USB1-214ENST00000568848 TBC1D3BA6NDS4 549 aa15.81■□□□□ 0.12
USB1-214ENST00000568848 TULP3O75386 442 aa15.81■□□□□ 0.12
USB1-214ENST00000568848 DLATP10515 647 aaKnown RBP15.81■□□□□ 0.12
USB1-214ENST00000568848 CD59P13987 128 aa15.81■□□□□ 0.12
USB1-214ENST00000568848 GAP43P17677 238 aa15.81■□□□□ 0.12
USB1-214ENST00000568848 CDH8P55286 799 aa15.81■□□□□ 0.12
USB1-214ENST00000568848 ADAMTS20P59510 1910 aa15.81■□□□□ 0.12
USB1-214ENST00000568848 POU5F1Q01860 360 aaKnown RBP15.81■□□□□ 0.12
USB1-214ENST00000568848 LMAN2Q12907 356 aa15.81■□□□□ 0.12
USB1-214ENST00000568848 ANO4Q32M45 955 aa15.81■□□□□ 0.12
USB1-214ENST00000568848 EOGTQ5NDL2 527 aa15.81■□□□□ 0.12
USB1-214ENST00000568848 SLC23A3Q6PIS1 610 aa15.81■□□□□ 0.12
USB1-214ENST00000568848 VSTM1Q6UX27 236 aa15.81■□□□□ 0.12
USB1-214ENST00000568848 TOGARAM2Q6ZUX3 1019 aa15.81■□□□□ 0.12
USB1-214ENST00000568848 SV2BQ7L1I2 683 aa15.81■□□□□ 0.12
USB1-214ENST00000568848 C11orf74Q86VG3 221 aa15.81■□□□□ 0.12
USB1-214ENST00000568848 PDILTQ8N807 584 aa15.81■□□□□ 0.12
USB1-214ENST00000568848 ZNF513Q8N8E2 541 aaPredicted RBP15.81■□□□□ 0.12
USB1-214ENST00000568848 SPRYD3Q8NCJ5 442 aa15.81■□□□□ 0.12
USB1-214ENST00000568848 BHMTQ93088 406 aa15.81■□□□□ 0.12
USB1-214ENST00000568848 CCDC127Q96BQ5 260 aa15.81■□□□□ 0.12
USB1-214ENST00000568848 SMYD3Q9H7B4 428 aa15.81■□□□□ 0.12
USB1-214ENST00000568848 GMIPQ9P107 970 aa15.81■□□□□ 0.12
USB1-214ENST00000568848 MSRB2Q9Y3D2 182 aa15.81■□□□□ 0.12
USB1-214ENST00000568848 NEUROG3Q9Y4Z2 214 aa15.81■□□□□ 0.12
USB1-214ENST00000568848 PLXNB3Q9ULL4 1909 aa15.8■□□□□ 0.12
USB1-214ENST00000568848 IGHV1OR15-9A0A0B4J2B8 117 aa15.8■□□□□ 0.12
USB1-214ENST00000568848 A0A1W2PQF6 199 aa15.8■□□□□ 0.12
USB1-214ENST00000568848 CLIC2O15247 247 aa15.8■□□□□ 0.12
USB1-214ENST00000568848 SH3BP5O60239 455 aa15.8■□□□□ 0.12
USB1-214ENST00000568848 ZIC2O95409 532 aaPredicted RBP15.8■□□□□ 0.12
USB1-214ENST00000568848 ADH1CP00326 375 aa15.8■□□□□ 0.12
USB1-214ENST00000568848 TNNC2P02585 160 aa15.8■□□□□ 0.12
USB1-214ENST00000568848 HOXB2P14652 356 aa15.8■□□□□ 0.12
USB1-214ENST00000568848 PTPN1P18031 435 aaKnown RBP15.8■□□□□ 0.12
USB1-214ENST00000568848 GNL1P36915 607 aaPredicted RBP15.8■□□□□ 0.12
USB1-214ENST00000568848 GRIA2P42262 883 aa15.8■□□□□ 0.12
USB1-214ENST00000568848 CASP4P49662 377 aa15.8■□□□□ 0.12
USB1-214ENST00000568848 MYO1EQ12965 1108 aa15.8■□□□□ 0.12
USB1-214ENST00000568848 ACAP1Q15027 740 aa15.8■□□□□ 0.12
USB1-214ENST00000568848 RABEP1Q15276 862 aa15.8■□□□□ 0.12
USB1-214ENST00000568848 SCARA5Q6ZMJ2 495 aa15.8■□□□□ 0.12
USB1-214ENST00000568848 TRAPPC11Q7Z392 1133 aa15.8■□□□□ 0.12
USB1-214ENST00000568848 ETFBKMTQ8IXQ9 262 aa15.8■□□□□ 0.12
USB1-214ENST00000568848 ZNF516Q92618 1163 aa15.8■□□□□ 0.12
USB1-214ENST00000568848 FBXO32Q969P5 355 aa15.8■□□□□ 0.12
USB1-214ENST00000568848 C8orf48Q96LL4 319 aa15.8■□□□□ 0.12
USB1-214ENST00000568848 HSPA12BQ96MM6 686 aa15.8■□□□□ 0.12
USB1-214ENST00000568848 GZF1Q9H116 711 aaPredicted RBP15.8■□□□□ 0.12
USB1-214ENST00000568848 SNX25Q9H3E2 840 aa15.8■□□□□ 0.12
USB1-214ENST00000568848 SLC32A1Q9H598 525 aa15.8■□□□□ 0.12
USB1-214ENST00000568848 CAPN10Q9HC96 672 aa15.8■□□□□ 0.12
USB1-214ENST00000568848 HSPBP1Q9NZL4 362 aa15.8■□□□□ 0.12
USB1-214ENST00000568848 NXF1Q9UBU9 619 aaKnown RBP15.8■□□□□ 0.12
USB1-214ENST00000568848 STK17AQ9UEE5 414 aa15.8■□□□□ 0.12
USB1-214ENST00000568848 GCN1Q92616 2671 aaKnown RBP15.79■□□□□ 0.12
USB1-214ENST00000568848 FRMD3A2A2Y4 597 aa15.79■□□□□ 0.12
USB1-214ENST00000568848 WASH3PC4AMC7 463 aa15.79■□□□□ 0.12
USB1-214ENST00000568848 TRIM66O15016 1216 aa15.79■□□□□ 0.12
USB1-214ENST00000568848 MDM4O15151 490 aa15.79■□□□□ 0.12
USB1-214ENST00000568848 TBX18O95935 607 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms