RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 MMRN2Q9H8L6 949 aa8.66□□□□□ -1.02
HDGFL3-205ENST00000568129 CYLDQ9NQC7 956 aa8.66□□□□□ -1.02
HDGFL3-205ENST00000568129 KRT82Q9NSB4 513 aa8.66□□□□□ -1.02
HDGFL3-205ENST00000568129 FAM49BQ9NUQ9 324 aa8.66□□□□□ -1.02
HDGFL3-205ENST00000568129 GTSE1Q9NYZ3 720 aa8.66□□□□□ -1.02
HDGFL3-205ENST00000568129 PIAS3Q9Y6X2 628 aa8.66□□□□□ -1.02
HDGFL3-205ENST00000568129 DMDP11532 3685 aa8.66□□□□□ -1.02
HDGFL3-205ENST00000568129 SPAG17Q6Q759 2223 aa8.65□□□□□ -1.02
HDGFL3-205ENST00000568129 USP34Q70CQ2 3546 aa8.65□□□□□ -1.02
HDGFL3-205ENST00000568129 MYO15AQ9UKN7 3530 aa8.65□□□□□ -1.02
HDGFL3-205ENST00000568129 A0A0A0MRY4 1105 aa8.65□□□□□ -1.02
HDGFL3-205ENST00000568129 SPECC1L-ADORA2AF8WAN1 911 aa8.65□□□□□ -1.02
HDGFL3-205ENST00000568129 RNF225M0QZC1 329 aaPredicted RBP8.65□□□□□ -1.02
HDGFL3-205ENST00000568129 GREM1O60565 184 aa8.65□□□□□ -1.02
HDGFL3-205ENST00000568129 PAPSS2O95340 614 aaPredicted RBP8.65□□□□□ -1.02
HDGFL3-205ENST00000568129 AFPP02771 609 aaKnown RBP8.65□□□□□ -1.02
HDGFL3-205ENST00000568129 DCNP07585 359 aaKnown RBP8.65□□□□□ -1.02
HDGFL3-205ENST00000568129 CCDC192P0DO97 292 aa8.65□□□□□ -1.02
HDGFL3-205ENST00000568129 VDRP11473 427 aa8.65□□□□□ -1.02
HDGFL3-205ENST00000568129 TDGF1P13385 188 aa8.65□□□□□ -1.02
HDGFL3-205ENST00000568129 CD72P21854 359 aa8.65□□□□□ -1.02
HDGFL3-205ENST00000568129 RPL34P49207 117 aaKnown RBP8.65□□□□□ -1.02
HDGFL3-205ENST00000568129 PGFP49763 221 aa8.65□□□□□ -1.02
HDGFL3-205ENST00000568129 PSEN1P49768 467 aa8.65□□□□□ -1.02
HDGFL3-205ENST00000568129 ZNF132P52740 706 aa8.65□□□□□ -1.02
HDGFL3-205ENST00000568129 STX17P56962 302 aa8.65□□□□□ -1.02
HDGFL3-205ENST00000568129 MAP3K7CLP57077 242 aa8.65□□□□□ -1.02
HDGFL3-205ENST00000568129 YWHAEP62258 255 aaKnown RBP8.65□□□□□ -1.02
HDGFL3-205ENST00000568129 CETN1Q12798 172 aa8.65□□□□□ -1.02
HDGFL3-205ENST00000568129 ORC1Q13415 861 aa8.65□□□□□ -1.02
HDGFL3-205ENST00000568129 CCINQ13939 588 aa8.65□□□□□ -1.02
HDGFL3-205ENST00000568129 MTF1Q14872 753 aa8.65□□□□□ -1.02
HDGFL3-205ENST00000568129 ANGPT1Q15389 498 aa8.65□□□□□ -1.02
HDGFL3-205ENST00000568129 GAB4Q2WGN9 574 aa8.65□□□□□ -1.02
HDGFL3-205ENST00000568129 CCDC40Q4G0X9 1142 aa8.65□□□□□ -1.02
HDGFL3-205ENST00000568129 TMEM196Q5HYL7 178 aa8.65□□□□□ -1.02
HDGFL3-205ENST00000568129 HECTD3Q5T447 861 aa8.65□□□□□ -1.02
HDGFL3-205ENST00000568129 PM20D1Q6GTS8 502 aa8.65□□□□□ -1.02
HDGFL3-205ENST00000568129 TXNDC11Q6PKC3 985 aa8.65□□□□□ -1.02
HDGFL3-205ENST00000568129 GPRIN1Q7Z2K8 1008 aa8.65□□□□□ -1.02
HDGFL3-205ENST00000568129 GPIHBP1Q8IV16 184 aa8.65□□□□□ -1.02
HDGFL3-205ENST00000568129 YAF2Q8IY57 180 aa8.65□□□□□ -1.02
HDGFL3-205ENST00000568129 ADGRG2Q8IZP9 1017 aa8.65□□□□□ -1.02
HDGFL3-205ENST00000568129 CSGALNACT1Q8TDX6 532 aa8.65□□□□□ -1.02
HDGFL3-205ENST00000568129 SH3RF2Q8TEC5 729 aa8.65□□□□□ -1.02
HDGFL3-205ENST00000568129 FBXO32Q969P5 355 aa8.65□□□□□ -1.02
HDGFL3-205ENST00000568129 ZFYVE19Q96K21 471 aa8.65□□□□□ -1.02
HDGFL3-205ENST00000568129 HEXIM2Q96MH2 286 aaKnown RBP8.65□□□□□ -1.02
HDGFL3-205ENST00000568129 GBP4Q96PP9 640 aa8.65□□□□□ -1.02
HDGFL3-205ENST00000568129 MED10Q9BTT4 135 aa8.65□□□□□ -1.02
HDGFL3-205ENST00000568129 NUP62CLQ9H1M0 184 aa8.65□□□□□ -1.02
HDGFL3-205ENST00000568129 THAP9Q9H5L6 903 aa8.65□□□□□ -1.02
HDGFL3-205ENST00000568129 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.65□□□□□ -1.02
HDGFL3-205ENST00000568129 PRMT8Q9NR22 394 aaPredicted RBP8.65□□□□□ -1.02
HDGFL3-205ENST00000568129 CHORDC1Q9UHD1 332 aaPredicted RBP8.65□□□□□ -1.02
HDGFL3-205ENST00000568129 FBXO4Q9UKT5 387 aa8.65□□□□□ -1.02
HDGFL3-205ENST00000568129 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.65□□□□□ -1.02
HDGFL3-205ENST00000568129 E2F8A0AVK6 867 aa8.64□□□□□ -1.03
HDGFL3-205ENST00000568129 H0Y858 1186 aa8.64□□□□□ -1.03
HDGFL3-205ENST00000568129 LEFTY2O00292 366 aa8.64□□□□□ -1.03
HDGFL3-205ENST00000568129 O00370 1275 aa8.64□□□□□ -1.03
HDGFL3-205ENST00000568129 COCHO43405 550 aa8.64□□□□□ -1.03
HDGFL3-205ENST00000568129 CKMP06732 381 aa8.64□□□□□ -1.03
HDGFL3-205ENST00000568129 CD58P19256 250 aa8.64□□□□□ -1.03
HDGFL3-205ENST00000568129 HOXA6P31267 233 aa8.64□□□□□ -1.03
HDGFL3-205ENST00000568129 TNK2Q07912 1038 aa8.64□□□□□ -1.03
HDGFL3-205ENST00000568129 GAS6Q14393 721 aa8.64□□□□□ -1.03
HDGFL3-205ENST00000568129 STILQ15468 1287 aa8.64□□□□□ -1.03
HDGFL3-205ENST00000568129 CNGA2Q16280 664 aa8.64□□□□□ -1.03
HDGFL3-205ENST00000568129 MEA1Q16626 185 aa8.64□□□□□ -1.03
HDGFL3-205ENST00000568129 DPCR1Q3MIW9 517 aa8.64□□□□□ -1.03
HDGFL3-205ENST00000568129 ZNF394Q53GI3 561 aa8.64□□□□□ -1.03
HDGFL3-205ENST00000568129 DGKKQ5KSL6 1271 aa8.64□□□□□ -1.03
HDGFL3-205ENST00000568129 LCLAT1Q6UWP7 414 aa8.64□□□□□ -1.03
HDGFL3-205ENST00000568129 ENOSF1Q7L5Y1 443 aa8.64□□□□□ -1.03
HDGFL3-205ENST00000568129 BHLHA9Q7RTU4 235 aa8.64□□□□□ -1.03
HDGFL3-205ENST00000568129 TTC30AQ86WT1 665 aa8.64□□□□□ -1.03
HDGFL3-205ENST00000568129 DDX42Q86XP3 938 aaKnown RBP eCLIP8.64□□□□□ -1.03
HDGFL3-205ENST00000568129 SLC35F5Q8WV83 523 aa8.64□□□□□ -1.03
HDGFL3-205ENST00000568129 KCTD13Q8WZ19 329 aa8.64□□□□□ -1.03
HDGFL3-205ENST00000568129 ATP2A3Q93084 1043 aa8.64□□□□□ -1.03
HDGFL3-205ENST00000568129 OTUB2Q96DC9 234 aa8.64□□□□□ -1.03
HDGFL3-205ENST00000568129 FAM81BQ96LP2 452 aa8.64□□□□□ -1.03
HDGFL3-205ENST00000568129 KREMEN1Q96MU8 473 aa8.64□□□□□ -1.03
HDGFL3-205ENST00000568129 NT5C1BQ96P26 610 aa8.64□□□□□ -1.03
HDGFL3-205ENST00000568129 ZSWIM1Q9BR11 485 aa8.64□□□□□ -1.03
HDGFL3-205ENST00000568129 KLF16Q9BXK1 252 aaPredicted RBP8.64□□□□□ -1.03
HDGFL3-205ENST00000568129 LINC00597Q9H2U6 94 aa8.64□□□□□ -1.03
HDGFL3-205ENST00000568129 EBF3Q9H4W6 596 aa8.64□□□□□ -1.03
HDGFL3-205ENST00000568129 ECT2Q9H8V3 914 aa8.64□□□□□ -1.03
HDGFL3-205ENST00000568129 LMAN1LQ9HAT1 526 aa8.64□□□□□ -1.03
HDGFL3-205ENST00000568129 TLR8Q9NR97 1041 aaKnown RBP8.64□□□□□ -1.03
HDGFL3-205ENST00000568129 OSER1Q9NX31 292 aa8.64□□□□□ -1.03
HDGFL3-205ENST00000568129 CLIC5Q9NZA1 410 aa8.64□□□□□ -1.03
HDGFL3-205ENST00000568129 FAM186AA6NE01 2351 aa8.64□□□□□ -1.03
HDGFL3-205ENST00000568129 RALGAPA1Q6GYQ0 2036 aa8.63□□□□□ -1.03
HDGFL3-205ENST00000568129 PLXND1Q9Y4D7 1925 aa8.63□□□□□ -1.03
HDGFL3-205ENST00000568129 STK25O00506 426 aa8.63□□□□□ -1.03
HDGFL3-205ENST00000568129 SLC9A3R1O14745 358 aaPredicted RBP8.63□□□□□ -1.03
HDGFL3-205ENST00000568129 XPO1O14980 1071 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms