RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 DCLRE1AQ6PJP8 1040 aa8.29□□□□□ -1.08
SMG1-214ENST00000568038 SARM1Q6SZW1 724 aa8.29□□□□□ -1.08
SMG1-214ENST00000568038 TP53INP2Q8IXH6 220 aa8.29□□□□□ -1.08
SMG1-214ENST00000568038 TDHQ8IZJ6 230 aa8.29□□□□□ -1.08
SMG1-214ENST00000568038 LMO3Q8TAP4 145 aa8.29□□□□□ -1.08
SMG1-214ENST00000568038 CXorf38Q8TB03 319 aa8.29□□□□□ -1.08
SMG1-214ENST00000568038 RSPH1Q8WYR4 309 aa8.29□□□□□ -1.08
SMG1-214ENST00000568038 HPDLQ96IR7 371 aa8.29□□□□□ -1.08
SMG1-214ENST00000568038 ZNF560Q96MR9 790 aa8.29□□□□□ -1.08
SMG1-214ENST00000568038 UROC1Q96N76 676 aa8.29□□□□□ -1.08
SMG1-214ENST00000568038 COLEC11Q9BWP8 271 aa8.29□□□□□ -1.08
SMG1-214ENST00000568038 LSM14BQ9BX40 385 aaKnown RBP8.29□□□□□ -1.08
SMG1-214ENST00000568038 IMPG2Q9BZV3 1241 aa8.29□□□□□ -1.08
SMG1-214ENST00000568038 GSX1Q9H4S2 264 aaPredicted RBP8.29□□□□□ -1.08
SMG1-214ENST00000568038 C1GALT1Q9NS00 363 aa8.29□□□□□ -1.08
SMG1-214ENST00000568038 GCNT4Q9P109 453 aa8.29□□□□□ -1.08
SMG1-214ENST00000568038 COQ4Q9Y3A0 265 aa8.29□□□□□ -1.08
SMG1-214ENST00000568038 NUB1Q9Y5A7 615 aa8.29□□□□□ -1.08
SMG1-214ENST00000568038 PDCD11Q14690 1871 aaKnown RBP8.29□□□□□ -1.08
SMG1-214ENST00000568038 COL4A6Q14031 1691 aa8.28□□□□□ -1.08
SMG1-214ENST00000568038 GTPBP10A4D1E9 387 aaKnown RBP8.28□□□□□ -1.08
SMG1-214ENST00000568038 I3L4J1 428 aa8.28□□□□□ -1.08
SMG1-214ENST00000568038 TADA2AO75478 443 aa8.28□□□□□ -1.08
SMG1-214ENST00000568038 ITGB1P05556 798 aa8.28□□□□□ -1.08
SMG1-214ENST00000568038 LAG3P18627 525 aa8.28□□□□□ -1.08
SMG1-214ENST00000568038 PON1P27169 355 aa8.28□□□□□ -1.08
SMG1-214ENST00000568038 ATICP31939 592 aa8.28□□□□□ -1.08
SMG1-214ENST00000568038 BRCC3P46736 316 aa8.28□□□□□ -1.08
SMG1-214ENST00000568038 TAF6P49848 677 aa8.28□□□□□ -1.08
SMG1-214ENST00000568038 MRE11P49959 708 aa8.28□□□□□ -1.08
SMG1-214ENST00000568038 ZNF75DP51815 510 aa8.28□□□□□ -1.08
SMG1-214ENST00000568038 LILRA4P59901 499 aa8.28□□□□□ -1.08
SMG1-214ENST00000568038 NOP14P78316 857 aaKnown RBP8.28□□□□□ -1.08
SMG1-214ENST00000568038 ID3Q02535 119 aa8.28□□□□□ -1.08
SMG1-214ENST00000568038 MYO1EQ12965 1108 aa8.28□□□□□ -1.08
SMG1-214ENST00000568038 SGSM1Q2NKQ1 1148 aa8.28□□□□□ -1.08
SMG1-214ENST00000568038 WDR72Q3MJ13 1102 aa8.28□□□□□ -1.08
SMG1-214ENST00000568038 ZNF667Q5HYK9 610 aa8.28□□□□□ -1.08
SMG1-214ENST00000568038 GJB7Q6PEY0 223 aa8.28□□□□□ -1.08
SMG1-214ENST00000568038 TRIM65Q6PJ69 517 aa8.28□□□□□ -1.08
SMG1-214ENST00000568038 KCNT2Q6UVM3 1135 aa8.28□□□□□ -1.08
SMG1-214ENST00000568038 CD300LGQ6UXG3 332 aa8.28□□□□□ -1.08
SMG1-214ENST00000568038 DSTYKQ6XUX3 929 aa8.28□□□□□ -1.08
SMG1-214ENST00000568038 LRRC52Q8N7C0 313 aa8.28□□□□□ -1.08
SMG1-214ENST00000568038 COLGALT1Q8NBJ5 622 aa8.28□□□□□ -1.08
SMG1-214ENST00000568038 CCDC150Q8NCX0 1101 aa8.28□□□□□ -1.08
SMG1-214ENST00000568038 C3orf58Q8NDZ4 430 aa8.28□□□□□ -1.08
SMG1-214ENST00000568038 ZNF558Q96NG5 402 aa8.28□□□□□ -1.08
SMG1-214ENST00000568038 NT5C1BQ96P26 610 aa8.28□□□□□ -1.08
SMG1-214ENST00000568038 ERGIC2Q96RQ1 377 aa8.28□□□□□ -1.08
SMG1-214ENST00000568038 TMEM175Q9BSA9 504 aa8.28□□□□□ -1.08
SMG1-214ENST00000568038 XYLT2Q9H1B5 865 aa8.28□□□□□ -1.08
SMG1-214ENST00000568038 APOBEC3GQ9HC16 384 aaKnown RBP8.28□□□□□ -1.08
SMG1-214ENST00000568038 FAM207AQ9NSI2 230 aaPredicted RBP8.28□□□□□ -1.08
SMG1-214ENST00000568038 CRIM1Q9NZV1 1036 aa8.28□□□□□ -1.08
SMG1-214ENST00000568038 ZC3H7BQ9UGR2 993 aaKnown RBP8.28□□□□□ -1.08
SMG1-214ENST00000568038 SIK3Q9Y2K2 1263 aa8.28□□□□□ -1.08
SMG1-214ENST00000568038 YBX2Q9Y2T7 364 aaKnown RBP8.28□□□□□ -1.08
SMG1-214ENST00000568038 PCDHA11Q9Y5I1 949 aa8.28□□□□□ -1.08
SMG1-214ENST00000568038 SNX9Q9Y5X1 595 aa8.28□□□□□ -1.08
SMG1-214ENST00000568038 SCN1AP35498 2009 aa8.27□□□□□ -1.09
SMG1-214ENST00000568038 LINC01553A4QN01 128 aa8.27□□□□□ -1.09
SMG1-214ENST00000568038 KPNA7A9QM74 516 aa8.27□□□□□ -1.09
SMG1-214ENST00000568038 CYB561D2O14569 222 aa8.27□□□□□ -1.09
SMG1-214ENST00000568038 EPHB6O15197 1021 aa8.27□□□□□ -1.09
SMG1-214ENST00000568038 ADCY5O95622 1261 aa8.27□□□□□ -1.09
SMG1-214ENST00000568038 ASS1P00966 412 aaKnown RBP8.27□□□□□ -1.09
SMG1-214ENST00000568038 CA3P07451 260 aa8.27□□□□□ -1.09
SMG1-214ENST00000568038 PNPLA4P41247 253 aa8.27□□□□□ -1.09
SMG1-214ENST00000568038 MAPK8P45983 427 aa8.27□□□□□ -1.09
SMG1-214ENST00000568038 TNNC1P63316 161 aa8.27□□□□□ -1.09
SMG1-214ENST00000568038 CDK5R2Q13319 367 aa8.27□□□□□ -1.09
SMG1-214ENST00000568038 SV2CQ496J9 727 aa8.27□□□□□ -1.09
SMG1-214ENST00000568038 TIGD5Q53EQ6 642 aa8.27□□□□□ -1.09
SMG1-214ENST00000568038 KLHDC7AQ5VTJ3 777 aa8.27□□□□□ -1.09
SMG1-214ENST00000568038 SEZ6L2Q6UXD5 910 aa8.27□□□□□ -1.09
SMG1-214ENST00000568038 SCARA5Q6ZMJ2 495 aa8.27□□□□□ -1.09
SMG1-214ENST00000568038 RRAGAQ7L523 313 aa8.27□□□□□ -1.09
SMG1-214ENST00000568038 SPRED2Q7Z698 418 aa8.27□□□□□ -1.09
SMG1-214ENST00000568038 TMEM173Q86WV6 379 aaPredicted RBP8.27□□□□□ -1.09
SMG1-214ENST00000568038 ARHGEF19Q8IW93 802 aa8.27□□□□□ -1.09
SMG1-214ENST00000568038 PPM1KQ8N3J5 372 aa8.27□□□□□ -1.09
SMG1-214ENST00000568038 NEK11Q8NG66 645 aa8.27□□□□□ -1.09
SMG1-214ENST00000568038 BCL7CQ8WUZ0 217 aaPredicted RBP8.27□□□□□ -1.09
SMG1-214ENST00000568038 SENP8Q96LD8 212 aa8.27□□□□□ -1.09
SMG1-214ENST00000568038 FANCD2OSQ96PS1 177 aa8.27□□□□□ -1.09
SMG1-214ENST00000568038 MMS19Q96T76 1030 aa8.27□□□□□ -1.09
SMG1-214ENST00000568038 NKX2-4Q9H2Z4 354 aa8.27□□□□□ -1.09
SMG1-214ENST00000568038 ATXN3LQ9H3M9 355 aa8.27□□□□□ -1.09
SMG1-214ENST00000568038 SIX2Q9NPC8 291 aa8.27□□□□□ -1.09
SMG1-214ENST00000568038 UBE2TQ9NPD8 197 aaPredicted RBP8.27□□□□□ -1.09
SMG1-214ENST00000568038 MARCH5Q9NX47 278 aa8.27□□□□□ -1.09
SMG1-214ENST00000568038 SPG21Q9NZD8 308 aa8.27□□□□□ -1.09
SMG1-214ENST00000568038 ADGRE2Q9UHX3 823 aa8.27□□□□□ -1.09
SMG1-214ENST00000568038 MSRAQ9UJ68 235 aa8.27□□□□□ -1.09
SMG1-214ENST00000568038 PCDHB12Q9Y5F1 795 aa8.27□□□□□ -1.09
SMG1-214ENST00000568038 A0A1W2PQC6 194 aa8.26□□□□□ -1.09
SMG1-214ENST00000568038 TMEM189-UBE2V1I3L0A0 370 aa8.26□□□□□ -1.09
SMG1-214ENST00000568038 HUS1O60921 280 aa8.26□□□□□ -1.09
SMG1-214ENST00000568038 NOL4O94818 638 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms