RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 DNAI2Q9GZS0 605 aa26.64■■□□□ 1.86
FANCA-228ENST00000567943 PRMT8Q9NR22 394 aaPredicted RBP26.64■■□□□ 1.86
FANCA-228ENST00000567943 WNT6Q9Y6F9 365 aa26.64■■□□□ 1.86
FANCA-228ENST00000567943 ATG2BQ96BY7 2078 aa26.64■■□□□ 1.85
FANCA-228ENST00000567943 MYO16Q9Y6X6 1858 aa26.64■■□□□ 1.85
FANCA-228ENST00000567943 RTN3O95197 1032 aaPredicted RBP26.63■■□□□ 1.85
FANCA-228ENST00000567943 CCDC192P0DO97 292 aa26.63■■□□□ 1.85
FANCA-228ENST00000567943 MAP3K7CLP57077 242 aa26.63■■□□□ 1.85
FANCA-228ENST00000567943 SLC7A9P82251 487 aa26.63■■□□□ 1.85
FANCA-228ENST00000567943 CCINQ13939 588 aa26.63■■□□□ 1.85
FANCA-228ENST00000567943 ZNF528Q3MIS6 628 aa26.63■■□□□ 1.85
FANCA-228ENST00000567943 DPCR1Q3MIW9 517 aa26.63■■□□□ 1.85
FANCA-228ENST00000567943 CC2D1AQ6P1N0 951 aaPredicted RBP26.63■■□□□ 1.85
FANCA-228ENST00000567943 TSSK4Q6SA08 328 aa26.63■■□□□ 1.85
FANCA-228ENST00000567943 TTC39CQ8N584 583 aa26.63■■□□□ 1.85
FANCA-228ENST00000567943 TTC16Q8NEE8 873 aa26.63■■□□□ 1.85
FANCA-228ENST00000567943 CYFIP2Q96F07 1278 aa26.63■■□□□ 1.85
FANCA-228ENST00000567943 LINC00597Q9H2U6 94 aa26.63■■□□□ 1.85
FANCA-228ENST00000567943 CHORDC1Q9UHD1 332 aaPredicted RBP26.63■■□□□ 1.85
FANCA-228ENST00000567943 UTP18Q9Y5J1 556 aaKnown RBP eCLIP26.63■■□□□ 1.85
FANCA-228ENST00000567943 ZNF292O60281 2723 aa26.63■■□□□ 1.85
FANCA-228ENST00000567943 PTPRZ1P23471 2315 aaPredicted RBP26.62■■□□□ 1.85
FANCA-228ENST00000567943 HHLA1C9JL84 531 aa26.62■■□□□ 1.85
FANCA-228ENST00000567943 PMM2O15305 246 aa26.62■■□□□ 1.85
FANCA-228ENST00000567943 ABL1P00519 1130 aa26.62■■□□□ 1.85
FANCA-228ENST00000567943 TDGF1P13385 188 aa26.62■■□□□ 1.85
FANCA-228ENST00000567943 CSTF1Q05048 431 aaKnown RBP26.62■■□□□ 1.85
FANCA-228ENST00000567943 CETN1Q12798 172 aa26.62■■□□□ 1.85
FANCA-228ENST00000567943 KCNH2Q12809 1159 aa26.62■■□□□ 1.85
FANCA-228ENST00000567943 CUL2Q13617 745 aa26.62■■□□□ 1.85
FANCA-228ENST00000567943 PDGFRLQ15198 375 aa26.62■■□□□ 1.85
FANCA-228ENST00000567943 EML3Q32P44 896 aa26.62■■□□□ 1.85
FANCA-228ENST00000567943 NAIF1Q69YI7 327 aaPredicted RBP26.62■■□□□ 1.85
FANCA-228ENST00000567943 Q6ZS52 159 aa26.62■■□□□ 1.85
FANCA-228ENST00000567943 CLEC20AQ6ZU45 233 aa26.62■■□□□ 1.85
FANCA-228ENST00000567943 GPRIN1Q7Z2K8 1008 aa26.62■■□□□ 1.85
FANCA-228ENST00000567943 NELL1Q92832 810 aa26.62■■□□□ 1.85
FANCA-228ENST00000567943 NKD2Q969F2 451 aaPredicted RBP26.62■■□□□ 1.85
FANCA-228ENST00000567943 FBXO32Q969P5 355 aa26.62■■□□□ 1.85
FANCA-228ENST00000567943 DUS2Q9NX74 493 aaKnown RBP26.62■■□□□ 1.85
FANCA-228ENST00000567943 LEFTY2O00292 366 aa26.61■■□□□ 1.85
FANCA-228ENST00000567943 ZDHHC11BP0C7U3 371 aa26.61■■□□□ 1.85
FANCA-228ENST00000567943 FAM200BP0CF97 657 aa26.61■■□□□ 1.85
FANCA-228ENST00000567943 PDE6CP51160 858 aa26.61■■□□□ 1.85
FANCA-228ENST00000567943 SNX30Q5VWJ9 437 aa26.61■■□□□ 1.85
FANCA-228ENST00000567943 CREBRFQ8IUR6 639 aa26.61■■□□□ 1.85
FANCA-228ENST00000567943 OVCA2Q8WZ82 227 aa26.61■■□□□ 1.85
FANCA-228ENST00000567943 HEXIM2Q96MH2 286 aaKnown RBP26.61■■□□□ 1.85
FANCA-228ENST00000567943 ECT2Q9H8V3 914 aa26.61■■□□□ 1.85
FANCA-228ENST00000567943 FBRSL1Q9HCM7 1045 aaKnown RBP26.61■■□□□ 1.85
FANCA-228ENST00000567943 C2orf42Q9NWW7 574 aa26.61■■□□□ 1.85
FANCA-228ENST00000567943 MYOFQ9NZM1 2061 aa26.61■■□□□ 1.85
FANCA-228ENST00000567943 P4HA2O15460 535 aa26.6■■□□□ 1.85
FANCA-228ENST00000567943 AFPP02771 609 aaKnown RBP26.6■■□□□ 1.85
FANCA-228ENST00000567943 GJA4P35212 333 aa26.6■■□□□ 1.85
FANCA-228ENST00000567943 RAD23BP54727 409 aa26.6■■□□□ 1.85
FANCA-228ENST00000567943 TPD52L1Q16890 204 aaPredicted RBP26.6■■□□□ 1.85
FANCA-228ENST00000567943 TMEM196Q5HYL7 178 aa26.6■■□□□ 1.85
FANCA-228ENST00000567943 PPP1R26Q5T8A7 1209 aaPredicted RBP26.6■■□□□ 1.85
FANCA-228ENST00000567943 SLC4A11Q8NBS3 891 aa26.6■■□□□ 1.85
FANCA-228ENST00000567943 TMEM176AQ96HP8 235 aa26.6■■□□□ 1.85
FANCA-228ENST00000567943 ZFRQ96KR1 1074 aaKnown RBP26.6■■□□□ 1.85
FANCA-228ENST00000567943 CNOT6LQ96LI5 555 aaKnown RBP26.6■■□□□ 1.85
FANCA-228ENST00000567943 NT5C1BQ96P26 610 aa26.6■■□□□ 1.85
FANCA-228ENST00000567943 FAM124BQ9H5Z6 455 aaPredicted RBP26.6■■□□□ 1.85
FANCA-228ENST00000567943 COMMD8Q9NX08 183 aa26.6■■□□□ 1.85
FANCA-228ENST00000567943 SMPD4Q9NXE4 827 aa26.6■■□□□ 1.85
FANCA-228ENST00000567943 GMIPQ9P107 970 aa26.6■■□□□ 1.85
FANCA-228ENST00000567943 CPQQ9Y646 472 aa26.6■■□□□ 1.85
FANCA-228ENST00000567943 EP300Q09472 2414 aaPredicted RBP26.59■■□□□ 1.85
FANCA-228ENST00000567943 GVINP1Q7Z2Y8 2422 aa26.59■■□□□ 1.85
FANCA-228ENST00000567943 COCHO43405 550 aa26.59■■□□□ 1.85
FANCA-228ENST00000567943 FSTL4Q6MZW2 842 aa26.59■■□□□ 1.85
FANCA-228ENST00000567943 PDZD8Q8NEN9 1154 aa26.59■■□□□ 1.85
FANCA-228ENST00000567943 IER2Q9BTL4 223 aa26.59■■□□□ 1.85
FANCA-228ENST00000567943 DACH1Q9UI36 760 aa26.59■■□□□ 1.85
FANCA-228ENST00000567943 OTOGLQ3ZCN5 2332 aa26.58■■□□□ 1.85
FANCA-228ENST00000567943 TRDMT1O14717 391 aaKnown RBP26.58■■□□□ 1.85
FANCA-228ENST00000567943 TBXAS1P24557 533 aaPredicted RBP26.58■■□□□ 1.85
FANCA-228ENST00000567943 YWHAEP62258 255 aaKnown RBP26.58■■□□□ 1.85
FANCA-228ENST00000567943 SATB1Q01826 763 aa26.58■■□□□ 1.85
FANCA-228ENST00000567943 LRRC32Q14392 662 aa26.58■■□□□ 1.85
FANCA-228ENST00000567943 DGKKQ5KSL6 1271 aa26.58■■□□□ 1.85
FANCA-228ENST00000567943 LMO3Q8TAP4 145 aa26.58■■□□□ 1.85
FANCA-228ENST00000567943 JAKMIP2Q96AA8 810 aa26.58■■□□□ 1.85
FANCA-228ENST00000567943 CCSER2Q9H7U1 834 aa26.58■■□□□ 1.85
FANCA-228ENST00000567943 GPR179Q6PRD1 2367 aa26.58■■□□□ 1.85
FANCA-228ENST00000567943 SCAMP3O14828 347 aaKnown RBP26.57■■□□□ 1.84
FANCA-228ENST00000567943 HOXC13P31276 330 aa26.57■■□□□ 1.84
FANCA-228ENST00000567943 IFNAR2P48551 515 aa26.57■■□□□ 1.84
FANCA-228ENST00000567943 GAB4Q2WGN9 574 aa26.57■■□□□ 1.84
FANCA-228ENST00000567943 IRF2BP1Q8IU81 584 aa26.57■■□□□ 1.84
FANCA-228ENST00000567943 SPEM1Q8N4L4 309 aa26.57■■□□□ 1.84
FANCA-228ENST00000567943 ZBTB44Q8NCP5 570 aa26.57■■□□□ 1.84
FANCA-228ENST00000567943 EHBP1Q8NDI1 1231 aa26.57■■□□□ 1.84
FANCA-228ENST00000567943 ATP2A3Q93084 1043 aa26.57■■□□□ 1.84
FANCA-228ENST00000567943 KIAA1549LQ6ZVL6 1849 aa26.57■■□□□ 1.84
FANCA-228ENST00000567943 ERCC5P28715 1186 aaPredicted RBP26.56■■□□□ 1.84
FANCA-228ENST00000567943 GALK1P51570 392 aa26.56■■□□□ 1.84
FANCA-228ENST00000567943 HECTD3Q5T447 861 aa26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms