RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 NAT8LQ8N9F0 302 aa18.53■□□□□ 0.56
CMTM3-214ENST00000567572 KIF12Q96FN5 646 aa18.53■□□□□ 0.56
CMTM3-214ENST00000567572 HPDLQ96IR7 371 aa18.53■□□□□ 0.56
CMTM3-214ENST00000567572 UPF3AQ9H1J1 476 aaKnown RBP18.53■□□□□ 0.56
CMTM3-214ENST00000567572 SYNCQ9H7C4 482 aa18.53■□□□□ 0.56
CMTM3-214ENST00000567572 RSAD1Q9HA92 442 aa18.53■□□□□ 0.56
CMTM3-214ENST00000567572 GPBP1L1Q9HC44 474 aaPredicted RBP18.53■□□□□ 0.56
CMTM3-214ENST00000567572 SNTG2Q9NY99 539 aa18.53■□□□□ 0.56
CMTM3-214ENST00000567572 KIAA1257Q9ULG3 409 aa18.53■□□□□ 0.56
CMTM3-214ENST00000567572 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.53■□□□□ 0.56
CMTM3-214ENST00000567572 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.53■□□□□ 0.56
CMTM3-214ENST00000567572 CST8O60676 142 aa18.53■□□□□ 0.56
CMTM3-214ENST00000567572 RNF8O76064 485 aa18.53■□□□□ 0.56
CMTM3-214ENST00000567572 VDRP11473 427 aa18.53■□□□□ 0.56
CMTM3-214ENST00000567572 CTCFP49711 727 aaPredicted RBP18.53■□□□□ 0.56
CMTM3-214ENST00000567572 CDH8P55286 799 aa18.53■□□□□ 0.56
CMTM3-214ENST00000567572 RBP5P82980 135 aa18.53■□□□□ 0.56
CMTM3-214ENST00000567572 PDIA2Q13087 525 aaKnown RBP18.53■□□□□ 0.56
CMTM3-214ENST00000567572 PDK4Q16654 411 aa18.53■□□□□ 0.56
CMTM3-214ENST00000567572 CCDC91Q7Z6B0 441 aa18.53■□□□□ 0.56
CMTM3-214ENST00000567572 PRUNE1Q86TP1 453 aa18.53■□□□□ 0.56
CMTM3-214ENST00000567572 NME8Q8N427 588 aa18.53■□□□□ 0.56
CMTM3-214ENST00000567572 RSAD2Q8WXG1 361 aa18.53■□□□□ 0.56
CMTM3-214ENST00000567572 ALKBH8Q96BT7 664 aaKnown RBP18.53■□□□□ 0.56
CMTM3-214ENST00000567572 ASNSD1Q9NWL6 643 aa18.53■□□□□ 0.56
CMTM3-214ENST00000567572 ZMYND8Q9ULU4 1186 aaPredicted RBP18.53■□□□□ 0.56
CMTM3-214ENST00000567572 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.53■□□□□ 0.56
CMTM3-214ENST00000567572 AGAP1Q9UPQ3 857 aa18.53■□□□□ 0.56
CMTM3-214ENST00000567572 SCN10AQ9Y5Y9 1956 aa18.52■□□□□ 0.56
CMTM3-214ENST00000567572 GOLGA8SH3BPF8 625 aa18.52■□□□□ 0.56
CMTM3-214ENST00000567572 IFNB1P01574 187 aa18.52■□□□□ 0.56
CMTM3-214ENST00000567572 KRT15P19012 456 aa18.52■□□□□ 0.56
CMTM3-214ENST00000567572 CRYBB1P53674 252 aaPredicted RBP18.52■□□□□ 0.56
CMTM3-214ENST00000567572 WDR4P57081 412 aaKnown RBP18.52■□□□□ 0.56
CMTM3-214ENST00000567572 NCALDP61601 193 aa18.52■□□□□ 0.56
CMTM3-214ENST00000567572 NKX3-2P78367 333 aa18.52■□□□□ 0.56
CMTM3-214ENST00000567572 STILQ15468 1287 aa18.52■□□□□ 0.56
CMTM3-214ENST00000567572 SPDYAQ5MJ70 313 aa18.52■□□□□ 0.56
CMTM3-214ENST00000567572 ARFGAP1Q8N6T3 406 aa18.52■□□□□ 0.56
CMTM3-214ENST00000567572 SLC4A11Q8NBS3 891 aa18.52■□□□□ 0.56
CMTM3-214ENST00000567572 JOSD2Q8TAC2 188 aa18.52■□□□□ 0.56
CMTM3-214ENST00000567572 TMEM176AQ96HP8 235 aa18.52■□□□□ 0.56
CMTM3-214ENST00000567572 CPXM1Q96SM3 734 aa18.52■□□□□ 0.56
CMTM3-214ENST00000567572 MTG1Q9BT17 334 aaPredicted RBP18.52■□□□□ 0.56
CMTM3-214ENST00000567572 DHRS4Q9BTZ2 278 aa18.52■□□□□ 0.56
CMTM3-214ENST00000567572 PITPNM3Q9BZ71 974 aa18.52■□□□□ 0.56
CMTM3-214ENST00000567572 CXCL16Q9H2A7 254 aa18.52■□□□□ 0.56
CMTM3-214ENST00000567572 METTL5Q9NRN9 209 aaKnown RBP18.52■□□□□ 0.56
CMTM3-214ENST00000567572 CYTH4Q9UIA0 394 aa18.52■□□□□ 0.56
CMTM3-214ENST00000567572 CASP8AP2Q9UKL3 1982 aa18.51■□□□□ 0.55
CMTM3-214ENST00000567572 MCF2LO15068 1137 aa18.51■□□□□ 0.55
CMTM3-214ENST00000567572 ZWINTO95229 277 aa18.51■□□□□ 0.55
CMTM3-214ENST00000567572 ETS1P14921 441 aa18.51■□□□□ 0.55
CMTM3-214ENST00000567572 ATP2A2P16615 1042 aaKnown RBP18.51■□□□□ 0.55
CMTM3-214ENST00000567572 IL1R2P27930 398 aa18.51■□□□□ 0.55
CMTM3-214ENST00000567572 STIP1P31948 543 aaKnown RBP18.51■□□□□ 0.55
CMTM3-214ENST00000567572 PRKCZQ05513 592 aa18.51■□□□□ 0.55
CMTM3-214ENST00000567572 INCA1Q0VD86 236 aa18.51■□□□□ 0.55
CMTM3-214ENST00000567572 FASTKD3Q14CZ7 662 aaKnown RBP18.51■□□□□ 0.55
CMTM3-214ENST00000567572 ZBTB6Q15916 424 aa18.51■□□□□ 0.55
CMTM3-214ENST00000567572 FAM133BQ5BKY9 247 aaKnown RBP18.51■□□□□ 0.55
CMTM3-214ENST00000567572 GNASQ5JWF2 1037 aa18.51■□□□□ 0.55
CMTM3-214ENST00000567572 TAF2Q6P1X5 1199 aa18.51■□□□□ 0.55
CMTM3-214ENST00000567572 ALKAL1Q6UXT8 129 aa18.51■□□□□ 0.55
CMTM3-214ENST00000567572 PAXIP1Q6ZW49 1069 aaPredicted RBP18.51■□□□□ 0.55
CMTM3-214ENST00000567572 VSIG1Q86XK7 387 aa18.51■□□□□ 0.55
CMTM3-214ENST00000567572 CPT1BQ92523 772 aa18.51■□□□□ 0.55
CMTM3-214ENST00000567572 ZMAT2Q96NC0 199 aaKnown RBP18.51■□□□□ 0.55
CMTM3-214ENST00000567572 FRMD8Q9BZ67 464 aaPredicted RBP18.51■□□□□ 0.55
CMTM3-214ENST00000567572 NXF3Q9H4D5 531 aaKnown RBP18.51■□□□□ 0.55
CMTM3-214ENST00000567572 ACSS3Q9H6R3 686 aa18.51■□□□□ 0.55
CMTM3-214ENST00000567572 CNTN3Q9P232 1028 aa18.51■□□□□ 0.55
CMTM3-214ENST00000567572 HMGXB4Q9UGU5 601 aa18.51■□□□□ 0.55
CMTM3-214ENST00000567572 TYROBPO43914 113 aa18.51■□□□□ 0.55
CMTM3-214ENST00000567572 SPAG6O75602 509 aa18.51■□□□□ 0.55
CMTM3-214ENST00000567572 ATP5HO75947 161 aa18.51■□□□□ 0.55
CMTM3-214ENST00000567572 CCNB1P14635 433 aa18.51■□□□□ 0.55
CMTM3-214ENST00000567572 YARSP54577 528 aaKnown RBP18.51■□□□□ 0.55
CMTM3-214ENST00000567572 TFDP2Q14188 446 aa18.51■□□□□ 0.55
CMTM3-214ENST00000567572 PREPLQ4J6C6 727 aaPredicted RBP18.51■□□□□ 0.55
CMTM3-214ENST00000567572 FAM47CQ5HY64 1035 aa18.51■□□□□ 0.55
CMTM3-214ENST00000567572 WLSQ5T9L3 541 aa18.51■□□□□ 0.55
CMTM3-214ENST00000567572 CGB2Q6NT52 195 aa18.51■□□□□ 0.55
CMTM3-214ENST00000567572 FBF1Q8TES7 1133 aa18.51■□□□□ 0.55
CMTM3-214ENST00000567572 PYROXD1Q8WU10 500 aa18.51■□□□□ 0.55
CMTM3-214ENST00000567572 HAUS1Q96CS2 278 aa18.51■□□□□ 0.55
CMTM3-214ENST00000567572 TWNKQ96RR1 684 aa18.51■□□□□ 0.55
CMTM3-214ENST00000567572 NCAPGQ9BPX3 1015 aa18.51■□□□□ 0.55
CMTM3-214ENST00000567572 ECT2Q9H8V3 914 aa18.51■□□□□ 0.55
CMTM3-214ENST00000567572 ZWILCHQ9H900 591 aa18.51■□□□□ 0.55
CMTM3-214ENST00000567572 PIN4Q9Y237 131 aaKnown RBP18.51■□□□□ 0.55
CMTM3-214ENST00000567572 HES2Q9Y543 173 aa18.51■□□□□ 0.55
CMTM3-214ENST00000567572 PDCD11Q14690 1871 aaKnown RBP18.5■□□□□ 0.55
CMTM3-214ENST00000567572 POC1B-GALNT4F8VUJ3 575 aa18.5■□□□□ 0.55
CMTM3-214ENST00000567572 SEPT4O43236 478 aa18.5■□□□□ 0.55
CMTM3-214ENST00000567572 ENDOD1O94919 500 aa18.5■□□□□ 0.55
CMTM3-214ENST00000567572 ATP6V1G2O95670 118 aa18.5■□□□□ 0.55
CMTM3-214ENST00000567572 ERBB2P04626 1255 aa18.5■□□□□ 0.55
CMTM3-214ENST00000567572 NQO1P15559 274 aaKnown RBP18.5■□□□□ 0.55
CMTM3-214ENST00000567572 ZNF143P52747 638 aaPredicted RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms