RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 KIAA0895Q8NCT3 520 aa15.91■□□□□ 0.14
RNF40-209ENST00000566703 SMARCD1Q96GM5 515 aa15.91■□□□□ 0.14
RNF40-209ENST00000566703 CNOT6LQ96LI5 555 aaKnown RBP15.91■□□□□ 0.14
RNF40-209ENST00000566703 KCNK16Q96T55 309 aa15.91■□□□□ 0.14
RNF40-209ENST00000566703 KCTD10Q9H3F6 313 aa15.91■□□□□ 0.14
RNF40-209ENST00000566703 SMYD3Q9H7B4 428 aa15.91■□□□□ 0.14
RNF40-209ENST00000566703 EXOC1Q9NV70 894 aa15.91■□□□□ 0.14
RNF40-209ENST00000566703 SMPD4Q9NXE4 827 aa15.91■□□□□ 0.14
RNF40-209ENST00000566703 CFAP97Q9P2B7 532 aa15.91■□□□□ 0.14
RNF40-209ENST00000566703 CHORDC1Q9UHD1 332 aaPredicted RBP15.91■□□□□ 0.14
RNF40-209ENST00000566703 BCLAF3A2AJT9 711 aaKnown RBP15.9■□□□□ 0.14
RNF40-209ENST00000566703 COCHO43405 550 aa15.9■□□□□ 0.14
RNF40-209ENST00000566703 ALDH1A2O94788 518 aa15.9■□□□□ 0.14
RNF40-209ENST00000566703 VNN1O95497 513 aa15.9■□□□□ 0.14
RNF40-209ENST00000566703 APODP05090 189 aa15.9■□□□□ 0.14
RNF40-209ENST00000566703 ZDHHC11BP0C7U3 371 aa15.9■□□□□ 0.14
RNF40-209ENST00000566703 CMA1P23946 247 aa15.9■□□□□ 0.14
RNF40-209ENST00000566703 GRIA2P42262 883 aa15.9■□□□□ 0.14
RNF40-209ENST00000566703 DNM1Q05193 864 aaKnown RBP15.9■□□□□ 0.14
RNF40-209ENST00000566703 GAD2Q05329 585 aa15.9■□□□□ 0.14
RNF40-209ENST00000566703 KMT5BQ4FZB7 885 aa15.9■□□□□ 0.14
RNF40-209ENST00000566703 C2orf27AQ580R0 203 aa15.9■□□□□ 0.14
RNF40-209ENST00000566703 STPG1Q5TH74 334 aa15.9■□□□□ 0.14
RNF40-209ENST00000566703 FUKQ8N0W3 1084 aa15.9■□□□□ 0.14
RNF40-209ENST00000566703 KCNV2Q8TDN2 545 aa15.9■□□□□ 0.14
RNF40-209ENST00000566703 CNTNAP3BQ96NU0 1288 aa15.9■□□□□ 0.14
RNF40-209ENST00000566703 MED10Q9BTT4 135 aa15.9■□□□□ 0.14
RNF40-209ENST00000566703 CNTNAP3Q9BZ76 1288 aa15.9■□□□□ 0.14
RNF40-209ENST00000566703 CSNK1G1Q9HCP0 422 aa15.9■□□□□ 0.14
RNF40-209ENST00000566703 DMXL1Q9Y485 3027 aa15.89■□□□□ 0.13
RNF40-209ENST00000566703 RALGAPA1Q6GYQ0 2036 aa15.89■□□□□ 0.13
RNF40-209ENST00000566703 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.89■□□□□ 0.13
RNF40-209ENST00000566703 MAPK13O15264 365 aa15.89■□□□□ 0.13
RNF40-209ENST00000566703 KIF20AO95235 890 aa15.89■□□□□ 0.13
RNF40-209ENST00000566703 KAT7O95251 611 aa15.89■□□□□ 0.13
RNF40-209ENST00000566703 CAVIN2O95810 425 aa15.89■□□□□ 0.13
RNF40-209ENST00000566703 ADH5P11766 374 aa15.89■□□□□ 0.13
RNF40-209ENST00000566703 TRIM21P19474 475 aaKnown RBP15.89■□□□□ 0.13
RNF40-209ENST00000566703 SLC6A11P48066 632 aa15.89■□□□□ 0.13
RNF40-209ENST00000566703 SLC5A3P53794 718 aa15.89■□□□□ 0.13
RNF40-209ENST00000566703 IFRD2Q12894 506 aaPredicted RBP15.89■□□□□ 0.13
RNF40-209ENST00000566703 CCDC6Q16204 474 aa15.89■□□□□ 0.13
RNF40-209ENST00000566703 EOGTQ5NDL2 527 aa15.89■□□□□ 0.13
RNF40-209ENST00000566703 SV2AQ7L0J3 742 aa15.89■□□□□ 0.13
RNF40-209ENST00000566703 GRAMD1CQ8IYS0 662 aa15.89■□□□□ 0.13
RNF40-209ENST00000566703 SCAMP5Q8TAC9 235 aa15.89■□□□□ 0.13
RNF40-209ENST00000566703 SDCBP2Q9H190 292 aa15.89■□□□□ 0.13
RNF40-209ENST00000566703 FBXO44Q9H4M3 255 aa15.89■□□□□ 0.13
RNF40-209ENST00000566703 RXFP3Q9NSD7 469 aa15.89■□□□□ 0.13
RNF40-209ENST00000566703 TRAF3IP3Q9Y228 551 aa15.89■□□□□ 0.13
RNF40-209ENST00000566703 FRMD4BQ9Y2L6 1034 aa15.89■□□□□ 0.13
RNF40-209ENST00000566703 PTPRDP23468 1912 aa15.88■□□□□ 0.13
RNF40-209ENST00000566703 DCLK1O15075 740 aa15.88■□□□□ 0.13
RNF40-209ENST00000566703 HOXC11O43248 304 aaPredicted RBP15.88■□□□□ 0.13
RNF40-209ENST00000566703 AP1G2O75843 785 aa15.88■□□□□ 0.13
RNF40-209ENST00000566703 ASS1P00966 412 aaKnown RBP15.88■□□□□ 0.13
RNF40-209ENST00000566703 NR3C1P04150 777 aa15.88■□□□□ 0.13
RNF40-209ENST00000566703 GBP1P32455 592 aa15.88■□□□□ 0.13
RNF40-209ENST00000566703 KIR2DL1P43626 348 aaPredicted RBP15.88■□□□□ 0.13
RNF40-209ENST00000566703 SEC13P55735 322 aa15.88■□□□□ 0.13
RNF40-209ENST00000566703 CREB5Q02930 508 aa15.88■□□□□ 0.13
RNF40-209ENST00000566703 ENPEPQ07075 957 aa15.88■□□□□ 0.13
RNF40-209ENST00000566703 NFIL3Q16649 462 aa15.88■□□□□ 0.13
RNF40-209ENST00000566703 LY6G5CQ5SRR4 150 aa15.88■□□□□ 0.13
RNF40-209ENST00000566703 PMS2CLQ68D20 193 aa15.88■□□□□ 0.13
RNF40-209ENST00000566703 NUDT18Q6ZVK8 323 aa15.88■□□□□ 0.13
RNF40-209ENST00000566703 ACOT1Q86TX2 421 aa15.88■□□□□ 0.13
RNF40-209ENST00000566703 CCDC33Q8N5R6 958 aa15.88■□□□□ 0.13
RNF40-209ENST00000566703 IL17RCQ8NAC3 791 aa15.88■□□□□ 0.13
RNF40-209ENST00000566703 ZFRQ96KR1 1074 aaKnown RBP15.88■□□□□ 0.13
RNF40-209ENST00000566703 LSM14BQ9BX40 385 aaKnown RBP15.88■□□□□ 0.13
RNF40-209ENST00000566703 POLMQ9NP87 494 aaPredicted RBP15.88■□□□□ 0.13
RNF40-209ENST00000566703 ARHGEF4Q9NR80 690 aa15.88■□□□□ 0.13
RNF40-209ENST00000566703 HPSEQ9Y251 543 aa15.88■□□□□ 0.13
RNF40-209ENST00000566703 SH3BP1Q9Y3L3 701 aa15.88■□□□□ 0.13
RNF40-209ENST00000566703 ATG2BQ96BY7 2078 aa15.88■□□□□ 0.13
RNF40-209ENST00000566703 CALUO43852 315 aaPredicted RBP15.87■□□□□ 0.13
RNF40-209ENST00000566703 CHRM1P11229 460 aaPredicted RBP15.87■□□□□ 0.13
RNF40-209ENST00000566703 NDST1P52848 882 aa15.87■□□□□ 0.13
RNF40-209ENST00000566703 DLG4P78352 724 aa15.87■□□□□ 0.13
RNF40-209ENST00000566703 BYSLQ13895 437 aaKnown RBP15.87■□□□□ 0.13
RNF40-209ENST00000566703 BTBD8Q5XKL5 378 aa15.87■□□□□ 0.13
RNF40-209ENST00000566703 RNF43Q68DV7 783 aa15.87■□□□□ 0.13
RNF40-209ENST00000566703 ANO7Q6IWH7 933 aa15.87■□□□□ 0.13
RNF40-209ENST00000566703 TMEM92Q6UXU6 159 aa15.87■□□□□ 0.13
RNF40-209ENST00000566703 HTR3DQ70Z44 454 aa15.87■□□□□ 0.13
RNF40-209ENST00000566703 ETFBKMTQ8IXQ9 262 aa15.87■□□□□ 0.13
RNF40-209ENST00000566703 ZMIZ2Q8NF64 920 aa15.87■□□□□ 0.13
RNF40-209ENST00000566703 OLIG1Q8TAK6 271 aa15.87■□□□□ 0.13
RNF40-209ENST00000566703 CCDC47Q96A33 483 aaKnown RBP15.87■□□□□ 0.13
RNF40-209ENST00000566703 SMOQ99835 787 aa15.87■□□□□ 0.13
RNF40-209ENST00000566703 CYP3A43Q9HB55 503 aa15.87■□□□□ 0.13
RNF40-209ENST00000566703 TLR8Q9NR97 1041 aaKnown RBP15.87■□□□□ 0.13
RNF40-209ENST00000566703 FAM237AA0A1B0GTK4 181 aa15.86■□□□□ 0.13
RNF40-209ENST00000566703 A0A1B0GVL5 298 aa15.86■□□□□ 0.13
RNF40-209ENST00000566703 CLSTN1O94985 981 aa15.86■□□□□ 0.13
RNF40-209ENST00000566703 KLF8O95600 359 aaPredicted RBP15.86■□□□□ 0.13
RNF40-209ENST00000566703 PFKFB1P16118 471 aa15.86■□□□□ 0.13
RNF40-209ENST00000566703 VAMP7P51809 220 aa15.86■□□□□ 0.13
RNF40-209ENST00000566703 PKP1Q13835 747 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms