RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 LONRF2Q1L5Z9 754 aa18.54■□□□□ 0.56
HERC2-208ENST00000566635 SMTNL2Q2TAL5 461 aa18.54■□□□□ 0.56
HERC2-208ENST00000566635 ANKS3Q6ZW76 656 aa18.54■□□□□ 0.56
HERC2-208ENST00000566635 KATNAL2Q8IYT4 538 aa18.54■□□□□ 0.56
HERC2-208ENST00000566635 TTC9BQ8N6N2 239 aa18.54■□□□□ 0.56
HERC2-208ENST00000566635 STKLD1Q8NE28 680 aa18.54■□□□□ 0.56
HERC2-208ENST00000566635 ADAM33Q9BZ11 813 aa18.54■□□□□ 0.56
HERC2-208ENST00000566635 ZWILCHQ9H900 591 aa18.54■□□□□ 0.56
HERC2-208ENST00000566635 ASNSD1Q9NWL6 643 aa18.54■□□□□ 0.56
HERC2-208ENST00000566635 MYO16Q9Y6X6 1858 aa18.54■□□□□ 0.56
HERC2-208ENST00000566635 RPL17P18621 184 aaKnown RBP18.53■□□□□ 0.56
HERC2-208ENST00000566635 LAG3P18627 525 aa18.53■□□□□ 0.56
HERC2-208ENST00000566635 MIPP30301 263 aa18.53■□□□□ 0.56
HERC2-208ENST00000566635 GPR15P49685 360 aa18.53■□□□□ 0.56
HERC2-208ENST00000566635 USP41Q3LFD5 358 aa18.53■□□□□ 0.56
HERC2-208ENST00000566635 EFHC1Q5JVL4 640 aa18.53■□□□□ 0.56
HERC2-208ENST00000566635 PSRC1Q6PGN9 363 aaPredicted RBP18.53■□□□□ 0.56
HERC2-208ENST00000566635 ANKS1BQ7Z6G8 1248 aa18.53■□□□□ 0.56
HERC2-208ENST00000566635 SCN4BQ8IWT1 228 aa18.53■□□□□ 0.56
HERC2-208ENST00000566635 ATAD1Q8NBU5 361 aa18.53■□□□□ 0.56
HERC2-208ENST00000566635 FAM172AQ8WUF8 416 aa18.53■□□□□ 0.56
HERC2-208ENST00000566635 RIN2Q8WYP3 895 aaPredicted RBP18.53■□□□□ 0.56
HERC2-208ENST00000566635 PEBP4Q96S96 227 aa18.53■□□□□ 0.56
HERC2-208ENST00000566635 HERPUD2Q9BSE4 406 aa18.53■□□□□ 0.56
HERC2-208ENST00000566635 UBXN6Q9BZV1 441 aa18.53■□□□□ 0.56
HERC2-208ENST00000566635 NGRNQ9NPE2 291 aaKnown RBP18.53■□□□□ 0.56
HERC2-208ENST00000566635 PCSK1NQ9UHG2 260 aa18.53■□□□□ 0.56
HERC2-208ENST00000566635 CDY1Q9Y6F8 540 aa18.53■□□□□ 0.56
HERC2-208ENST00000566635 YJEFN3A6XGL0 299 aa18.53■□□□□ 0.56
HERC2-208ENST00000566635 E7ENQ6 273 aa18.53■□□□□ 0.56
HERC2-208ENST00000566635 PI4K2BG5E9Z4 385 aa18.53■□□□□ 0.56
HERC2-208ENST00000566635 C2CD2LO14523 706 aa18.53■□□□□ 0.56
HERC2-208ENST00000566635 ADAM12O43184 909 aa18.53■□□□□ 0.56
HERC2-208ENST00000566635 HSF2BPO75031 334 aa18.53■□□□□ 0.56
HERC2-208ENST00000566635 DAB1O75553 588 aa18.53■□□□□ 0.56
HERC2-208ENST00000566635 VNN2O95498 520 aa18.53■□□□□ 0.56
HERC2-208ENST00000566635 KRT1P04264 644 aa18.53■□□□□ 0.56
HERC2-208ENST00000566635 RHOXF2BP0C7M4 288 aa18.53■□□□□ 0.56
HERC2-208ENST00000566635 ITIH3Q06033 890 aa18.53■□□□□ 0.56
HERC2-208ENST00000566635 SDHAF4Q5VUM1 108 aa18.53■□□□□ 0.56
HERC2-208ENST00000566635 BHLHA9Q7RTU4 235 aa18.53■□□□□ 0.56
HERC2-208ENST00000566635 DEFB106AQ8N104 65 aa18.53■□□□□ 0.56
HERC2-208ENST00000566635 SCAMP5Q8TAC9 235 aa18.53■□□□□ 0.56
HERC2-208ENST00000566635 TMEM169Q96HH4 297 aa18.53■□□□□ 0.56
HERC2-208ENST00000566635 RHOXF2Q9BQY4 288 aa18.53■□□□□ 0.56
HERC2-208ENST00000566635 CNGB3Q9NQW8 809 aa18.53■□□□□ 0.56
HERC2-208ENST00000566635 NR2E1Q9Y466 385 aa18.53■□□□□ 0.56
HERC2-208ENST00000566635 PCDHB5Q9Y5E4 795 aa18.53■□□□□ 0.56
HERC2-208ENST00000566635 TCRBV7S2A1N4TA0A589 114 aa18.52■□□□□ 0.56
HERC2-208ENST00000566635 H7C4K7 107 aa18.52■□□□□ 0.56
HERC2-208ENST00000566635 RNF8O76064 485 aa18.52■□□□□ 0.56
HERC2-208ENST00000566635 FBXO21O94952 628 aa18.52■□□□□ 0.56
HERC2-208ENST00000566635 MRPS25P82663 173 aaKnown RBP18.52■□□□□ 0.56
HERC2-208ENST00000566635 IFRD2Q12894 506 aaPredicted RBP18.52■□□□□ 0.56
HERC2-208ENST00000566635 PSMD5Q16401 504 aa18.52■□□□□ 0.56
HERC2-208ENST00000566635 KCNT1Q5JUK3 1230 aa18.52■□□□□ 0.56
HERC2-208ENST00000566635 ZFYVE27Q5T4F4 411 aa18.52■□□□□ 0.56
HERC2-208ENST00000566635 LRRC38Q5VT99 294 aa18.52■□□□□ 0.56
HERC2-208ENST00000566635 RNF19BQ6ZMZ0 732 aa18.52■□□□□ 0.56
HERC2-208ENST00000566635 CCDC50Q8IVM0 306 aa18.52■□□□□ 0.56
HERC2-208ENST00000566635 FUBP3Q96I24 572 aaKnown RBP eCLIP18.52■□□□□ 0.56
HERC2-208ENST00000566635 CRISPLD1Q9H336 500 aa18.52■□□□□ 0.56
HERC2-208ENST00000566635 CHST7Q9NS84 486 aa18.52■□□□□ 0.56
HERC2-208ENST00000566635 MTMR11A4FU01 709 aa18.52■□□□□ 0.55
HERC2-208ENST00000566635 KRIT1O00522 736 aa18.52■□□□□ 0.55
HERC2-208ENST00000566635 SOAT2O75908 522 aa18.52■□□□□ 0.55
HERC2-208ENST00000566635 ZBED1O96006 694 aa18.52■□□□□ 0.55
HERC2-208ENST00000566635 SOD2P04179 222 aa18.52■□□□□ 0.55
HERC2-208ENST00000566635 SLC5A3P53794 718 aa18.52■□□□□ 0.55
HERC2-208ENST00000566635 HTRA4P83105 476 aaPredicted RBP18.52■□□□□ 0.55
HERC2-208ENST00000566635 ACAP1Q15027 740 aa18.52■□□□□ 0.55
HERC2-208ENST00000566635 ARCQ7LC44 396 aa18.52■□□□□ 0.55
HERC2-208ENST00000566635 ZDHHC14Q8IZN3 488 aa18.52■□□□□ 0.55
HERC2-208ENST00000566635 RNF25Q96BH1 459 aaPredicted RBP18.52■□□□□ 0.55
HERC2-208ENST00000566635 C11orf84Q9BUA3 381 aaPredicted RBP18.52■□□□□ 0.55
HERC2-208ENST00000566635 PNPLA8Q9NP80 782 aa18.52■□□□□ 0.55
HERC2-208ENST00000566635 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.52■□□□□ 0.55
HERC2-208ENST00000566635 MTRRQ9UBK8 725 aa18.52■□□□□ 0.55
HERC2-208ENST00000566635 PTPN9P43378 593 aa18.51■□□□□ 0.55
HERC2-208ENST00000566635 ATXN1P54253 815 aaKnown RBP18.51■□□□□ 0.55
HERC2-208ENST00000566635 YWHAZP63104 245 aaKnown RBP18.51■□□□□ 0.55
HERC2-208ENST00000566635 PITX1P78337 314 aaPredicted RBP18.51■□□□□ 0.55
HERC2-208ENST00000566635 GPR17Q13304 367 aa18.51■□□□□ 0.55
HERC2-208ENST00000566635 DDR2Q16832 855 aa18.51■□□□□ 0.55
HERC2-208ENST00000566635 CYP4V2Q6ZWL3 525 aaPredicted RBP18.51■□□□□ 0.55
HERC2-208ENST00000566635 POLNQ7Z5Q5 900 aa18.51■□□□□ 0.55
HERC2-208ENST00000566635 SLC13A5Q86YT5 568 aaPredicted RBP18.51■□□□□ 0.55
HERC2-208ENST00000566635 MMGT1Q8N4V1 131 aa18.51■□□□□ 0.55
HERC2-208ENST00000566635 FBXO22Q8NEZ5 403 aa18.51■□□□□ 0.55
HERC2-208ENST00000566635 EXD1Q8NHP7 514 aa18.51■□□□□ 0.55
HERC2-208ENST00000566635 RAPGEF5Q92565 580 aa18.51■□□□□ 0.55
HERC2-208ENST00000566635 TBCBQ99426 244 aa18.51■□□□□ 0.55
HERC2-208ENST00000566635 ZBED2Q9BTP6 218 aa18.51■□□□□ 0.55
HERC2-208ENST00000566635 DDX23Q9BUQ8 820 aaKnown RBP18.51■□□□□ 0.55
HERC2-208ENST00000566635 ANKZF1Q9H8Y5 726 aa18.51■□□□□ 0.55
HERC2-208ENST00000566635 SPG21Q9NZD8 308 aa18.51■□□□□ 0.55
HERC2-208ENST00000566635 CALCOCO1Q9P1Z2 691 aa18.51■□□□□ 0.55
HERC2-208ENST00000566635 USP18Q9UMW8 372 aa18.51■□□□□ 0.55
HERC2-208ENST00000566635 TNFRSF10BO14763 440 aa18.5■□□□□ 0.55
HERC2-208ENST00000566635 TRUB2O95900 331 aaKnown RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms