RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 WDR92Q96MX6 357 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 PPP1R9BQ96SB3 815 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 RBM15Q96T37 977 aaKnown RBP eCLIP3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 MYOCQ99972 504 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 BTBD2Q9BX70 525 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 TWSG1Q9GZX9 223 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 TTYH1Q9H313 450 aaPredicted RBP3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 VEZTQ9HBM0 779 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 G6PC2Q9NQR9 355 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 SAE1Q9UBE0 346 aaPredicted RBP3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 SEL1LQ9UBV2 794 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 RASAL2Q9UJF2 1139 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 NAALADL1Q9UQQ1 740 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 DTNAQ9Y4J8 743 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 ADAMTS20P59510 1910 aa3.65□□□□□ -1.83
HERPUD1-211ENST00000566550 PNMA6EA0A0J9YXQ4 647 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 LOC102723971A0A1B0GUV8 181 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 TCRBV7S2A1N4TA0A589 114 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 GOLGA6L6A8MZA4 724 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 KIF28PB7ZC32 967 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 F8W031 263 aaPredicted RBP3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 WNT10BO00744 389 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 SUV39H1O43463 412 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 ITGA10O75578 1167 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 PIAS2O75928 621 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 DNAJB5O75953 348 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 RASAL1O95294 804 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 SLU7O95391 586 aaKnown RBP3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 BAG2O95816 211 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 F9P00740 461 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 VIPP01282 170 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 LMNAP02545 664 aaKnown RBP3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 LRG1P02750 347 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 CLEC3BP05452 202 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 ANXA6P08133 673 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 SPARCP09486 303 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 GAAP10253 952 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 PSMC2P35998 433 aaKnown RBP3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 PPARGP37231 505 aaPredicted RBP3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 STAT5BP51692 787 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 RARSP54136 660 aaKnown RBP3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 MLLT6P55198 1093 aaPredicted RBP3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 MXRA7P84157 204 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 UBXN1Q04323 297 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 CHRNEQ04844 493 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 NEXNQ0ZGT2 675 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 AP1B1Q10567 949 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 ARHGEF7Q14155 803 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 PUM1Q14671 1186 aaKnown RBP eCLIP3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 TBCCQ15814 346 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 P3H1Q32P28 736 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 WDR72Q3MJ13 1102 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 CRB2Q5IJ48 1285 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 TTC22Q5TAA0 569 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 KAZNQ674X7 775 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 GRAMD4Q6IC98 578 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 MFSD5Q6N075 450 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 TEPPQ6URK8 271 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 LRRC8DQ7L1W4 858 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 ANKS1BQ7Z6G8 1248 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 ZDHHC14Q8IZN3 488 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 ADSSL1Q8N142 457 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 OR8H3Q8N146 312 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 NUP93Q8N1F7 819 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 ANKRD44Q8N8A2 993 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 NAT8LQ8N9F0 302 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 FAM46DQ8NEK8 389 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 LINS1Q8NG48 757 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 ZNF384Q8TF68 577 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 HMGB4Q8WW32 186 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 RUFY2Q8WXA3 655 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 SDCCAG3Q96C92 435 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 INTS4Q96HW7 963 aaKnown RBP3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 MED15Q96RN5 788 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 TSPAN18Q96SJ8 248 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 MAK16Q9BXY0 300 aaKnown RBP3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 SLC25A32Q9H2D1 315 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 CXorf56Q9H5V9 222 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 UNKLQ9H9P5 680 aaKnown RBP3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 XAB2Q9HCS7 855 aaKnown RBP3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 ZSCAN32Q9NX65 697 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 SIDT1Q9NXL6 827 aaKnown RBP3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 GPRC5DQ9NZD1 345 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 NDUFAF4Q9P032 175 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 CFAP97Q9P2B7 532 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 ARHGAP20Q9P2F6 1191 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 XPR1Q9UBH6 696 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 CDC42EP3Q9UKI2 254 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 CORO1CQ9ULV4 474 aaPredicted RBP3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 SLC45A2Q9UMX9 530 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 HPSEQ9Y251 543 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 YBX2Q9Y2T7 364 aaKnown RBP3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 USP15Q9Y4E8 981 aaPredicted RBP3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 PLEKHM1Q9Y4G2 1056 aa3.64□□□□□ -1.83
HERPUD1-211ENST00000566550 SPATA31D1Q6ZQQ2 1576 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 OR14I1A6ND48 311 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 AGAP14A8MT82 685 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 TSPAN4O14817 238 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 KCNQ3O43525 872 aa3.63□□□□□ -1.83
HERPUD1-211ENST00000566550 RGS10O43665 173 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms