RNA–Protein interactions for RNA: ENST00000566498.1

CCDC113-204, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-204ENST00000566498 PPM1KQ8N3J5 372 aa20.41■□□□□ 0.86
CCDC113-204ENST00000566498 EHBP1Q8NDI1 1231 aa20.41■□□□□ 0.86
CCDC113-204ENST00000566498 OSCP1Q8WVF1 389 aa20.41■□□□□ 0.86
CCDC113-204ENST00000566498 LINC00597Q9H2U6 94 aa20.41■□□□□ 0.86
CCDC113-204ENST00000566498 HPS4Q9NQG7 708 aa20.41■□□□□ 0.86
CCDC113-204ENST00000566498 TLR8Q9NR97 1041 aaKnown RBP20.41■□□□□ 0.86
CCDC113-204ENST00000566498 CPQQ9Y646 472 aa20.41■□□□□ 0.86
CCDC113-204ENST00000566498 WNT6Q9Y6F9 365 aa20.41■□□□□ 0.86
CCDC113-204ENST00000566498 KIF26AQ9ULI4 1882 aaPredicted RBP20.41■□□□□ 0.86
CCDC113-204ENST00000566498 OAS1P00973 400 aaKnown RBP20.4■□□□□ 0.86
CCDC113-204ENST00000566498 CD19P15391 556 aa20.4■□□□□ 0.86
CCDC113-204ENST00000566498 ZXDBP98169 803 aa20.4■□□□□ 0.86
CCDC113-204ENST00000566498 NR1H3Q13133 447 aa20.4■□□□□ 0.86
CCDC113-204ENST00000566498 TXNDC11Q6PKC3 985 aa20.4■□□□□ 0.86
CCDC113-204ENST00000566498 CPA6Q8N4T0 437 aa20.4■□□□□ 0.86
CCDC113-204ENST00000566498 CCSER2Q9H7U1 834 aa20.4■□□□□ 0.86
CCDC113-204ENST00000566498 PCDHB4Q9Y5E5 795 aa20.4■□□□□ 0.86
CCDC113-204ENST00000566498 OTOL1A6NHN0 477 aaPredicted RBP20.39■□□□□ 0.85
CCDC113-204ENST00000566498 HHLA1C9JL84 531 aa20.39■□□□□ 0.85
CCDC113-204ENST00000566498 COCHO43405 550 aa20.39■□□□□ 0.85
CCDC113-204ENST00000566498 CHRNB1P11230 501 aa20.39■□□□□ 0.85
CCDC113-204ENST00000566498 SGO2Q562F6 1265 aa20.39■□□□□ 0.85
CCDC113-204ENST00000566498 SNX30Q5VWJ9 437 aa20.39■□□□□ 0.85
CCDC113-204ENST00000566498 RRAGAQ7L523 313 aa20.39■□□□□ 0.85
CCDC113-204ENST00000566498 GPRIN1Q7Z2K8 1008 aa20.39■□□□□ 0.85
CCDC113-204ENST00000566498 ZNF687Q8N1G0 1237 aa20.39■□□□□ 0.85
CCDC113-204ENST00000566498 ATP2A3Q93084 1043 aa20.39■□□□□ 0.85
CCDC113-204ENST00000566498 ECT2Q9H8V3 914 aa20.39■□□□□ 0.85
CCDC113-204ENST00000566498 PNPLA8Q9NP80 782 aa20.39■□□□□ 0.85
CCDC113-204ENST00000566498 CFAP97Q9P2B7 532 aa20.39■□□□□ 0.85
CCDC113-204ENST00000566498 DACH1Q9UI36 760 aa20.39■□□□□ 0.85
CCDC113-204ENST00000566498 KIAA1257Q9ULG3 409 aa20.39■□□□□ 0.85
CCDC113-204ENST00000566498 SCML2Q9UQR0 700 aa20.39■□□□□ 0.85
CCDC113-204ENST00000566498 COL4A2P08572 1712 aa20.39■□□□□ 0.85
CCDC113-204ENST00000566498 F5P12259 2224 aa20.38■□□□□ 0.85
CCDC113-204ENST00000566498 FAM92AA1XBS5 289 aa20.38■□□□□ 0.85
CCDC113-204ENST00000566498 ZDHHC11BP0C7U3 371 aa20.38■□□□□ 0.85
CCDC113-204ENST00000566498 TCF3P15923 654 aa20.38■□□□□ 0.85
CCDC113-204ENST00000566498 MRE11P49959 708 aa20.38■□□□□ 0.85
CCDC113-204ENST00000566498 CSTF1Q05048 431 aaKnown RBP20.38■□□□□ 0.85
CCDC113-204ENST00000566498 USP4Q13107 963 aa20.38■□□□□ 0.85
CCDC113-204ENST00000566498 MTAPQ13126 283 aa20.38■□□□□ 0.85
CCDC113-204ENST00000566498 LRRC32Q14392 662 aa20.38■□□□□ 0.85
CCDC113-204ENST00000566498 DPCR1Q3MIW9 517 aa20.38■□□□□ 0.85
CCDC113-204ENST00000566498 ARHGAP17Q68EM7 881 aa20.38■□□□□ 0.85
CCDC113-204ENST00000566498 TMEM270Q6UE05 265 aa20.38■□□□□ 0.85
CCDC113-204ENST00000566498 ANKRD52Q8NB46 1076 aa20.38■□□□□ 0.85
CCDC113-204ENST00000566498 LMO3Q8TAP4 145 aa20.38■□□□□ 0.85
CCDC113-204ENST00000566498 CNOT6LQ96LI5 555 aaKnown RBP20.38■□□□□ 0.85
CCDC113-204ENST00000566498 MED15Q96RN5 788 aa20.38■□□□□ 0.85
CCDC113-204ENST00000566498 HESX1Q9UBX0 185 aa20.38■□□□□ 0.85
CCDC113-204ENST00000566498 SLC9A3R1O14745 358 aaPredicted RBP20.37■□□□□ 0.85
CCDC113-204ENST00000566498 SCAMP3O14828 347 aaKnown RBP20.37■□□□□ 0.85
CCDC113-204ENST00000566498 CYP26A1O43174 497 aa20.37■□□□□ 0.85
CCDC113-204ENST00000566498 OLFM2O95897 454 aa20.37■□□□□ 0.85
CCDC113-204ENST00000566498 SP9P0CG40 484 aa20.37■□□□□ 0.85
CCDC113-204ENST00000566498 VDRP11473 427 aa20.37■□□□□ 0.85
CCDC113-204ENST00000566498 MTIF2P46199 727 aaKnown RBP20.37■□□□□ 0.85
CCDC113-204ENST00000566498 PGFP49763 221 aa20.37■□□□□ 0.85
CCDC113-204ENST00000566498 TUBP50607 506 aa20.37■□□□□ 0.85
CCDC113-204ENST00000566498 KIF11P52732 1056 aa20.37■□□□□ 0.85
CCDC113-204ENST00000566498 GOLGA7BQ2TAP0 167 aa20.37■□□□□ 0.85
CCDC113-204ENST00000566498 EML3Q32P44 896 aa20.37■□□□□ 0.85
CCDC113-204ENST00000566498 DGKKQ5KSL6 1271 aa20.37■□□□□ 0.85
CCDC113-204ENST00000566498 DDX42Q86XP3 938 aaKnown RBP eCLIP20.37■□□□□ 0.85
CCDC113-204ENST00000566498 EXOC4Q96A65 974 aa20.37■□□□□ 0.85
CCDC113-204ENST00000566498 UBXN6Q9BZV1 441 aa20.37■□□□□ 0.85
CCDC113-204ENST00000566498 INTS2Q9H0H0 1204 aaKnown RBP20.37■□□□□ 0.85
CCDC113-204ENST00000566498 RBM12Q9NTZ6 932 aaKnown RBP20.37■□□□□ 0.85
CCDC113-204ENST00000566498 TLR5O60602 858 aa20.36■□□□□ 0.85
CCDC113-204ENST00000566498 NFATC1O95644 943 aa20.36■□□□□ 0.85
CCDC113-204ENST00000566498 GJA4P35212 333 aa20.36■□□□□ 0.85
CCDC113-204ENST00000566498 ATP5C1P36542 298 aaKnown RBP20.36■□□□□ 0.85
CCDC113-204ENST00000566498 GALK1P51570 392 aa20.36■□□□□ 0.85
CCDC113-204ENST00000566498 GRSF1Q12849 480 aaKnown RBP eCLIP20.36■□□□□ 0.85
CCDC113-204ENST00000566498 ARHGEF19Q8IW93 802 aa20.36■□□□□ 0.85
CCDC113-204ENST00000566498 UBA3Q8TBC4 463 aa20.36■□□□□ 0.85
CCDC113-204ENST00000566498 GPT2Q8TD30 523 aa20.36■□□□□ 0.85
CCDC113-204ENST00000566498 KAT5Q92993 513 aa20.36■□□□□ 0.85
CCDC113-204ENST00000566498 CRACR2AQ9BSW2 395 aa20.36■□□□□ 0.85
CCDC113-204ENST00000566498 CHRDQ9H2X0 955 aa20.36■□□□□ 0.85
CCDC113-204ENST00000566498 UBE2TQ9NPD8 197 aaPredicted RBP20.36■□□□□ 0.85
CCDC113-204ENST00000566498 NAGPAQ9UK23 515 aa20.36■□□□□ 0.85
CCDC113-204ENST00000566498 TSPAN16Q9UKR8 245 aa20.36■□□□□ 0.85
CCDC113-204ENST00000566498 SH3BP1Q9Y3L3 701 aa20.36■□□□□ 0.85
CCDC113-204ENST00000566498 CACNA1IQ9P0X4 2223 aa20.35■□□□□ 0.85
CCDC113-204ENST00000566498 HELZP42694 1942 aaKnown RBP20.35■□□□□ 0.85
CCDC113-204ENST00000566498 A0A1W2PQH9 124 aa20.35■□□□□ 0.85
CCDC113-204ENST00000566498 TBX18O95935 607 aa20.35■□□□□ 0.85
CCDC113-204ENST00000566498 PAEPP09466 180 aa20.35■□□□□ 0.85
CCDC113-204ENST00000566498 ERCC5P28715 1186 aaPredicted RBP20.35■□□□□ 0.85
CCDC113-204ENST00000566498 NBL1P41271 181 aa20.35■□□□□ 0.85
CCDC113-204ENST00000566498 PIGZQ86VD9 579 aa20.35■□□□□ 0.85
CCDC113-204ENST00000566498 IRF2BP1Q8IU81 584 aa20.35■□□□□ 0.85
CCDC113-204ENST00000566498 FAM114A1Q8IWE2 563 aa20.35■□□□□ 0.85
CCDC113-204ENST00000566498 MAML2Q8IZL2 1156 aaPredicted RBP20.35■□□□□ 0.85
CCDC113-204ENST00000566498 ADGRG2Q8IZP9 1017 aa20.35■□□□□ 0.85
CCDC113-204ENST00000566498 UBR7Q8N806 425 aa20.35■□□□□ 0.85
CCDC113-204ENST00000566498 THAP9Q9H5L6 903 aa20.35■□□□□ 0.85
CCDC113-204ENST00000566498 FBXO4Q9UKT5 387 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms