RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 SPAG17Q6Q759 2223 aa12.68□□□□□ -0.38
UBR1-206ENST00000566493 KIAA1549LQ6ZVL6 1849 aa12.67□□□□□ -0.38
UBR1-206ENST00000566493 EML5Q05BV3 1969 aa12.67□□□□□ -0.38
UBR1-206ENST00000566493 LRRIQ3A6PVS8 624 aaPredicted RBP12.67□□□□□ -0.38
UBR1-206ENST00000566493 KIF20AO95235 890 aa12.67□□□□□ -0.38
UBR1-206ENST00000566493 OLFM2O95897 454 aa12.67□□□□□ -0.38
UBR1-206ENST00000566493 ADH1CP00326 375 aa12.67□□□□□ -0.38
UBR1-206ENST00000566493 C4BPAP04003 597 aaKnown RBP12.67□□□□□ -0.38
UBR1-206ENST00000566493 RPN1P04843 607 aaKnown RBP12.67□□□□□ -0.38
UBR1-206ENST00000566493 CYP17A1P05093 508 aa12.67□□□□□ -0.38
UBR1-206ENST00000566493 OPRD1P41143 372 aa12.67□□□□□ -0.38
UBR1-206ENST00000566493 CLDN10P78369 228 aa12.67□□□□□ -0.38
UBR1-206ENST00000566493 ZXDBP98169 803 aa12.67□□□□□ -0.38
UBR1-206ENST00000566493 STK4Q13043 487 aa12.67□□□□□ -0.38
UBR1-206ENST00000566493 DHCR24Q15392 516 aa12.67□□□□□ -0.38
UBR1-206ENST00000566493 SF3A2Q15428 464 aaKnown RBP12.67□□□□□ -0.38
UBR1-206ENST00000566493 CCDC6Q16204 474 aa12.67□□□□□ -0.38
UBR1-206ENST00000566493 KMT5BQ4FZB7 885 aa12.67□□□□□ -0.38
UBR1-206ENST00000566493 USP39Q53GS9 565 aaKnown RBP12.67□□□□□ -0.38
UBR1-206ENST00000566493 HECTD3Q5T447 861 aa12.67□□□□□ -0.38
UBR1-206ENST00000566493 SCARA5Q6ZMJ2 495 aa12.67□□□□□ -0.38
UBR1-206ENST00000566493 C11orf74Q86VG3 221 aa12.67□□□□□ -0.38
UBR1-206ENST00000566493 SLC9A9Q8IVB4 645 aa12.67□□□□□ -0.38
UBR1-206ENST00000566493 ADGRG2Q8IZP9 1017 aa12.67□□□□□ -0.38
UBR1-206ENST00000566493 USP33Q8TEY7 942 aa12.67□□□□□ -0.38
UBR1-206ENST00000566493 CCDC47Q96A33 483 aaKnown RBP12.67□□□□□ -0.38
UBR1-206ENST00000566493 SMARCD1Q96GM5 515 aa12.67□□□□□ -0.38
UBR1-206ENST00000566493 PNKPQ96T60 521 aa12.67□□□□□ -0.38
UBR1-206ENST00000566493 NACA2Q9H009 215 aa12.67□□□□□ -0.38
UBR1-206ENST00000566493 DMAP1Q9NPF5 467 aaPredicted RBP12.67□□□□□ -0.38
UBR1-206ENST00000566493 VPS45Q9NRW7 570 aa12.67□□□□□ -0.38
UBR1-206ENST00000566493 COMMD8Q9NX08 183 aa12.67□□□□□ -0.38
UBR1-206ENST00000566493 CHORDC1Q9UHD1 332 aaPredicted RBP12.67□□□□□ -0.38
UBR1-206ENST00000566493 FRMD4BQ9Y2L6 1034 aa12.67□□□□□ -0.38
UBR1-206ENST00000566493 A0A1B0GVL5 298 aa12.66□□□□□ -0.38
UBR1-206ENST00000566493 E2F8A0AVK6 867 aa12.66□□□□□ -0.38
UBR1-206ENST00000566493 K7EQS6 105 aa12.66□□□□□ -0.38
UBR1-206ENST00000566493 PDXKO00764 312 aa12.66□□□□□ -0.38
UBR1-206ENST00000566493 SCAMP3O14828 347 aaKnown RBP12.66□□□□□ -0.38
UBR1-206ENST00000566493 ACTN4O43707 911 aaKnown RBP12.66□□□□□ -0.38
UBR1-206ENST00000566493 CALUO43852 315 aaPredicted RBP12.66□□□□□ -0.38
UBR1-206ENST00000566493 KLRC4O43908 158 aa12.66□□□□□ -0.38
UBR1-206ENST00000566493 NR3C1P04150 777 aa12.66□□□□□ -0.38
UBR1-206ENST00000566493 APODP05090 189 aa12.66□□□□□ -0.38
UBR1-206ENST00000566493 MYL1P05976 194 aa12.66□□□□□ -0.38
UBR1-206ENST00000566493 GBP1P32455 592 aa12.66□□□□□ -0.38
UBR1-206ENST00000566493 MPLP40238 635 aa12.66□□□□□ -0.38
UBR1-206ENST00000566493 LIMK1P53667 647 aa12.66□□□□□ -0.38
UBR1-206ENST00000566493 MRPS21P82921 87 aaKnown RBP12.66□□□□□ -0.38
UBR1-206ENST00000566493 PKP1Q13835 747 aa12.66□□□□□ -0.38
UBR1-206ENST00000566493 PLK5Q496M5 336 aa12.66□□□□□ -0.38
UBR1-206ENST00000566493 CEP135Q66GS9 1140 aa12.66□□□□□ -0.38
UBR1-206ENST00000566493 ACOT1Q86TX2 421 aa12.66□□□□□ -0.38
UBR1-206ENST00000566493 FAM35AQ86V20 835 aa12.66□□□□□ -0.38
UBR1-206ENST00000566493 TTC30AQ86WT1 665 aa12.66□□□□□ -0.38
UBR1-206ENST00000566493 CCDC33Q8N5R6 958 aa12.66□□□□□ -0.38
UBR1-206ENST00000566493 KIAA0895Q8NCT3 520 aa12.66□□□□□ -0.38
UBR1-206ENST00000566493 PLEKHO2Q8TD55 490 aa12.66□□□□□ -0.38
UBR1-206ENST00000566493 TMEM174Q8WUU8 243 aa12.66□□□□□ -0.38
UBR1-206ENST00000566493 TAF4BQ92750 862 aa12.66□□□□□ -0.38
UBR1-206ENST00000566493 KCNK16Q96T55 309 aa12.66□□□□□ -0.38
UBR1-206ENST00000566493 TMEM121BQ9BXQ6 578 aaPredicted RBP12.66□□□□□ -0.38
UBR1-206ENST00000566493 DUSP15Q9H1R2 295 aaPredicted RBP12.66□□□□□ -0.38
UBR1-206ENST00000566493 TMEM30AQ9NV96 361 aa12.66□□□□□ -0.38
UBR1-206ENST00000566493 DMAC2Q9NW81 257 aa12.66□□□□□ -0.38
UBR1-206ENST00000566493 SH3BP1Q9Y3L3 701 aa12.66□□□□□ -0.38
UBR1-206ENST00000566493 MYH10P35580 1976 aa12.65□□□□□ -0.38
UBR1-206ENST00000566493 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.65□□□□□ -0.38
UBR1-206ENST00000566493 COCHO43405 550 aa12.65□□□□□ -0.38
UBR1-206ENST00000566493 AP1G2O75843 785 aa12.65□□□□□ -0.38
UBR1-206ENST00000566493 ALDH1A2O94788 518 aa12.65□□□□□ -0.38
UBR1-206ENST00000566493 KAT7O95251 611 aa12.65□□□□□ -0.38
UBR1-206ENST00000566493 VNN1O95497 513 aa12.65□□□□□ -0.38
UBR1-206ENST00000566493 ADRB1P08588 477 aa12.65□□□□□ -0.38
UBR1-206ENST00000566493 ADH5P11766 374 aa12.65□□□□□ -0.38
UBR1-206ENST00000566493 PFKFB1P16118 471 aa12.65□□□□□ -0.38
UBR1-206ENST00000566493 CMA1P23946 247 aa12.65□□□□□ -0.38
UBR1-206ENST00000566493 EIF2DP41214 584 aaKnown RBP12.65□□□□□ -0.38
UBR1-206ENST00000566493 SLC6A11P48066 632 aa12.65□□□□□ -0.38
UBR1-206ENST00000566493 SLC5A3P53794 718 aa12.65□□□□□ -0.38
UBR1-206ENST00000566493 CREB5Q02930 508 aa12.65□□□□□ -0.38
UBR1-206ENST00000566493 GAD2Q05329 585 aa12.65□□□□□ -0.38
UBR1-206ENST00000566493 PREPLQ4J6C6 727 aaPredicted RBP12.65□□□□□ -0.38
UBR1-206ENST00000566493 BTBD8Q5XKL5 378 aa12.65□□□□□ -0.38
UBR1-206ENST00000566493 ANO7Q6IWH7 933 aa12.65□□□□□ -0.38
UBR1-206ENST00000566493 SCAMP5Q8TAC9 235 aa12.65□□□□□ -0.38
UBR1-206ENST00000566493 TMC2Q8TDI7 906 aa12.65□□□□□ -0.38
UBR1-206ENST00000566493 OTUB2Q96DC9 234 aa12.65□□□□□ -0.38
UBR1-206ENST00000566493 SPATA32Q96LK8 384 aa12.65□□□□□ -0.38
UBR1-206ENST00000566493 TPSD1Q9BZJ3 242 aa12.65□□□□□ -0.38
UBR1-206ENST00000566493 DNAI2Q9GZS0 605 aa12.65□□□□□ -0.38
UBR1-206ENST00000566493 KCTD10Q9H3F6 313 aa12.65□□□□□ -0.38
UBR1-206ENST00000566493 FBXO44Q9H4M3 255 aa12.65□□□□□ -0.38
UBR1-206ENST00000566493 ARHGEF4Q9NR80 690 aa12.65□□□□□ -0.38
UBR1-206ENST00000566493 KRT82Q9NSB4 513 aa12.65□□□□□ -0.38
UBR1-206ENST00000566493 MMP17Q9ULZ9 603 aa12.65□□□□□ -0.38
UBR1-206ENST00000566493 TNFRSF10BO14763 440 aa12.64□□□□□ -0.39
UBR1-206ENST00000566493 IKBKBO14920 756 aa12.64□□□□□ -0.39
UBR1-206ENST00000566493 DCLK1O15075 740 aa12.64□□□□□ -0.39
UBR1-206ENST00000566493 CAVIN2O95810 425 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms