RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 DUSP4Q13115 394 aa19.66■□□□□ 0.74
COMMD4-213ENST00000565834 DDR2Q16832 855 aa19.66■□□□□ 0.74
COMMD4-213ENST00000565834 MGAT5BQ3V5L5 792 aa19.66■□□□□ 0.74
COMMD4-213ENST00000565834 TPGS2Q68CL5 300 aa19.66■□□□□ 0.74
COMMD4-213ENST00000565834 UBL4BQ8N7F7 174 aa19.66■□□□□ 0.74
COMMD4-213ENST00000565834 RXFP2Q8WXD0 754 aa19.66■□□□□ 0.74
COMMD4-213ENST00000565834 NDRG1Q92597 394 aaKnown RBP19.66■□□□□ 0.74
COMMD4-213ENST00000565834 CD101Q93033 1021 aa19.66■□□□□ 0.74
COMMD4-213ENST00000565834 C17orf80Q9BSJ5 609 aa19.66■□□□□ 0.74
COMMD4-213ENST00000565834 ASNSD1Q9NWL6 643 aa19.66■□□□□ 0.74
COMMD4-213ENST00000565834 FNIP2Q9P278 1114 aa19.66■□□□□ 0.74
COMMD4-213ENST00000565834 AFF4Q9UHB7 1163 aaKnown RBP19.66■□□□□ 0.74
COMMD4-213ENST00000565834 CDC23Q9UJX2 597 aa19.66■□□□□ 0.74
COMMD4-213ENST00000565834 MRFAP1Q9Y605 127 aa19.66■□□□□ 0.74
COMMD4-213ENST00000565834 TNFRSF10BO14763 440 aa19.65■□□□□ 0.74
COMMD4-213ENST00000565834 CA3P07451 260 aa19.65■□□□□ 0.74
COMMD4-213ENST00000565834 GLI1P08151 1106 aa19.65■□□□□ 0.74
COMMD4-213ENST00000565834 USP17L7P0C7H9 530 aa19.65■□□□□ 0.74
COMMD4-213ENST00000565834 CA8P35219 290 aa19.65■□□□□ 0.74
COMMD4-213ENST00000565834 GPR15P49685 360 aa19.65■□□□□ 0.74
COMMD4-213ENST00000565834 TRNP1Q6NT89 227 aa19.65■□□□□ 0.74
COMMD4-213ENST00000565834 SCML4Q8N228 414 aa19.65■□□□□ 0.74
COMMD4-213ENST00000565834 ZNF461Q8TAF7 563 aa19.65■□□□□ 0.74
COMMD4-213ENST00000565834 GDF15Q99988 308 aa19.65■□□□□ 0.74
COMMD4-213ENST00000565834 CNPY3Q9BT09 278 aa19.65■□□□□ 0.74
COMMD4-213ENST00000565834 CRISPLD1Q9H336 500 aa19.65■□□□□ 0.74
COMMD4-213ENST00000565834 PCDHA11Q9Y5I1 949 aa19.65■□□□□ 0.74
COMMD4-213ENST00000565834 USP3Q9Y6I4 520 aa19.65■□□□□ 0.74
COMMD4-213ENST00000565834 GREB1Q4ZG55 1949 aa19.65■□□□□ 0.74
COMMD4-213ENST00000565834 CCDC66A2RUB6 948 aa19.65■□□□□ 0.74
COMMD4-213ENST00000565834 DPYSL4O14531 572 aa19.65■□□□□ 0.74
COMMD4-213ENST00000565834 KCNK3O14649 394 aa19.65■□□□□ 0.74
COMMD4-213ENST00000565834 DDX3YO15523 660 aaKnown RBP19.65■□□□□ 0.74
COMMD4-213ENST00000565834 LILRB3O75022 631 aa19.65■□□□□ 0.74
COMMD4-213ENST00000565834 SRGAP2O75044 1071 aa19.65■□□□□ 0.74
COMMD4-213ENST00000565834 ABLIM3O94929 683 aa19.65■□□□□ 0.74
COMMD4-213ENST00000565834 ARHGEF15O94989 841 aa19.65■□□□□ 0.74
COMMD4-213ENST00000565834 DESP17661 470 aa19.65■□□□□ 0.74
COMMD4-213ENST00000565834 CTNNA2P26232 953 aa19.65■□□□□ 0.74
COMMD4-213ENST00000565834 SDC4P31431 198 aa19.65■□□□□ 0.74
COMMD4-213ENST00000565834 CXCR5P32302 372 aa19.65■□□□□ 0.74
COMMD4-213ENST00000565834 CTNNA1P35221 906 aaKnown RBP19.65■□□□□ 0.74
COMMD4-213ENST00000565834 SSR1P43307 286 aaKnown RBP19.65■□□□□ 0.74
COMMD4-213ENST00000565834 RPL10AP62906 217 aaKnown RBP19.65■□□□□ 0.74
COMMD4-213ENST00000565834 YWHAZP63104 245 aaKnown RBP19.65■□□□□ 0.74
COMMD4-213ENST00000565834 RAB33AQ14088 237 aa19.65■□□□□ 0.74
COMMD4-213ENST00000565834 ACAP1Q15027 740 aa19.65■□□□□ 0.74
COMMD4-213ENST00000565834 SDHAF4Q5VUM1 108 aa19.65■□□□□ 0.74
COMMD4-213ENST00000565834 DAB2IPQ5VWQ8 1189 aa19.65■□□□□ 0.74
COMMD4-213ENST00000565834 PM20D1Q6GTS8 502 aa19.65■□□□□ 0.74
COMMD4-213ENST00000565834 TMC7Q7Z402 723 aa19.65■□□□□ 0.74
COMMD4-213ENST00000565834 SCAMP5Q8TAC9 235 aa19.65■□□□□ 0.74
COMMD4-213ENST00000565834 IRGQQ8WZA9 623 aa19.65■□□□□ 0.74
COMMD4-213ENST00000565834 L2HGDHQ9H9P8 463 aa19.65■□□□□ 0.74
COMMD4-213ENST00000565834 RXFP1Q9HBX9 757 aa19.65■□□□□ 0.74
COMMD4-213ENST00000565834 ALG13Q9NP73 1137 aaKnown RBP19.65■□□□□ 0.74
COMMD4-213ENST00000565834 ZNF638Q14966 1978 aaKnown RBP19.65■□□□□ 0.74
COMMD4-213ENST00000565834 C5orf67F2Z3F1 127 aa19.64■□□□□ 0.73
COMMD4-213ENST00000565834 DAB1O75553 588 aa19.64■□□□□ 0.73
COMMD4-213ENST00000565834 SOAT2O75908 522 aa19.64■□□□□ 0.73
COMMD4-213ENST00000565834 TUFMP49411 452 aaKnown RBP19.64■□□□□ 0.73
COMMD4-213ENST00000565834 IFRD2Q12894 506 aaPredicted RBP19.64■□□□□ 0.73
COMMD4-213ENST00000565834 CC2D1AQ6P1N0 951 aaPredicted RBP19.64■□□□□ 0.73
COMMD4-213ENST00000565834 NUP93Q8N1F7 819 aa19.64■□□□□ 0.73
COMMD4-213ENST00000565834 KRT35Q92764 455 aa19.64■□□□□ 0.73
COMMD4-213ENST00000565834 CFAP57Q96MR6 1250 aa19.64■□□□□ 0.73
COMMD4-213ENST00000565834 C11orf84Q9BUA3 381 aaPredicted RBP19.64■□□□□ 0.73
COMMD4-213ENST00000565834 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.64■□□□□ 0.73
COMMD4-213ENST00000565834 HSFX1Q9UBD0 423 aa19.64■□□□□ 0.73
COMMD4-213ENST00000565834 MTUS1Q9ULD2 1270 aa19.64■□□□□ 0.73
COMMD4-213ENST00000565834 PLXNA3P51805 1871 aa19.64■□□□□ 0.73
COMMD4-213ENST00000565834 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.63■□□□□ 0.73
COMMD4-213ENST00000565834 YJEFN3A6XGL0 299 aa19.63■□□□□ 0.73
COMMD4-213ENST00000565834 E7ENQ6 273 aa19.63■□□□□ 0.73
COMMD4-213ENST00000565834 TEX28O15482 410 aa19.63■□□□□ 0.73
COMMD4-213ENST00000565834 RNF8O76064 485 aa19.63■□□□□ 0.73
COMMD4-213ENST00000565834 CXCL14O95715 111 aa19.63■□□□□ 0.73
COMMD4-213ENST00000565834 LTFP02788 710 aa19.63■□□□□ 0.73
COMMD4-213ENST00000565834 RB1P06400 928 aa19.63■□□□□ 0.73
COMMD4-213ENST00000565834 ATF2P15336 505 aa19.63■□□□□ 0.73
COMMD4-213ENST00000565834 UBE3AQ05086 875 aa19.63■□□□□ 0.73
COMMD4-213ENST00000565834 CCDC14Q49A88 953 aa19.63■□□□□ 0.73
COMMD4-213ENST00000565834 COG1Q8WTW3 980 aa19.63■□□□□ 0.73
COMMD4-213ENST00000565834 GOLGA1Q92805 767 aa19.63■□□□□ 0.73
COMMD4-213ENST00000565834 PBKQ96KB5 322 aa19.63■□□□□ 0.73
COMMD4-213ENST00000565834 SPATA17Q96L03 361 aa19.63■□□□□ 0.73
COMMD4-213ENST00000565834 SAMD11Q96NU1 681 aa19.63■□□□□ 0.73
COMMD4-213ENST00000565834 TCF25Q9BQ70 676 aa19.63■□□□□ 0.73
COMMD4-213ENST00000565834 FBXO44Q9H4M3 255 aa19.63■□□□□ 0.73
COMMD4-213ENST00000565834 POPDC2Q9HBU9 364 aa19.63■□□□□ 0.73
COMMD4-213ENST00000565834 ENTPD7Q9NQZ7 604 aa19.63■□□□□ 0.73
COMMD4-213ENST00000565834 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.63■□□□□ 0.73
COMMD4-213ENST00000565834 PCDHA3Q9Y5H8 950 aa19.63■□□□□ 0.73
COMMD4-213ENST00000565834 H0YGN5 161 aa19.62■□□□□ 0.73
COMMD4-213ENST00000565834 ZNF185O15231 689 aa19.62■□□□□ 0.73
COMMD4-213ENST00000565834 PSTPIP1O43586 416 aa19.62■□□□□ 0.73
COMMD4-213ENST00000565834 MATKP42679 507 aa19.62■□□□□ 0.73
COMMD4-213ENST00000565834 PTPN9P43378 593 aa19.62■□□□□ 0.73
COMMD4-213ENST00000565834 MARCKSL1P49006 195 aa19.62■□□□□ 0.73
COMMD4-213ENST00000565834 TAS2R40P59535 323 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms