RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 NFE2L3Q9Y4A8 694 aa16.29■□□□□ 0.2
COMMD4-212ENST00000565517 USP3Q9Y6I4 520 aa16.29■□□□□ 0.2
COMMD4-212ENST00000565517 SHISA7A6NL88 538 aa16.28■□□□□ 0.2
COMMD4-212ENST00000565517 KCNJ18B7U540 433 aa16.28■□□□□ 0.2
COMMD4-212ENST00000565517 RNF225M0QZC1 329 aaPredicted RBP16.28■□□□□ 0.2
COMMD4-212ENST00000565517 CD19P15391 556 aa16.28■□□□□ 0.2
COMMD4-212ENST00000565517 ZNF132P52740 706 aa16.28■□□□□ 0.2
COMMD4-212ENST00000565517 BCAT1P54687 386 aa16.28■□□□□ 0.2
COMMD4-212ENST00000565517 MFAP3P55082 362 aa16.28■□□□□ 0.2
COMMD4-212ENST00000565517 KCNJ12Q14500 433 aa16.28■□□□□ 0.2
COMMD4-212ENST00000565517 MTF1Q14872 753 aa16.28■□□□□ 0.2
COMMD4-212ENST00000565517 STILQ15468 1287 aa16.28■□□□□ 0.2
COMMD4-212ENST00000565517 CNGA2Q16280 664 aa16.28■□□□□ 0.2
COMMD4-212ENST00000565517 TCP11X2Q5H9J9 407 aa16.28■□□□□ 0.2
COMMD4-212ENST00000565517 MIIPQ5JXC2 388 aa16.28■□□□□ 0.2
COMMD4-212ENST00000565517 LCLAT1Q6UWP7 414 aa16.28■□□□□ 0.2
COMMD4-212ENST00000565517 GPRIN1Q7Z2K8 1008 aa16.28■□□□□ 0.2
COMMD4-212ENST00000565517 RIN3Q8TB24 985 aa16.28■□□□□ 0.2
COMMD4-212ENST00000565517 ZFYVE19Q96K21 471 aa16.28■□□□□ 0.2
COMMD4-212ENST00000565517 CRACR2AQ9BSW2 395 aa16.28■□□□□ 0.2
COMMD4-212ENST00000565517 NDST4Q9H3R1 872 aa16.28■□□□□ 0.2
COMMD4-212ENST00000565517 LTB4R2Q9NPC1 389 aa16.28■□□□□ 0.2
COMMD4-212ENST00000565517 UBE2TQ9NPD8 197 aaPredicted RBP16.28■□□□□ 0.2
COMMD4-212ENST00000565517 SAMSN1Q9NSI8 373 aaKnown RBP16.28■□□□□ 0.2
COMMD4-212ENST00000565517 GMIPQ9P107 970 aa16.28■□□□□ 0.2
COMMD4-212ENST00000565517 TMEM63CQ9P1W3 806 aa16.28■□□□□ 0.2
COMMD4-212ENST00000565517 HESX1Q9UBX0 185 aa16.28■□□□□ 0.2
COMMD4-212ENST00000565517 RAPGEFL1Q9UHV5 662 aa16.28■□□□□ 0.2
COMMD4-212ENST00000565517 TSPAN16Q9UKR8 245 aa16.28■□□□□ 0.2
COMMD4-212ENST00000565517 PIAS3Q9Y6X2 628 aa16.28■□□□□ 0.2
COMMD4-212ENST00000565517 O00370 1275 aa16.27■□□□□ 0.2
COMMD4-212ENST00000565517 XPO1O14980 1071 aaKnown RBP16.27■□□□□ 0.2
COMMD4-212ENST00000565517 NCAM2O15394 837 aa16.27■□□□□ 0.2
COMMD4-212ENST00000565517 GALR2O43603 387 aaPredicted RBP16.27■□□□□ 0.2
COMMD4-212ENST00000565517 SLC9A1P19634 815 aa16.27■□□□□ 0.2
COMMD4-212ENST00000565517 PON1P27169 355 aa16.27■□□□□ 0.2
COMMD4-212ENST00000565517 PSEN1P49768 467 aa16.27■□□□□ 0.2
COMMD4-212ENST00000565517 BST2Q10589 180 aaKnown RBP16.27■□□□□ 0.2
COMMD4-212ENST00000565517 PDGFRLQ15198 375 aa16.27■□□□□ 0.2
COMMD4-212ENST00000565517 GOLGA7BQ2TAP0 167 aa16.27■□□□□ 0.2
COMMD4-212ENST00000565517 ITPRIPL2Q3MIP1 535 aa16.27■□□□□ 0.2
COMMD4-212ENST00000565517 RAB41Q5JT25 222 aa16.27■□□□□ 0.2
COMMD4-212ENST00000565517 CCDC186Q7Z3E2 898 aa16.27■□□□□ 0.2
COMMD4-212ENST00000565517 PIGZQ86VD9 579 aa16.27■□□□□ 0.2
COMMD4-212ENST00000565517 TTC30AQ86WT1 665 aa16.27■□□□□ 0.2
COMMD4-212ENST00000565517 RALGPS2Q86X27 583 aaPredicted RBP16.27■□□□□ 0.2
COMMD4-212ENST00000565517 DDX42Q86XP3 938 aaKnown RBP eCLIP16.27■□□□□ 0.2
COMMD4-212ENST00000565517 ZNF276Q8N554 614 aa16.27■□□□□ 0.2
COMMD4-212ENST00000565517 RBBP8NLQ8NC74 664 aaPredicted RBP16.27■□□□□ 0.2
COMMD4-212ENST00000565517 SH3RF2Q8TEC5 729 aa16.27■□□□□ 0.2
COMMD4-212ENST00000565517 OSCP1Q8WVF1 389 aa16.27■□□□□ 0.2
COMMD4-212ENST00000565517 FOXQ1Q9C009 403 aa16.27■□□□□ 0.2
COMMD4-212ENST00000565517 CYLDQ9NQC7 956 aa16.27■□□□□ 0.2
COMMD4-212ENST00000565517 GTSE1Q9NYZ3 720 aa16.27■□□□□ 0.2
COMMD4-212ENST00000565517 DLGAP2Q9P1A6 1054 aa16.27■□□□□ 0.2
COMMD4-212ENST00000565517 APEX2Q9UBZ4 518 aa16.27■□□□□ 0.2
COMMD4-212ENST00000565517 COL4A3Q01955 1670 aa16.27■□□□□ 0.19
COMMD4-212ENST00000565517 FAM170BA6NMN3 283 aa16.26■□□□□ 0.19
COMMD4-212ENST00000565517 LEFTY2O00292 366 aa16.26■□□□□ 0.19
COMMD4-212ENST00000565517 COCHO43405 550 aa16.26■□□□□ 0.19
COMMD4-212ENST00000565517 SETSIPP0DME0 302 aa16.26■□□□□ 0.19
COMMD4-212ENST00000565517 CD72P21854 359 aa16.26■□□□□ 0.19
COMMD4-212ENST00000565517 MAGEA9P43362 315 aa16.26■□□□□ 0.19
COMMD4-212ENST00000565517 KPNA1P52294 538 aaPredicted RBP16.26■□□□□ 0.19
COMMD4-212ENST00000565517 ZXDBP98169 803 aa16.26■□□□□ 0.19
COMMD4-212ENST00000565517 PDE4CQ08493 712 aa16.26■□□□□ 0.19
COMMD4-212ENST00000565517 RUNX3Q13761 415 aa16.26■□□□□ 0.19
COMMD4-212ENST00000565517 PKDCCQ504Y2 493 aa16.26■□□□□ 0.19
COMMD4-212ENST00000565517 HSP90AA4PQ58FG1 418 aa16.26■□□□□ 0.19
COMMD4-212ENST00000565517 CDKAL1Q5VV42 579 aa16.26■□□□□ 0.19
COMMD4-212ENST00000565517 CCDC105Q8IYK2 499 aa16.26■□□□□ 0.19
COMMD4-212ENST00000565517 TFAP2BQ92481 460 aa16.26■□□□□ 0.19
COMMD4-212ENST00000565517 FAM3CQ92520 227 aa16.26■□□□□ 0.19
COMMD4-212ENST00000565517 CLDN23Q96B33 292 aa16.26■□□□□ 0.19
COMMD4-212ENST00000565517 IRF2BPLQ9H1B7 796 aa16.26■□□□□ 0.19
COMMD4-212ENST00000565517 HPS4Q9NQG7 708 aa16.26■□□□□ 0.19
COMMD4-212ENST00000565517 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.26■□□□□ 0.19
COMMD4-212ENST00000565517 CPQQ9Y646 472 aa16.26■□□□□ 0.19
COMMD4-212ENST00000565517 CYP26A1O43174 497 aa16.25■□□□□ 0.19
COMMD4-212ENST00000565517 TLR5O60602 858 aa16.25■□□□□ 0.19
COMMD4-212ENST00000565517 MBL2P11226 248 aaPredicted RBP16.25■□□□□ 0.19
COMMD4-212ENST00000565517 PTMSP20962 102 aa16.25■□□□□ 0.19
COMMD4-212ENST00000565517 TARSP26639 723 aaKnown RBP16.25■□□□□ 0.19
COMMD4-212ENST00000565517 CTHP32929 405 aa16.25■□□□□ 0.19
COMMD4-212ENST00000565517 PLA2G4AP47712 749 aa16.25■□□□□ 0.19
COMMD4-212ENST00000565517 TNK2Q07912 1038 aa16.25■□□□□ 0.19
COMMD4-212ENST00000565517 UBXN2BQ14CS0 331 aa16.25■□□□□ 0.19
COMMD4-212ENST00000565517 PM20D1Q6GTS8 502 aa16.25■□□□□ 0.19
COMMD4-212ENST00000565517 KLHDC10Q6PID8 442 aa16.25■□□□□ 0.19
COMMD4-212ENST00000565517 C11orf57Q6ZUT1 292 aaPredicted RBP16.25■□□□□ 0.19
COMMD4-212ENST00000565517 ZNF687Q8N1G0 1237 aa16.25■□□□□ 0.19
COMMD4-212ENST00000565517 DTWD2Q8NBA8 298 aa16.25■□□□□ 0.19
COMMD4-212ENST00000565517 PRSS33Q8NF86 280 aa16.25■□□□□ 0.19
COMMD4-212ENST00000565517 KCTD13Q8WZ19 329 aa16.25■□□□□ 0.19
COMMD4-212ENST00000565517 ATP2A3Q93084 1043 aa16.25■□□□□ 0.19
COMMD4-212ENST00000565517 EBF3Q9H4W6 596 aa16.25■□□□□ 0.19
COMMD4-212ENST00000565517 CCSER2Q9H7U1 834 aa16.25■□□□□ 0.19
COMMD4-212ENST00000565517 DUS2Q9NX74 493 aaKnown RBP16.25■□□□□ 0.19
COMMD4-212ENST00000565517 CLIC5Q9NZA1 410 aa16.25■□□□□ 0.19
COMMD4-212ENST00000565517 MTF2Q9Y483 593 aaPredicted RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms