RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 PAEPP09466 180 aa10.49□□□□□ -0.73
CDH1-206ENST00000564676 MBL2P11226 248 aaPredicted RBP10.49□□□□□ -0.73
CDH1-206ENST00000564676 KRT5P13647 590 aa10.49□□□□□ -0.73
CDH1-206ENST00000564676 AOC1P19801 751 aa10.49□□□□□ -0.73
CDH1-206ENST00000564676 KPNA1P52294 538 aaPredicted RBP10.49□□□□□ -0.73
CDH1-206ENST00000564676 BCAT1P54687 386 aa10.49□□□□□ -0.73
CDH1-206ENST00000564676 MFAP3P55082 362 aa10.49□□□□□ -0.73
CDH1-206ENST00000564676 UBXN2BQ14CS0 331 aa10.49□□□□□ -0.73
CDH1-206ENST00000564676 TCP11X2Q5H9J9 407 aa10.49□□□□□ -0.73
CDH1-206ENST00000564676 HECTD3Q5T447 861 aa10.49□□□□□ -0.73
CDH1-206ENST00000564676 TRIM65Q6PJ69 517 aa10.49□□□□□ -0.73
CDH1-206ENST00000564676 ZNF852Q6ZMS4 543 aa10.49□□□□□ -0.73
CDH1-206ENST00000564676 C11orf57Q6ZUT1 292 aaPredicted RBP10.49□□□□□ -0.73
CDH1-206ENST00000564676 ENOSF1Q7L5Y1 443 aa10.49□□□□□ -0.73
CDH1-206ENST00000564676 GPRIN1Q7Z2K8 1008 aa10.49□□□□□ -0.73
CDH1-206ENST00000564676 TMEM105Q8N8V8 129 aa10.49□□□□□ -0.73
CDH1-206ENST00000564676 RBBP8NLQ8NC74 664 aaPredicted RBP10.49□□□□□ -0.73
CDH1-206ENST00000564676 TTC8Q8TAM2 541 aa10.49□□□□□ -0.73
CDH1-206ENST00000564676 SH3RF2Q8TEC5 729 aa10.49□□□□□ -0.73
CDH1-206ENST00000564676 FAM81BQ96LP2 452 aa10.49□□□□□ -0.73
CDH1-206ENST00000564676 KREMEN1Q96MU8 473 aa10.49□□□□□ -0.73
CDH1-206ENST00000564676 FOXQ1Q9C009 403 aa10.49□□□□□ -0.73
CDH1-206ENST00000564676 NACA2Q9H009 215 aa10.49□□□□□ -0.73
CDH1-206ENST00000564676 RNF38Q9H0F5 515 aa10.49□□□□□ -0.73
CDH1-206ENST00000564676 NDST4Q9H3R1 872 aa10.49□□□□□ -0.73
CDH1-206ENST00000564676 PNPLA8Q9NP80 782 aa10.49□□□□□ -0.73
CDH1-206ENST00000564676 TLR8Q9NR97 1041 aaKnown RBP10.49□□□□□ -0.73
CDH1-206ENST00000564676 GKN1Q9NS71 199 aa10.49□□□□□ -0.73
CDH1-206ENST00000564676 SMPD4Q9NXE4 827 aa10.49□□□□□ -0.73
CDH1-206ENST00000564676 TSPAN16Q9UKR8 245 aa10.49□□□□□ -0.73
CDH1-206ENST00000564676 ARHGAP26Q9UNA1 814 aa10.49□□□□□ -0.73
CDH1-206ENST00000564676 MRPS17Q9Y2R5 130 aaKnown RBP10.49□□□□□ -0.73
CDH1-206ENST00000564676 SIT1Q9Y3P8 196 aa10.49□□□□□ -0.73
CDH1-206ENST00000564676 TRIOO75962 3097 aa10.49□□□□□ -0.73
CDH1-206ENST00000564676 ZNF318Q5VUA4 2279 aa10.48□□□□□ -0.73
CDH1-206ENST00000564676 FAM92AA1XBS5 289 aa10.48□□□□□ -0.73
CDH1-206ENST00000564676 FAM170BA6NMN3 283 aa10.48□□□□□ -0.73
CDH1-206ENST00000564676 MAN2B1O00754 1011 aa10.48□□□□□ -0.73
CDH1-206ENST00000564676 PI15O43692 258 aa10.48□□□□□ -0.73
CDH1-206ENST00000564676 OAS1P00973 400 aaKnown RBP10.48□□□□□ -0.73
CDH1-206ENST00000564676 ZDHHC11BP0C7U3 371 aa10.48□□□□□ -0.73
CDH1-206ENST00000564676 CD72P21854 359 aa10.48□□□□□ -0.73
CDH1-206ENST00000564676 BRD2P25440 801 aaKnown RBP10.48□□□□□ -0.73
CDH1-206ENST00000564676 EEF1GP26641 437 aaKnown RBP10.48□□□□□ -0.73
CDH1-206ENST00000564676 PON1P27169 355 aa10.48□□□□□ -0.73
CDH1-206ENST00000564676 USP8P40818 1118 aa10.48□□□□□ -0.73
CDH1-206ENST00000564676 IFNAR2P48551 515 aa10.48□□□□□ -0.73
CDH1-206ENST00000564676 KIF11P52732 1056 aa10.48□□□□□ -0.73
CDH1-206ENST00000564676 SLC7A9P82251 487 aa10.48□□□□□ -0.73
CDH1-206ENST00000564676 TYRO3Q06418 890 aa10.48□□□□□ -0.73
CDH1-206ENST00000564676 TNK2Q07912 1038 aa10.48□□□□□ -0.73
CDH1-206ENST00000564676 PDE4CQ08493 712 aa10.48□□□□□ -0.73
CDH1-206ENST00000564676 MTF1Q14872 753 aa10.48□□□□□ -0.73
CDH1-206ENST00000564676 STILQ15468 1287 aa10.48□□□□□ -0.73
CDH1-206ENST00000564676 ZNF77Q15935 545 aa10.48□□□□□ -0.73
CDH1-206ENST00000564676 ARHGAP44Q17R89 818 aa10.48□□□□□ -0.73
CDH1-206ENST00000564676 GJB7Q6PEY0 223 aa10.48□□□□□ -0.73
CDH1-206ENST00000564676 PIGZQ86VD9 579 aa10.48□□□□□ -0.73
CDH1-206ENST00000564676 TTC30AQ86WT1 665 aa10.48□□□□□ -0.73
CDH1-206ENST00000564676 UBA3Q8TBC4 463 aa10.48□□□□□ -0.73
CDH1-206ENST00000564676 TFAP2BQ92481 460 aa10.48□□□□□ -0.73
CDH1-206ENST00000564676 NELL2Q99435 816 aa10.48□□□□□ -0.73
CDH1-206ENST00000564676 UBXN6Q9BZV1 441 aa10.48□□□□□ -0.73
CDH1-206ENST00000564676 NAT10Q9H0A0 1025 aaKnown RBP10.48□□□□□ -0.73
CDH1-206ENST00000564676 C8orf33Q9H7E9 229 aaPredicted RBP10.48□□□□□ -0.73
CDH1-206ENST00000564676 LRRC4Q9HBW1 653 aa10.48□□□□□ -0.73
CDH1-206ENST00000564676 FANCLQ9NW38 375 aa10.48□□□□□ -0.73
CDH1-206ENST00000564676 DUS2Q9NX74 493 aaKnown RBP10.48□□□□□ -0.73
CDH1-206ENST00000564676 TAB2Q9NYJ8 693 aa10.48□□□□□ -0.73
CDH1-206ENST00000564676 GTSE1Q9NYZ3 720 aa10.48□□□□□ -0.73
CDH1-206ENST00000564676 APEX2Q9UBZ4 518 aa10.48□□□□□ -0.73
CDH1-206ENST00000564676 SCML2Q9UQR0 700 aa10.48□□□□□ -0.73
CDH1-206ENST00000564676 CPQQ9Y646 472 aa10.48□□□□□ -0.73
CDH1-206ENST00000564676 PIAS3Q9Y6X2 628 aa10.48□□□□□ -0.73
CDH1-206ENST00000564676 TICRRQ7Z2Z1 1910 aa10.47□□□□□ -0.73
CDH1-206ENST00000564676 M0QYV0 167 aa10.47□□□□□ -0.73
CDH1-206ENST00000564676 LEFTY2O00292 366 aa10.47□□□□□ -0.73
CDH1-206ENST00000564676 ARNTLO00327 626 aa10.47□□□□□ -0.73
CDH1-206ENST00000564676 O00370 1275 aa10.47□□□□□ -0.73
CDH1-206ENST00000564676 XPO1O14980 1071 aaKnown RBP10.47□□□□□ -0.73
CDH1-206ENST00000564676 NCAM2O15394 837 aa10.47□□□□□ -0.73
CDH1-206ENST00000564676 CYP26A1O43174 497 aa10.47□□□□□ -0.73
CDH1-206ENST00000564676 COCHO43405 550 aa10.47□□□□□ -0.73
CDH1-206ENST00000564676 TLR5O60602 858 aa10.47□□□□□ -0.73
CDH1-206ENST00000564676 OLFM2O95897 454 aa10.47□□□□□ -0.73
CDH1-206ENST00000564676 CALCAP01258 141 aa10.47□□□□□ -0.73
CDH1-206ENST00000564676 DCNP07585 359 aaKnown RBP10.47□□□□□ -0.73
CDH1-206ENST00000564676 GLULP15104 373 aa10.47□□□□□ -0.73
CDH1-206ENST00000564676 PTMSP20962 102 aa10.47□□□□□ -0.73
CDH1-206ENST00000564676 CDK11BP21127 795 aaKnown RBP10.47□□□□□ -0.73
CDH1-206ENST00000564676 TUBP50607 506 aa10.47□□□□□ -0.73
CDH1-206ENST00000564676 MYL5Q02045 173 aa10.47□□□□□ -0.73
CDH1-206ENST00000564676 APBA1Q02410 837 aa10.47□□□□□ -0.73
CDH1-206ENST00000564676 BST2Q10589 180 aaKnown RBP10.47□□□□□ -0.73
CDH1-206ENST00000564676 USP4Q13107 963 aa10.47□□□□□ -0.73
CDH1-206ENST00000564676 RUNX3Q13761 415 aa10.47□□□□□ -0.73
CDH1-206ENST00000564676 PDGFRLQ15198 375 aa10.47□□□□□ -0.73
CDH1-206ENST00000564676 CNGA2Q16280 664 aa10.47□□□□□ -0.73
CDH1-206ENST00000564676 ITPRIPL2Q3MIP1 535 aa10.47□□□□□ -0.73
CDH1-206ENST00000564676 MIIPQ5JXC2 388 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms