RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 PHOX2BQ99453 314 aa19.39■□□□□ 0.69
SYNGR3-204ENST00000564642 DUSP16Q9BY84 665 aa19.39■□□□□ 0.69
SYNGR3-204ENST00000564642 PNPLA8Q9NP80 782 aa19.39■□□□□ 0.69
SYNGR3-204ENST00000564642 HPS4Q9NQG7 708 aa19.39■□□□□ 0.69
SYNGR3-204ENST00000564642 TLR8Q9NR97 1041 aaKnown RBP19.39■□□□□ 0.69
SYNGR3-204ENST00000564642 GMIPQ9P107 970 aa19.39■□□□□ 0.69
SYNGR3-204ENST00000564642 CPQQ9Y646 472 aa19.39■□□□□ 0.69
SYNGR3-204ENST00000564642 WDFY4Q6ZS81 3184 aa19.39■□□□□ 0.69
SYNGR3-204ENST00000564642 MYO16Q9Y6X6 1858 aa19.39■□□□□ 0.69
SYNGR3-204ENST00000564642 FAM92AA1XBS5 289 aa19.38■□□□□ 0.69
SYNGR3-204ENST00000564642 GOLGA6L22H0YM25 854 aa19.38■□□□□ 0.69
SYNGR3-204ENST00000564642 LEFTY2O00292 366 aa19.38■□□□□ 0.69
SYNGR3-204ENST00000564642 OLFM2O95897 454 aa19.38■□□□□ 0.69
SYNGR3-204ENST00000564642 AFPP02771 609 aaKnown RBP19.38■□□□□ 0.69
SYNGR3-204ENST00000564642 ARSAP15289 507 aa19.38■□□□□ 0.69
SYNGR3-204ENST00000564642 ACO1P21399 889 aaKnown RBP19.38■□□□□ 0.69
SYNGR3-204ENST00000564642 SLC8A3P57103 927 aa19.38■□□□□ 0.69
SYNGR3-204ENST00000564642 PON2Q15165 354 aa19.38■□□□□ 0.69
SYNGR3-204ENST00000564642 ZNF687Q8N1G0 1237 aa19.38■□□□□ 0.69
SYNGR3-204ENST00000564642 PPM1KQ8N3J5 372 aa19.38■□□□□ 0.69
SYNGR3-204ENST00000564642 CPA6Q8N4T0 437 aa19.38■□□□□ 0.69
SYNGR3-204ENST00000564642 ATP2A3Q93084 1043 aa19.38■□□□□ 0.69
SYNGR3-204ENST00000564642 NACA2Q9H009 215 aa19.38■□□□□ 0.69
SYNGR3-204ENST00000564642 SMPD4Q9NXE4 827 aa19.38■□□□□ 0.69
SYNGR3-204ENST00000564642 WNT6Q9Y6F9 365 aa19.38■□□□□ 0.69
SYNGR3-204ENST00000564642 HHLA1C9JL84 531 aa19.37■□□□□ 0.69
SYNGR3-204ENST00000564642 CHRNB1P11230 501 aa19.37■□□□□ 0.69
SYNGR3-204ENST00000564642 TUBP50607 506 aa19.37■□□□□ 0.69
SYNGR3-204ENST00000564642 ZXDBP98169 803 aa19.37■□□□□ 0.69
SYNGR3-204ENST00000564642 NR1H3Q13133 447 aa19.37■□□□□ 0.69
SYNGR3-204ENST00000564642 LRRC32Q14392 662 aa19.37■□□□□ 0.69
SYNGR3-204ENST00000564642 ARHGAP17Q68EM7 881 aa19.37■□□□□ 0.69
SYNGR3-204ENST00000564642 TXNDC11Q6PKC3 985 aa19.37■□□□□ 0.69
SYNGR3-204ENST00000564642 GPRIN1Q7Z2K8 1008 aa19.37■□□□□ 0.69
SYNGR3-204ENST00000564642 DDX42Q86XP3 938 aaKnown RBP eCLIP19.37■□□□□ 0.69
SYNGR3-204ENST00000564642 EHBP1Q8NDI1 1231 aa19.37■□□□□ 0.69
SYNGR3-204ENST00000564642 DACH1Q9UI36 760 aa19.37■□□□□ 0.69
SYNGR3-204ENST00000564642 SCML2Q9UQR0 700 aa19.37■□□□□ 0.69
SYNGR3-204ENST00000564642 OTOL1A6NHN0 477 aaPredicted RBP19.36■□□□□ 0.69
SYNGR3-204ENST00000564642 COCHO43405 550 aa19.36■□□□□ 0.69
SYNGR3-204ENST00000564642 ZDHHC11BP0C7U3 371 aa19.36■□□□□ 0.69
SYNGR3-204ENST00000564642 CD19P15391 556 aa19.36■□□□□ 0.69
SYNGR3-204ENST00000564642 SGO2Q562F6 1265 aa19.36■□□□□ 0.69
SYNGR3-204ENST00000564642 DGKKQ5KSL6 1271 aa19.36■□□□□ 0.69
SYNGR3-204ENST00000564642 LMO3Q8TAP4 145 aa19.36■□□□□ 0.69
SYNGR3-204ENST00000564642 EXOC4Q96A65 974 aa19.36■□□□□ 0.69
SYNGR3-204ENST00000564642 CNOT6LQ96LI5 555 aaKnown RBP19.36■□□□□ 0.69
SYNGR3-204ENST00000564642 IER2Q9BTL4 223 aa19.36■□□□□ 0.69
SYNGR3-204ENST00000564642 LINC00597Q9H2U6 94 aa19.36■□□□□ 0.69
SYNGR3-204ENST00000564642 CHRDQ9H2X0 955 aa19.36■□□□□ 0.69
SYNGR3-204ENST00000564642 CCSER2Q9H7U1 834 aa19.36■□□□□ 0.69
SYNGR3-204ENST00000564642 ECT2Q9H8V3 914 aa19.36■□□□□ 0.69
SYNGR3-204ENST00000564642 HESX1Q9UBX0 185 aa19.36■□□□□ 0.69
SYNGR3-204ENST00000564642 KIAA1257Q9ULG3 409 aa19.36■□□□□ 0.69
SYNGR3-204ENST00000564642 PCDHB4Q9Y5E5 795 aa19.36■□□□□ 0.69
SYNGR3-204ENST00000564642 SLC9A3R1O14745 358 aaPredicted RBP19.35■□□□□ 0.69
SYNGR3-204ENST00000564642 SP9P0CG40 484 aa19.35■□□□□ 0.69
SYNGR3-204ENST00000564642 VDRP11473 427 aa19.35■□□□□ 0.69
SYNGR3-204ENST00000564642 NBL1P41271 181 aa19.35■□□□□ 0.69
SYNGR3-204ENST00000564642 KIF11P52732 1056 aa19.35■□□□□ 0.69
SYNGR3-204ENST00000564642 MTAPQ13126 283 aa19.35■□□□□ 0.69
SYNGR3-204ENST00000564642 EML3Q32P44 896 aa19.35■□□□□ 0.69
SYNGR3-204ENST00000564642 TMEM270Q6UE05 265 aa19.35■□□□□ 0.69
SYNGR3-204ENST00000564642 KIAA1958Q8N8K9 716 aa19.35■□□□□ 0.69
SYNGR3-204ENST00000564642 ANKRD52Q8NB46 1076 aa19.35■□□□□ 0.69
SYNGR3-204ENST00000564642 UBXN6Q9BZV1 441 aa19.35■□□□□ 0.69
SYNGR3-204ENST00000564642 CFAP97Q9P2B7 532 aa19.35■□□□□ 0.69
SYNGR3-204ENST00000564642 FBXO4Q9UKT5 387 aa19.35■□□□□ 0.69
SYNGR3-204ENST00000564642 F5P12259 2224 aa19.35■□□□□ 0.69
SYNGR3-204ENST00000564642 CYP26A1O43174 497 aa19.34■□□□□ 0.69
SYNGR3-204ENST00000564642 TLR5O60602 858 aa19.34■□□□□ 0.69
SYNGR3-204ENST00000564642 NFATC1O95644 943 aa19.34■□□□□ 0.69
SYNGR3-204ENST00000564642 FOXK2Q01167 660 aa19.34■□□□□ 0.69
SYNGR3-204ENST00000564642 CSTF1Q05048 431 aaKnown RBP19.34■□□□□ 0.69
SYNGR3-204ENST00000564642 GRSF1Q12849 480 aaKnown RBP eCLIP19.34■□□□□ 0.69
SYNGR3-204ENST00000564642 GOLGA7BQ2TAP0 167 aa19.34■□□□□ 0.69
SYNGR3-204ENST00000564642 DPCR1Q3MIW9 517 aa19.34■□□□□ 0.69
SYNGR3-204ENST00000564642 RRAGAQ7L523 313 aa19.34■□□□□ 0.69
SYNGR3-204ENST00000564642 UBR7Q8N806 425 aa19.34■□□□□ 0.69
SYNGR3-204ENST00000564642 MED15Q96RN5 788 aa19.34■□□□□ 0.69
SYNGR3-204ENST00000564642 INTS2Q9H0H0 1204 aaKnown RBP19.34■□□□□ 0.69
SYNGR3-204ENST00000564642 RBM12Q9NTZ6 932 aaKnown RBP19.34■□□□□ 0.69
SYNGR3-204ENST00000564642 TSPAN16Q9UKR8 245 aa19.34■□□□□ 0.69
SYNGR3-204ENST00000564642 SH3BP1Q9Y3L3 701 aa19.34■□□□□ 0.69
SYNGR3-204ENST00000564642 CACNA1IQ9P0X4 2223 aa19.34■□□□□ 0.69
SYNGR3-204ENST00000564642 E2F8A0AVK6 867 aa19.33■□□□□ 0.68
SYNGR3-204ENST00000564642 TRDMT1O14717 391 aaKnown RBP19.33■□□□□ 0.68
SYNGR3-204ENST00000564642 PAEPP09466 180 aa19.33■□□□□ 0.68
SYNGR3-204ENST00000564642 ERCC5P28715 1186 aaPredicted RBP19.33■□□□□ 0.68
SYNGR3-204ENST00000564642 GJA4P35212 333 aa19.33■□□□□ 0.68
SYNGR3-204ENST00000564642 ATP5C1P36542 298 aaKnown RBP19.33■□□□□ 0.68
SYNGR3-204ENST00000564642 MTIF2P46199 727 aaKnown RBP19.33■□□□□ 0.68
SYNGR3-204ENST00000564642 PGFP49763 221 aa19.33■□□□□ 0.68
SYNGR3-204ENST00000564642 BCAT1P54687 386 aa19.33■□□□□ 0.68
SYNGR3-204ENST00000564642 GCNT1Q02742 428 aa19.33■□□□□ 0.68
SYNGR3-204ENST00000564642 PPP2R5DQ14738 602 aa19.33■□□□□ 0.68
SYNGR3-204ENST00000564642 ZC3H14Q6PJT7 736 aaKnown RBP19.33■□□□□ 0.68
SYNGR3-204ENST00000564642 PIGZQ86VD9 579 aa19.33■□□□□ 0.68
SYNGR3-204ENST00000564642 ARHGEF19Q8IW93 802 aa19.33■□□□□ 0.68
SYNGR3-204ENST00000564642 FAM114A1Q8IWE2 563 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms