RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 PTPN20Q4JDL3 420 aa7.81□□□□□ -1.16
MAP1LC3B-205ENST00000564638 GLRA4Q5JXX5 417 aa7.81□□□□□ -1.16
MAP1LC3B-205ENST00000564638 ZFYVE27Q5T4F4 411 aa7.81□□□□□ -1.16
MAP1LC3B-205ENST00000564638 DUPD1Q68J44 220 aa7.81□□□□□ -1.16
MAP1LC3B-205ENST00000564638 TTC27Q6P3X3 843 aa7.81□□□□□ -1.16
MAP1LC3B-205ENST00000564638 SYDE1Q6ZW31 735 aaPredicted RBP7.81□□□□□ -1.16
MAP1LC3B-205ENST00000564638 MICALL1Q8N3F8 863 aa7.81□□□□□ -1.16
MAP1LC3B-205ENST00000564638 LRRC52Q8N7C0 313 aa7.81□□□□□ -1.16
MAP1LC3B-205ENST00000564638 NIPA2Q8N8Q9 360 aa7.81□□□□□ -1.16
MAP1LC3B-205ENST00000564638 SLC4A11Q8NBS3 891 aa7.81□□□□□ -1.16
MAP1LC3B-205ENST00000564638 FAM76AQ8TAV0 307 aa7.81□□□□□ -1.16
MAP1LC3B-205ENST00000564638 CXorf38Q8TB03 319 aa7.81□□□□□ -1.16
MAP1LC3B-205ENST00000564638 SLCO2A1Q92959 643 aa7.81□□□□□ -1.16
MAP1LC3B-205ENST00000564638 ZNF560Q96MR9 790 aa7.81□□□□□ -1.16
MAP1LC3B-205ENST00000564638 ZNF558Q96NG5 402 aa7.81□□□□□ -1.16
MAP1LC3B-205ENST00000564638 SAMD11Q96NU1 681 aa7.81□□□□□ -1.16
MAP1LC3B-205ENST00000564638 ZIM3Q96PE6 472 aa7.81□□□□□ -1.16
MAP1LC3B-205ENST00000564638 SH3GL2Q99962 352 aa7.81□□□□□ -1.16
MAP1LC3B-205ENST00000564638 ELOVL4Q9GZR5 314 aa7.81□□□□□ -1.16
MAP1LC3B-205ENST00000564638 CWH43Q9H720 699 aa7.81□□□□□ -1.16
MAP1LC3B-205ENST00000564638 LRRC19Q9H756 370 aa7.81□□□□□ -1.16
MAP1LC3B-205ENST00000564638 NRDE2Q9H7Z3 1164 aa7.81□□□□□ -1.16
MAP1LC3B-205ENST00000564638 FAM204AQ9H8W3 233 aa7.81□□□□□ -1.16
MAP1LC3B-205ENST00000564638 AAASQ9NRG9 546 aa7.81□□□□□ -1.16
MAP1LC3B-205ENST00000564638 TBC1D13Q9NVG8 400 aa7.81□□□□□ -1.16
MAP1LC3B-205ENST00000564638 MIOSQ9NXC5 875 aa7.81□□□□□ -1.16
MAP1LC3B-205ENST00000564638 DDX56Q9NY93 547 aaKnown RBP7.81□□□□□ -1.16
MAP1LC3B-205ENST00000564638 GOLGA6AQ9NYA3 693 aa7.81□□□□□ -1.16
MAP1LC3B-205ENST00000564638 PSD3Q9NYI0 1048 aa7.81□□□□□ -1.16
MAP1LC3B-205ENST00000564638 KIAA1257Q9ULG3 409 aa7.81□□□□□ -1.16
MAP1LC3B-205ENST00000564638 UBQLN1Q9UMX0 589 aaKnown RBP7.81□□□□□ -1.16
MAP1LC3B-205ENST00000564638 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.81□□□□□ -1.16
MAP1LC3B-205ENST00000564638 PLAAQ9Y263 795 aa7.81□□□□□ -1.16
MAP1LC3B-205ENST00000564638 RWDD3Q9Y3V2 267 aa7.81□□□□□ -1.16
MAP1LC3B-205ENST00000564638 PCDHB12Q9Y5F1 795 aa7.81□□□□□ -1.16
MAP1LC3B-205ENST00000564638 TCRBV7S2A1N4TA0A589 114 aa7.8□□□□□ -1.16
MAP1LC3B-205ENST00000564638 AGPSO00116 658 aa7.8□□□□□ -1.16
MAP1LC3B-205ENST00000564638 O00370 1275 aa7.8□□□□□ -1.16
MAP1LC3B-205ENST00000564638 PPFIA2O75334 1257 aa7.8□□□□□ -1.16
MAP1LC3B-205ENST00000564638 MICAL2O94851 1124 aa7.8□□□□□ -1.16
MAP1LC3B-205ENST00000564638 GJB6O95452 261 aa7.8□□□□□ -1.16
MAP1LC3B-205ENST00000564638 SETSIPP0DME0 302 aa7.8□□□□□ -1.16
MAP1LC3B-205ENST00000564638 RALAP11233 206 aa7.8□□□□□ -1.16
MAP1LC3B-205ENST00000564638 PSMA2P25787 234 aa7.8□□□□□ -1.16
MAP1LC3B-205ENST00000564638 CA8P35219 290 aa7.8□□□□□ -1.16
MAP1LC3B-205ENST00000564638 HSD17B3P37058 310 aa7.8□□□□□ -1.16
MAP1LC3B-205ENST00000564638 PNPLA4P41247 253 aa7.8□□□□□ -1.16
MAP1LC3B-205ENST00000564638 OR1G1P47890 313 aa7.8□□□□□ -1.16
MAP1LC3B-205ENST00000564638 NDST1P52848 882 aa7.8□□□□□ -1.16
MAP1LC3B-205ENST00000564638 CDH8P55286 799 aa7.8□□□□□ -1.16
MAP1LC3B-205ENST00000564638 BCAR1P56945 870 aa7.8□□□□□ -1.16
MAP1LC3B-205ENST00000564638 COPS2P61201 443 aa7.8□□□□□ -1.16
MAP1LC3B-205ENST00000564638 RPL7AP62424 266 aaKnown RBP7.8□□□□□ -1.16
MAP1LC3B-205ENST00000564638 CALCOCO2Q13137 446 aa7.8□□□□□ -1.16
MAP1LC3B-205ENST00000564638 ORC1Q13415 861 aa7.8□□□□□ -1.16
MAP1LC3B-205ENST00000564638 ADGRE1Q14246 886 aa7.8□□□□□ -1.16
MAP1LC3B-205ENST00000564638 ZNF268Q14587 947 aaPredicted RBP7.8□□□□□ -1.16
MAP1LC3B-205ENST00000564638 TRADDQ15628 312 aa7.8□□□□□ -1.16
MAP1LC3B-205ENST00000564638 HADHQ16836 314 aaKnown RBP7.8□□□□□ -1.16
MAP1LC3B-205ENST00000564638 SPDYCQ5MJ68 293 aa7.8□□□□□ -1.16
MAP1LC3B-205ENST00000564638 PPP1R15BQ5SWA1 713 aa7.8□□□□□ -1.16
MAP1LC3B-205ENST00000564638 CYP4A22Q5TCH4 519 aa7.8□□□□□ -1.16
MAP1LC3B-205ENST00000564638 KCNT2Q6UVM3 1135 aa7.8□□□□□ -1.16
MAP1LC3B-205ENST00000564638 TMC3Q7Z5M5 1100 aa7.8□□□□□ -1.16
MAP1LC3B-205ENST00000564638 ZNF280BQ86YH2 543 aa7.8□□□□□ -1.16
MAP1LC3B-205ENST00000564638 RCOR2Q8IZ40 523 aa7.8□□□□□ -1.16
MAP1LC3B-205ENST00000564638 KLHL23Q8NBE8 558 aa7.8□□□□□ -1.16
MAP1LC3B-205ENST00000564638 FNIP1Q8TF40 1166 aa7.8□□□□□ -1.16
MAP1LC3B-205ENST00000564638 UBLCP1Q8WVY7 318 aaPredicted RBP7.8□□□□□ -1.16
MAP1LC3B-205ENST00000564638 CLP1Q92989 425 aaKnown RBP7.8□□□□□ -1.16
MAP1LC3B-205ENST00000564638 CCDC114Q96M63 670 aa7.8□□□□□ -1.16
MAP1LC3B-205ENST00000564638 HEXIM2Q96MH2 286 aaKnown RBP7.8□□□□□ -1.16
MAP1LC3B-205ENST00000564638 TWNKQ96RR1 684 aa7.8□□□□□ -1.16
MAP1LC3B-205ENST00000564638 C11orf84Q9BUA3 381 aaPredicted RBP7.8□□□□□ -1.16
MAP1LC3B-205ENST00000564638 NT5C1AQ9BXI3 368 aa7.8□□□□□ -1.16
MAP1LC3B-205ENST00000564638 C1QTNF1Q9BXJ1 281 aa7.8□□□□□ -1.16
MAP1LC3B-205ENST00000564638 OSBPL8Q9BZF1 889 aa7.8□□□□□ -1.16
MAP1LC3B-205ENST00000564638 DCLK3Q9C098 648 aa7.8□□□□□ -1.16
MAP1LC3B-205ENST00000564638 NEUROG2Q9H2A3 272 aa7.8□□□□□ -1.16
MAP1LC3B-205ENST00000564638 CXCL16Q9H2A7 254 aa7.8□□□□□ -1.16
MAP1LC3B-205ENST00000564638 CNTN3Q9P232 1028 aa7.8□□□□□ -1.16
MAP1LC3B-205ENST00000564638 DNAJB4Q9UDY4 337 aa7.8□□□□□ -1.16
MAP1LC3B-205ENST00000564638 HMGXB4Q9UGU5 601 aa7.8□□□□□ -1.16
MAP1LC3B-205ENST00000564638 FEZ2Q9UHY8 353 aaPredicted RBP7.8□□□□□ -1.16
MAP1LC3B-205ENST00000564638 ADAM21Q9UKJ8 722 aa7.8□□□□□ -1.16
MAP1LC3B-205ENST00000564638 PRG3Q9Y2Y8 225 aaPredicted RBP7.8□□□□□ -1.16
MAP1LC3B-205ENST00000564638 SNX24Q9Y343 169 aa7.8□□□□□ -1.16
MAP1LC3B-205ENST00000564638 CASTOR2A6NHX0 329 aa7.79□□□□□ -1.16
MAP1LC3B-205ENST00000564638 SIGLEC16A6NMB1 481 aa7.79□□□□□ -1.16
MAP1LC3B-205ENST00000564638 B4GALT3O60512 393 aa7.79□□□□□ -1.16
MAP1LC3B-205ENST00000564638 DDHD2O94830 711 aa7.79□□□□□ -1.16
MAP1LC3B-205ENST00000564638 ERBB2P04626 1255 aa7.79□□□□□ -1.16
MAP1LC3B-205ENST00000564638 ITGB1P05556 798 aa7.79□□□□□ -1.16
MAP1LC3B-205ENST00000564638 RB1P06400 928 aa7.79□□□□□ -1.16
MAP1LC3B-205ENST00000564638 THP07101 528 aa7.79□□□□□ -1.16
MAP1LC3B-205ENST00000564638 KRT7P08729 469 aa7.79□□□□□ -1.16
MAP1LC3B-205ENST00000564638 LINC00271P0C7V0 271 aa7.79□□□□□ -1.16
MAP1LC3B-205ENST00000564638 KRT3P12035 628 aa7.79□□□□□ -1.16
MAP1LC3B-205ENST00000564638 DESP17661 470 aa7.79□□□□□ -1.16
MAP1LC3B-205ENST00000564638 PTPN7P35236 360 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms