RNA–Protein interactions for RNA: ENST00000564511.1

TUBGCP4-209, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 3

Gene TUBGCP4, Length 588 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-209ENST00000564511 DNASE1L2Q92874 299 aa5.71□□□□□ -1.5
TUBGCP4-209ENST00000564511 SLC5A5Q92911 643 aa5.71□□□□□ -1.5
TUBGCP4-209ENST00000564511 KCNN1Q92952 543 aa5.71□□□□□ -1.5
TUBGCP4-209ENST00000564511 ELSPBP1Q96BH3 223 aa5.71□□□□□ -1.5
TUBGCP4-209ENST00000564511 CPB2Q96IY4 423 aa5.71□□□□□ -1.5
TUBGCP4-209ENST00000564511 KIF2CQ99661 725 aa5.71□□□□□ -1.5
TUBGCP4-209ENST00000564511 PAAF1Q9BRP4 392 aa5.71□□□□□ -1.5
TUBGCP4-209ENST00000564511 IER2Q9BTL4 223 aa5.71□□□□□ -1.5
TUBGCP4-209ENST00000564511 TRMT61BQ9BVS5 477 aaKnown RBP5.71□□□□□ -1.5
TUBGCP4-209ENST00000564511 ASPNQ9BXN1 380 aa5.71□□□□□ -1.5
TUBGCP4-209ENST00000564511 TRIM6Q9C030 488 aaPredicted RBP5.71□□□□□ -1.5
TUBGCP4-209ENST00000564511 ZMYND12Q9H0C1 365 aa5.71□□□□□ -1.5
TUBGCP4-209ENST00000564511 CSRNP2Q9H175 543 aa5.71□□□□□ -1.5
TUBGCP4-209ENST00000564511 CACNG4Q9UBN1 327 aa5.71□□□□□ -1.5
TUBGCP4-209ENST00000564511 VTI1BQ9UEU0 232 aa5.71□□□□□ -1.5
TUBGCP4-209ENST00000564511 NAP1L2Q9ULW6 460 aaPredicted RBP5.71□□□□□ -1.5
TUBGCP4-209ENST00000564511 GIT1Q9Y2X7 761 aa5.71□□□□□ -1.5
TUBGCP4-209ENST00000564511 PIAS3Q9Y6X2 628 aa5.71□□□□□ -1.5
TUBGCP4-209ENST00000564511 MIA3Q5JRA6 1907 aa5.71□□□□□ -1.5
TUBGCP4-209ENST00000564511 PATJQ8NI35 1801 aa5.71□□□□□ -1.5
TUBGCP4-209ENST00000564511 HELZ2Q9BYK8 2649 aaKnown RBP5.71□□□□□ -1.5
TUBGCP4-209ENST00000564511 SF3B1O75533 1304 aaKnown RBP eCLIP5.71□□□□□ -1.51e-6■■■■□ 25.8
TUBGCP4-209ENST00000564511 SMG1Q96Q15 3661 aaKnown RBP5.7□□□□□ -1.5
TUBGCP4-209ENST00000564511 DOCK8Q8NF50 2099 aa5.7□□□□□ -1.5
TUBGCP4-209ENST00000564511 ESYT2A0FGR8 921 aa5.7□□□□□ -1.5
TUBGCP4-209ENST00000564511 GOLGA8AA7E2F4 631 aa5.7□□□□□ -1.5
TUBGCP4-209ENST00000564511 GOLGA8BA8MQT2 603 aa5.7□□□□□ -1.5
TUBGCP4-209ENST00000564511 INO80B-WBP1J3KQ70 363 aa5.7□□□□□ -1.5
TUBGCP4-209ENST00000564511 SLC27A2O14975 620 aa5.7□□□□□ -1.5
TUBGCP4-209ENST00000564511 ASAP2O43150 1006 aa5.7□□□□□ -1.5
TUBGCP4-209ENST00000564511 TSPAN1O60635 241 aa5.7□□□□□ -1.5
TUBGCP4-209ENST00000564511 PSMD10O75832 226 aa5.7□□□□□ -1.5
TUBGCP4-209ENST00000564511 RHOP08100 348 aa5.7□□□□□ -1.5
TUBGCP4-209ENST00000564511 ZNF806P0C7X5 589 aa5.7□□□□□ -1.5
TUBGCP4-209ENST00000564511 CHRNB1P11230 501 aa5.7□□□□□ -1.5
TUBGCP4-209ENST00000564511 CEBPBP17676 345 aa5.7□□□□□ -1.5
TUBGCP4-209ENST00000564511 PTPN2P17706 415 aa5.7□□□□□ -1.5
TUBGCP4-209ENST00000564511 GLDCP23378 1020 aa5.7□□□□□ -1.5
TUBGCP4-209ENST00000564511 CCNE1P24864 410 aa5.7□□□□□ -1.5
TUBGCP4-209ENST00000564511 AXLP30530 894 aa5.7□□□□□ -1.5
TUBGCP4-209ENST00000564511 GDI1P31150 447 aa5.7□□□□□ -1.5
TUBGCP4-209ENST00000564511 PSMC5P62195 406 aa5.7□□□□□ -1.5
TUBGCP4-209ENST00000564511 GRIK3Q13003 919 aa5.7□□□□□ -1.5
TUBGCP4-209ENST00000564511 RAB33AQ14088 237 aa5.7□□□□□ -1.5
TUBGCP4-209ENST00000564511 NR0B2Q15466 257 aa5.7□□□□□ -1.5
TUBGCP4-209ENST00000564511 SLC5A9Q2M3M2 681 aa5.7□□□□□ -1.5
TUBGCP4-209ENST00000564511 FAM78AQ5JUQ0 283 aa5.7□□□□□ -1.5
TUBGCP4-209ENST00000564511 TTC22Q5TAA0 569 aa5.7□□□□□ -1.5
TUBGCP4-209ENST00000564511 LRSAM1Q6UWE0 723 aa5.7□□□□□ -1.5
TUBGCP4-209ENST00000564511 REC114Q7Z4M0 266 aa5.7□□□□□ -1.5
TUBGCP4-209ENST00000564511 CDR2LQ86X02 465 aaPredicted RBP5.7□□□□□ -1.5
TUBGCP4-209ENST00000564511 EXOC8Q8IYI6 725 aa5.7□□□□□ -1.5
TUBGCP4-209ENST00000564511 PHACTR4Q8IZ21 702 aa5.7□□□□□ -1.5
TUBGCP4-209ENST00000564511 LILRA2Q8N149 483 aa5.7□□□□□ -1.5
TUBGCP4-209ENST00000564511 SPEM1Q8N4L4 309 aa5.7□□□□□ -1.5
TUBGCP4-209ENST00000564511 OXR1Q8N573 874 aa5.7□□□□□ -1.5
TUBGCP4-209ENST00000564511 BICD2Q8TD16 824 aa5.7□□□□□ -1.5
TUBGCP4-209ENST00000564511 CCDC12Q8WUD4 166 aaPredicted RBP5.7□□□□□ -1.5
TUBGCP4-209ENST00000564511 CEP170P1Q96L14 293 aa5.7□□□□□ -1.5
TUBGCP4-209ENST00000564511 LSM14BQ9BX40 385 aaKnown RBP5.7□□□□□ -1.5
TUBGCP4-209ENST00000564511 SLKQ9H2G2 1235 aaPredicted RBP5.7□□□□□ -1.5
TUBGCP4-209ENST00000564511 NXF3Q9H4D5 531 aaKnown RBP5.7□□□□□ -1.5
TUBGCP4-209ENST00000564511 ZFP14Q9HCL3 533 aa5.7□□□□□ -1.5
TUBGCP4-209ENST00000564511 ZNF334Q9HCZ1 680 aaPredicted RBP5.7□□□□□ -1.5
TUBGCP4-209ENST00000564511 ZNF281Q9Y2X9 895 aa5.7□□□□□ -1.5
TUBGCP4-209ENST00000564511 MYH15Q9Y2K3 1946 aa5.7□□□□□ -1.5
TUBGCP4-209ENST00000564511 LOC400499M0QZD8 3231 aa5.69□□□□□ -1.5
TUBGCP4-209ENST00000564511 PTPN13Q12923 2485 aa5.69□□□□□ -1.5
TUBGCP4-209ENST00000564511 KLF18A0A0U1RQI7 1052 aa5.69□□□□□ -1.5
TUBGCP4-209ENST00000564511 FITM1A5D6W6 292 aa5.69□□□□□ -1.5
TUBGCP4-209ENST00000564511 CASTOR2A6NHX0 329 aa5.69□□□□□ -1.5
TUBGCP4-209ENST00000564511 SLC22A31A6NKX4 558 aa5.69□□□□□ -1.5
TUBGCP4-209ENST00000564511 SRRM3A6NNA2 597 aaPredicted RBP5.69□□□□□ -1.5
TUBGCP4-209ENST00000564511 K7ESF4 209 aa5.69□□□□□ -1.5
TUBGCP4-209ENST00000564511 RGS13O14921 159 aa5.69□□□□□ -1.5
TUBGCP4-209ENST00000564511 ZNF263O14978 683 aa5.69□□□□□ -1.5
TUBGCP4-209ENST00000564511 EDIL3O43854 480 aa5.69□□□□□ -1.5
TUBGCP4-209ENST00000564511 DKC1O60832 514 aaKnown RBP eCLIP5.69□□□□□ -1.5
TUBGCP4-209ENST00000564511 NPTXRO95502 500 aa5.69□□□□□ -1.5
TUBGCP4-209ENST00000564511 LRG1P02750 347 aa5.69□□□□□ -1.5
TUBGCP4-209ENST00000564511 POU2F2P09086 479 aa5.69□□□□□ -1.5
TUBGCP4-209ENST00000564511 PSMC3P17980 439 aa5.69□□□□□ -1.5
TUBGCP4-209ENST00000564511 FCARP24071 287 aa5.69□□□□□ -1.5
TUBGCP4-209ENST00000564511 HOXC13P31276 330 aa5.69□□□□□ -1.5
TUBGCP4-209ENST00000564511 ELF1P32519 619 aa5.69□□□□□ -1.5
TUBGCP4-209ENST00000564511 QARSP47897 775 aaKnown RBP5.69□□□□□ -1.5
TUBGCP4-209ENST00000564511 TUSC3Q13454 348 aa5.69□□□□□ -1.5
TUBGCP4-209ENST00000564511 LRRC32Q14392 662 aa5.69□□□□□ -1.5
TUBGCP4-209ENST00000564511 PCBP1Q15365 356 aaKnown RBP eCLIP5.69□□□□□ -1.5
TUBGCP4-209ENST00000564511 CREB3L3Q68CJ9 461 aa5.69□□□□□ -1.5
TUBGCP4-209ENST00000564511 PDXDC1Q6P996 788 aa5.69□□□□□ -1.5
TUBGCP4-209ENST00000564511 FBXL19Q6PCT2 694 aa5.69□□□□□ -1.5
TUBGCP4-209ENST00000564511 B3GNT9Q6UX72 402 aa5.69□□□□□ -1.5
TUBGCP4-209ENST00000564511 VITQ6UXI7 678 aa5.69□□□□□ -1.5
TUBGCP4-209ENST00000564511 RTL10Q7L3V2 364 aa5.69□□□□□ -1.5
TUBGCP4-209ENST00000564511 FERMT3Q86UX7 667 aa5.69□□□□□ -1.5
TUBGCP4-209ENST00000564511 CSGALNACT1Q8TDX6 532 aa5.69□□□□□ -1.5
TUBGCP4-209ENST00000564511 TCP11Q8WWU5 503 aa5.69□□□□□ -1.5
TUBGCP4-209ENST00000564511 TCEAL4Q96EI5 215 aa5.69□□□□□ -1.5
TUBGCP4-209ENST00000564511 CCDC51Q96ER9 411 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms