RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 EMILIN2Q9BXX0 1053 aa10.28□□□□□ -0.76
UBFD1-203ENST00000564106 PARVAQ9NVD7 372 aa10.28□□□□□ -0.76
UBFD1-203ENST00000564106 ADAM22Q9P0K1 906 aa10.28□□□□□ -0.76
UBFD1-203ENST00000564106 WDR35Q9P2L0 1181 aa10.28□□□□□ -0.76
UBFD1-203ENST00000564106 SORCS3Q9UPU3 1222 aa10.28□□□□□ -0.76
UBFD1-203ENST00000564106 WDR87Q6ZQQ6 2873 aa10.27□□□□□ -0.77
UBFD1-203ENST00000564106 PI15O43692 258 aa10.27□□□□□ -0.77
UBFD1-203ENST00000564106 BUB1BO60566 1050 aaPredicted RBP10.27□□□□□ -0.77
UBFD1-203ENST00000564106 TADA3O75528 432 aa10.27□□□□□ -0.77
UBFD1-203ENST00000564106 FTCDO95954 541 aa10.27□□□□□ -0.77
UBFD1-203ENST00000564106 GLUD1P00367 558 aa10.27□□□□□ -0.77
UBFD1-203ENST00000564106 SETSIPP0DME0 302 aa10.27□□□□□ -0.77
UBFD1-203ENST00000564106 BRD2P25440 801 aaKnown RBP10.27□□□□□ -0.77
UBFD1-203ENST00000564106 AVPR2P30518 371 aa10.27□□□□□ -0.77
UBFD1-203ENST00000564106 SLC1A1P43005 524 aa10.27□□□□□ -0.77
UBFD1-203ENST00000564106 RAP1GAPP47736 663 aa10.27□□□□□ -0.77
UBFD1-203ENST00000564106 CLCNKBP51801 687 aa10.27□□□□□ -0.77
UBFD1-203ENST00000564106 GUCY2FP51841 1108 aa10.27□□□□□ -0.77
UBFD1-203ENST00000564106 NDST1P52848 882 aa10.27□□□□□ -0.77
UBFD1-203ENST00000564106 GSCP56915 257 aaPredicted RBP10.27□□□□□ -0.77
UBFD1-203ENST00000564106 CNGA2Q16280 664 aa10.27□□□□□ -0.77
UBFD1-203ENST00000564106 ATAT1Q5SQI0 421 aa10.27□□□□□ -0.77
UBFD1-203ENST00000564106 FAM171A1Q5VUB5 890 aa10.27□□□□□ -0.77
UBFD1-203ENST00000564106 ZNF572Q7Z3I7 529 aaPredicted RBP10.27□□□□□ -0.77
UBFD1-203ENST00000564106 CMASQ8NFW8 434 aaPredicted RBP10.27□□□□□ -0.77
UBFD1-203ENST00000564106 IPO4Q8TEX9 1081 aaKnown RBP10.27□□□□□ -0.77
UBFD1-203ENST00000564106 CPA5Q8WXQ8 436 aa10.27□□□□□ -0.77
UBFD1-203ENST00000564106 ARHGEF26Q96DR7 871 aa10.27□□□□□ -0.77
UBFD1-203ENST00000564106 CYFIP2Q96F07 1278 aa10.27□□□□□ -0.77
UBFD1-203ENST00000564106 HEXIM2Q96MH2 286 aaKnown RBP10.27□□□□□ -0.77
UBFD1-203ENST00000564106 NAP1L3Q99457 506 aaPredicted RBP10.27□□□□□ -0.77
UBFD1-203ENST00000564106 COLEC11Q9BWP8 271 aa10.27□□□□□ -0.77
UBFD1-203ENST00000564106 SDCBP2Q9H190 292 aa10.27□□□□□ -0.77
UBFD1-203ENST00000564106 SNX25Q9H3E2 840 aa10.27□□□□□ -0.77
UBFD1-203ENST00000564106 KCNK12Q9HB15 430 aa10.27□□□□□ -0.77
UBFD1-203ENST00000564106 OSGEPQ9NPF4 335 aa10.27□□□□□ -0.77
UBFD1-203ENST00000564106 HESX1Q9UBX0 185 aa10.27□□□□□ -0.77
UBFD1-203ENST00000564106 FBXW11Q9UKB1 542 aa10.27□□□□□ -0.77
UBFD1-203ENST00000564106 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.27□□□□□ -0.77
UBFD1-203ENST00000564106 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.27□□□□□ -0.77
UBFD1-203ENST00000564106 NR2E1Q9Y466 385 aa10.27□□□□□ -0.77
UBFD1-203ENST00000564106 CLUHO75153 1309 aa10.27□□□□□ -0.77
UBFD1-203ENST00000564106 TSC2P49815 1807 aa10.26□□□□□ -0.77
UBFD1-203ENST00000564106 CCDC66A2RUB6 948 aa10.26□□□□□ -0.77
UBFD1-203ENST00000564106 A8MXQ7 604 aa10.26□□□□□ -0.77
UBFD1-203ENST00000564106 MYO1FO00160 1098 aa10.26□□□□□ -0.77
UBFD1-203ENST00000564106 ADH1AP07327 375 aa10.26□□□□□ -0.77
UBFD1-203ENST00000564106 TKTP29401 623 aaKnown RBP10.26□□□□□ -0.77
UBFD1-203ENST00000564106 CDH8P55286 799 aa10.26□□□□□ -0.77
UBFD1-203ENST00000564106 SLC8A3P57103 927 aa10.26□□□□□ -0.77
UBFD1-203ENST00000564106 LILRA4P59901 499 aa10.26□□□□□ -0.77
UBFD1-203ENST00000564106 MTMR3Q13615 1198 aa10.26□□□□□ -0.77
UBFD1-203ENST00000564106 USP41Q3LFD5 358 aa10.26□□□□□ -0.77
UBFD1-203ENST00000564106 PLEKHA7Q6IQ23 1121 aa10.26□□□□□ -0.77
UBFD1-203ENST00000564106 LCLAT1Q6UWP7 414 aa10.26□□□□□ -0.77
UBFD1-203ENST00000564106 CCDC149Q6ZUS6 474 aa10.26□□□□□ -0.77
UBFD1-203ENST00000564106 NT5DC3Q86UY8 548 aa10.26□□□□□ -0.77
UBFD1-203ENST00000564106 ERICH1Q86X53 443 aa10.26□□□□□ -0.77
UBFD1-203ENST00000564106 CEP57Q86XR8 500 aa10.26□□□□□ -0.77
UBFD1-203ENST00000564106 PASD1Q8IV76 773 aa10.26□□□□□ -0.77
UBFD1-203ENST00000564106 ADGRF2Q8IZF7 708 aa10.26□□□□□ -0.77
UBFD1-203ENST00000564106 GPR161Q8N6U8 529 aaKnown RBP10.26□□□□□ -0.77
UBFD1-203ENST00000564106 C3orf20Q8ND61 904 aa10.26□□□□□ -0.77
UBFD1-203ENST00000564106 WHAMMQ8TF30 809 aa10.26□□□□□ -0.77
UBFD1-203ENST00000564106 SMG7Q92540 1137 aaKnown RBP10.26□□□□□ -0.77
UBFD1-203ENST00000564106 HES6Q96HZ4 224 aa10.26□□□□□ -0.77
UBFD1-203ENST00000564106 C11orf70Q9BRQ4 267 aa10.26□□□□□ -0.77
UBFD1-203ENST00000564106 CARD9Q9H257 536 aa10.26□□□□□ -0.77
UBFD1-203ENST00000564106 SYNCQ9H7C4 482 aa10.26□□□□□ -0.77
UBFD1-203ENST00000564106 WDR6Q9NNW5 1121 aaKnown RBP10.26□□□□□ -0.77
UBFD1-203ENST00000564106 ABCB6Q9NP58 842 aa10.26□□□□□ -0.77
UBFD1-203ENST00000564106 HCFC1R1Q9NWW0 138 aa10.26□□□□□ -0.77
UBFD1-203ENST00000564106 ANAPC7Q9UJX3 599 aa10.26□□□□□ -0.77
UBFD1-203ENST00000564106 DSEQ9UL01 958 aa10.26□□□□□ -0.77
UBFD1-203ENST00000564106 CFAP54Q96N23 3096 aa10.26□□□□□ -0.77
UBFD1-203ENST00000564106 KRBA1A5PL33 1030 aa10.25□□□□□ -0.77
UBFD1-203ENST00000564106 H0Y858 1186 aa10.25□□□□□ -0.77
UBFD1-203ENST00000564106 M0QYV0 167 aa10.25□□□□□ -0.77
UBFD1-203ENST00000564106 O00370 1275 aa10.25□□□□□ -0.77
UBFD1-203ENST00000564106 PODXLO00592 558 aa10.25□□□□□ -0.77
UBFD1-203ENST00000564106 KCNK3O14649 394 aa10.25□□□□□ -0.77
UBFD1-203ENST00000564106 SPOPO43791 374 aa10.25□□□□□ -0.77
UBFD1-203ENST00000564106 TADA2AO75478 443 aa10.25□□□□□ -0.77
UBFD1-203ENST00000564106 ODC1P11926 461 aa10.25□□□□□ -0.77
UBFD1-203ENST00000564106 DESP17661 470 aa10.25□□□□□ -0.77
UBFD1-203ENST00000564106 FGFR3P22607 806 aa10.25□□□□□ -0.77
UBFD1-203ENST00000564106 WARSP23381 471 aaKnown RBP10.25□□□□□ -0.77
UBFD1-203ENST00000564106 RRM1P23921 792 aa10.25□□□□□ -0.77
UBFD1-203ENST00000564106 MCM3P25205 808 aa10.25□□□□□ -0.77
UBFD1-203ENST00000564106 MAN1A1P33908 653 aa10.25□□□□□ -0.77
UBFD1-203ENST00000564106 LHX1P48742 406 aa10.25□□□□□ -0.77
UBFD1-203ENST00000564106 MESDQ14696 234 aa10.25□□□□□ -0.77
UBFD1-203ENST00000564106 PSMD5Q16401 504 aa10.25□□□□□ -0.77
UBFD1-203ENST00000564106 UPP1Q16831 310 aa10.25□□□□□ -0.77
UBFD1-203ENST00000564106 SOWAHAQ2M3V2 549 aa10.25□□□□□ -0.77
UBFD1-203ENST00000564106 ARHGAP17Q68EM7 881 aa10.25□□□□□ -0.77
UBFD1-203ENST00000564106 SCARA3Q6AZY7 606 aa10.25□□□□□ -0.77
UBFD1-203ENST00000564106 DNAJC24Q6P3W2 148 aa10.25□□□□□ -0.77
UBFD1-203ENST00000564106 MMS22LQ6ZRQ5 1243 aa10.25□□□□□ -0.77
UBFD1-203ENST00000564106 GET4Q7L5D6 327 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms