RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 ATP2A3Q93084 1043 aa20.98■□□□□ 0.95
CMTM3-207ENST00000564060 CNOT6LQ96LI5 555 aaKnown RBP20.98■□□□□ 0.95
CMTM3-207ENST00000564060 DUS2Q9NX74 493 aaKnown RBP20.98■□□□□ 0.95
CMTM3-207ENST00000564060 KIAA1257Q9ULG3 409 aa20.98■□□□□ 0.95
CMTM3-207ENST00000564060 MTF2Q9Y483 593 aaPredicted RBP20.98■□□□□ 0.95
CMTM3-207ENST00000564060 FANCMQ8IYD8 2048 aa20.97■□□□□ 0.95
CMTM3-207ENST00000564060 SHISA7A6NL88 538 aa20.97■□□□□ 0.95
CMTM3-207ENST00000564060 ZDHHC11BP0C7U3 371 aa20.97■□□□□ 0.95
CMTM3-207ENST00000564060 MBL2P11226 248 aaPredicted RBP20.97■□□□□ 0.95
CMTM3-207ENST00000564060 ERCC5P28715 1186 aaPredicted RBP20.97■□□□□ 0.95
CMTM3-207ENST00000564060 GCNT1Q02742 428 aa20.97■□□□□ 0.95
CMTM3-207ENST00000564060 TNK2Q07912 1038 aa20.97■□□□□ 0.95
CMTM3-207ENST00000564060 CREBRFQ8IUR6 639 aa20.97■□□□□ 0.95
CMTM3-207ENST00000564060 JAKMIP2Q96AA8 810 aa20.97■□□□□ 0.95
CMTM3-207ENST00000564060 NACA2Q9H009 215 aa20.97■□□□□ 0.95
CMTM3-207ENST00000564060 EBF3Q9H4W6 596 aa20.97■□□□□ 0.95
CMTM3-207ENST00000564060 SPATA6Q9NWH7 488 aaPredicted RBP20.97■□□□□ 0.95
CMTM3-207ENST00000564060 GMIPQ9P107 970 aa20.97■□□□□ 0.95
CMTM3-207ENST00000564060 HESX1Q9UBX0 185 aa20.97■□□□□ 0.95
CMTM3-207ENST00000564060 CHORDC1Q9UHD1 332 aaPredicted RBP20.97■□□□□ 0.95
CMTM3-207ENST00000564060 SCML2Q9UQR0 700 aa20.97■□□□□ 0.95
CMTM3-207ENST00000564060 CPQQ9Y646 472 aa20.97■□□□□ 0.95
CMTM3-207ENST00000564060 CACNA1IQ9P0X4 2223 aa20.97■□□□□ 0.95
CMTM3-207ENST00000564060 CACNA1HO95180 2353 aa20.96■□□□□ 0.95
CMTM3-207ENST00000564060 LEFTY2O00292 366 aa20.96■□□□□ 0.95
CMTM3-207ENST00000564060 SLC9A3R1O14745 358 aaPredicted RBP20.96■□□□□ 0.95
CMTM3-207ENST00000564060 LAMTOR5O43504 91 aa20.96■□□□□ 0.95
CMTM3-207ENST00000564060 VDRP11473 427 aa20.96■□□□□ 0.95
CMTM3-207ENST00000564060 ACO1P21399 889 aaKnown RBP20.96■□□□□ 0.95
CMTM3-207ENST00000564060 PSEN1P49768 467 aa20.96■□□□□ 0.95
CMTM3-207ENST00000564060 NR1H3Q13133 447 aa20.96■□□□□ 0.95
CMTM3-207ENST00000564060 DPCR1Q3MIW9 517 aa20.96■□□□□ 0.95
CMTM3-207ENST00000564060 ANKRD52Q8NB46 1076 aa20.96■□□□□ 0.95
CMTM3-207ENST00000564060 EHBP1Q8NDI1 1231 aa20.96■□□□□ 0.95
CMTM3-207ENST00000564060 FAM81BQ96LP2 452 aa20.96■□□□□ 0.95
CMTM3-207ENST00000564060 UBXN6Q9BZV1 441 aa20.96■□□□□ 0.95
CMTM3-207ENST00000564060 RNF38Q9H0F5 515 aa20.96■□□□□ 0.95
CMTM3-207ENST00000564060 THAP9Q9H5L6 903 aa20.96■□□□□ 0.95
CMTM3-207ENST00000564060 HPS4Q9NQG7 708 aa20.96■□□□□ 0.95
CMTM3-207ENST00000564060 HHLA1C9JL84 531 aa20.95■□□□□ 0.94
CMTM3-207ENST00000564060 NFATC1O95644 943 aa20.95■□□□□ 0.94
CMTM3-207ENST00000564060 PAEPP09466 180 aa20.95■□□□□ 0.94
CMTM3-207ENST00000564060 CD19P15391 556 aa20.95■□□□□ 0.94
CMTM3-207ENST00000564060 SOX9P48436 509 aa20.95■□□□□ 0.94
CMTM3-207ENST00000564060 BCAT1P54687 386 aa20.95■□□□□ 0.94
CMTM3-207ENST00000564060 PPP2R5DQ14738 602 aa20.95■□□□□ 0.94
CMTM3-207ENST00000564060 DGKKQ5KSL6 1271 aa20.95■□□□□ 0.94
CMTM3-207ENST00000564060 TRIM68Q6AZZ1 485 aa20.95■□□□□ 0.94
CMTM3-207ENST00000564060 UBR7Q8N806 425 aa20.95■□□□□ 0.94
CMTM3-207ENST00000564060 TTC8Q8TAM2 541 aa20.95■□□□□ 0.94
CMTM3-207ENST00000564060 LMO3Q8TAP4 145 aa20.95■□□□□ 0.94
CMTM3-207ENST00000564060 RIN3Q8TB24 985 aa20.95■□□□□ 0.94
CMTM3-207ENST00000564060 CHRDQ9H2X0 955 aa20.95■□□□□ 0.94
CMTM3-207ENST00000564060 PCDHB4Q9Y5E5 795 aa20.95■□□□□ 0.94
CMTM3-207ENST00000564060 COCHO43405 550 aa20.94■□□□□ 0.94
CMTM3-207ENST00000564060 TLR5O60602 858 aa20.94■□□□□ 0.94
CMTM3-207ENST00000564060 MBD3O95983 291 aa20.94■□□□□ 0.94
CMTM3-207ENST00000564060 PRKCSHP14314 528 aaPredicted RBP20.94■□□□□ 0.94
CMTM3-207ENST00000564060 MTIF2P46199 727 aaKnown RBP20.94■□□□□ 0.94
CMTM3-207ENST00000564060 KIF11P52732 1056 aa20.94■□□□□ 0.94
CMTM3-207ENST00000564060 GOLGA8FQ08AF8 430 aa20.94■□□□□ 0.94
CMTM3-207ENST00000564060 GOLGA8DPQ0D2H9 430 aa20.94■□□□□ 0.94
CMTM3-207ENST00000564060 STILQ15468 1287 aa20.94■□□□□ 0.94
CMTM3-207ENST00000564060 EML3Q32P44 896 aa20.94■□□□□ 0.94
CMTM3-207ENST00000564060 TMEM270Q6UE05 265 aa20.94■□□□□ 0.94
CMTM3-207ENST00000564060 GPRIN1Q7Z2K8 1008 aa20.94■□□□□ 0.94
CMTM3-207ENST00000564060 CCDC186Q7Z3E2 898 aa20.94■□□□□ 0.94
CMTM3-207ENST00000564060 TADA2BQ86TJ2 420 aa20.94■□□□□ 0.94
CMTM3-207ENST00000564060 ZNF687Q8N1G0 1237 aa20.94■□□□□ 0.94
CMTM3-207ENST00000564060 CDK5RAP1Q96SZ6 601 aaKnown RBP20.94■□□□□ 0.94
CMTM3-207ENST00000564060 ECT2Q9H8V3 914 aa20.94■□□□□ 0.94
CMTM3-207ENST00000564060 LMAN1LQ9HAT1 526 aa20.94■□□□□ 0.94
CMTM3-207ENST00000564060 SMPD4Q9NXE4 827 aa20.94■□□□□ 0.94
CMTM3-207ENST00000564060 TBC1D14Q9P2M4 693 aa20.94■□□□□ 0.94
CMTM3-207ENST00000564060 TSPAN16Q9UKR8 245 aa20.94■□□□□ 0.94
CMTM3-207ENST00000564060 FBXO4Q9UKT5 387 aa20.94■□□□□ 0.94
CMTM3-207ENST00000564060 WNT6Q9Y6F9 365 aa20.94■□□□□ 0.94
CMTM3-207ENST00000564060 CHRNB1P11230 501 aa20.93■□□□□ 0.94
CMTM3-207ENST00000564060 ARSAP15289 507 aa20.93■□□□□ 0.94
CMTM3-207ENST00000564060 FZD5Q13467 585 aa20.93■□□□□ 0.94
CMTM3-207ENST00000564060 GOLGA7BQ2TAP0 167 aa20.93■□□□□ 0.94
CMTM3-207ENST00000564060 ZC3H14Q6PJT7 736 aaKnown RBP20.93■□□□□ 0.94
CMTM3-207ENST00000564060 ENOSF1Q7L5Y1 443 aa20.93■□□□□ 0.94
CMTM3-207ENST00000564060 ARHGAP18Q8N392 663 aa20.93■□□□□ 0.94
CMTM3-207ENST00000564060 SYNPOQ8N3V7 929 aa20.93■□□□□ 0.94
CMTM3-207ENST00000564060 INTS2Q9H0H0 1204 aaKnown RBP20.93■□□□□ 0.94
CMTM3-207ENST00000564060 CCSER2Q9H7U1 834 aa20.93■□□□□ 0.94
CMTM3-207ENST00000564060 CYLDQ9NQC7 956 aa20.93■□□□□ 0.94
CMTM3-207ENST00000564060 SH3BP1Q9Y3L3 701 aa20.93■□□□□ 0.94
CMTM3-207ENST00000564060 USP3Q9Y6I4 520 aa20.93■□□□□ 0.94
CMTM3-207ENST00000564060 GTPBP10A4D1E9 387 aaKnown RBP20.92■□□□□ 0.94
CMTM3-207ENST00000564060 XPO1O14980 1071 aaKnown RBP20.92■□□□□ 0.94
CMTM3-207ENST00000564060 CYP26A1O43174 497 aa20.92■□□□□ 0.94
CMTM3-207ENST00000564060 SETSIPP0DME0 302 aa20.92■□□□□ 0.94
CMTM3-207ENST00000564060 ATP5C1P36542 298 aaKnown RBP20.92■□□□□ 0.94
CMTM3-207ENST00000564060 NBL1P41271 181 aa20.92■□□□□ 0.94
CMTM3-207ENST00000564060 BST2Q10589 180 aaKnown RBP20.92■□□□□ 0.94
CMTM3-207ENST00000564060 GRSF1Q12849 480 aaKnown RBP eCLIP20.92■□□□□ 0.94
CMTM3-207ENST00000564060 PON2Q15165 354 aa20.92■□□□□ 0.94
CMTM3-207ENST00000564060 KLHDC10Q6PID8 442 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms