RNA–Protein interactions for RNA: ENST00000563995.1

SLX1A-204, Transcript of SLX1 homolog A, structure-specific endonuclease subunit, humanhuman

TSL 3

Gene SLX1A, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX1A-204ENST00000563995 PARM1Q6UWI2 310 aa20.6■□□□□ 0.89
SLX1A-204ENST00000563995 DENND5BQ6ZUT9 1274 aa20.6■□□□□ 0.89
SLX1A-204ENST00000563995 MAML2Q8IZL2 1156 aaPredicted RBP20.6■□□□□ 0.89
SLX1A-204ENST00000563995 NEK11Q8NG66 645 aa20.6■□□□□ 0.89
SLX1A-204ENST00000563995 TFAP2BQ92481 460 aa20.6■□□□□ 0.89
SLX1A-204ENST00000563995 TCEAL4Q96EI5 215 aa20.6■□□□□ 0.89
SLX1A-204ENST00000563995 TRMT2BQ96GJ1 504 aaKnown RBP20.6■□□□□ 0.89
SLX1A-204ENST00000563995 MYRFLQ96LU7 910 aa20.6■□□□□ 0.89
SLX1A-204ENST00000563995 DUSP16Q9BY84 665 aa20.6■□□□□ 0.89
SLX1A-204ENST00000563995 GPR88Q9GZN0 384 aa20.6■□□□□ 0.89
SLX1A-204ENST00000563995 TSPAN16Q9UKR8 245 aa20.6■□□□□ 0.89
SLX1A-204ENST00000563995 CDH7Q9ULB5 785 aa20.6■□□□□ 0.89
SLX1A-204ENST00000563995 MAGED2Q9UNF1 606 aaPredicted RBP20.6■□□□□ 0.89
SLX1A-204ENST00000563995 FOXN3O00409 490 aaPredicted RBP20.59■□□□□ 0.89
SLX1A-204ENST00000563995 MOSPD3O75425 235 aa20.59■□□□□ 0.89
SLX1A-204ENST00000563995 MICAL2O94851 1124 aa20.59■□□□□ 0.89
SLX1A-204ENST00000563995 BRD2P25440 801 aaKnown RBP20.59■□□□□ 0.89
SLX1A-204ENST00000563995 USP8P40818 1118 aa20.59■□□□□ 0.89
SLX1A-204ENST00000563995 UBASH3AP57075 661 aa20.59■□□□□ 0.89
SLX1A-204ENST00000563995 POLR2FP61218 127 aaKnown RBP20.59■□□□□ 0.89
SLX1A-204ENST00000563995 GPC5P78333 572 aa20.59■□□□□ 0.89
SLX1A-204ENST00000563995 STILQ15468 1287 aa20.59■□□□□ 0.89
SLX1A-204ENST00000563995 GOLGA7BQ2TAP0 167 aa20.59■□□□□ 0.89
SLX1A-204ENST00000563995 ANKRD52Q8NB46 1076 aa20.59■□□□□ 0.89
SLX1A-204ENST00000563995 ZSWIM1Q9BR11 485 aa20.59■□□□□ 0.89
SLX1A-204ENST00000563995 STK33Q9BYT3 514 aa20.59■□□□□ 0.89
SLX1A-204ENST00000563995 IL21Q9HBE4 155 aa20.59■□□□□ 0.89
SLX1A-204ENST00000563995 UXTQ9UBK9 157 aaPredicted RBP20.59■□□□□ 0.89
SLX1A-204ENST00000563995 A0A1W2PQC6 194 aa20.58■□□□□ 0.89
SLX1A-204ENST00000563995 NRG2O14511 850 aaPredicted RBP20.58■□□□□ 0.89
SLX1A-204ENST00000563995 CALCAP01258 141 aa20.58■□□□□ 0.89
SLX1A-204ENST00000563995 PNMA6AP0CW24 399 aaPredicted RBP20.58■□□□□ 0.89
SLX1A-204ENST00000563995 CEBPBP17676 345 aa20.58■□□□□ 0.89
SLX1A-204ENST00000563995 GABRR2P28476 465 aa20.58■□□□□ 0.89
SLX1A-204ENST00000563995 CNGA2Q16280 664 aa20.58■□□□□ 0.89
SLX1A-204ENST00000563995 LCLAT1Q6UWP7 414 aa20.58■□□□□ 0.89
SLX1A-204ENST00000563995 GAREM2Q75VX8 874 aa20.58■□□□□ 0.89
SLX1A-204ENST00000563995 TTC30AQ86WT1 665 aa20.58■□□□□ 0.89
SLX1A-204ENST00000563995 FAM71AQ8IYT1 594 aa20.58■□□□□ 0.89
SLX1A-204ENST00000563995 NUP93Q8N1F7 819 aa20.58■□□□□ 0.89
SLX1A-204ENST00000563995 SHKBP1Q8TBC3 707 aa20.58■□□□□ 0.89
SLX1A-204ENST00000563995 ING5Q8WYH8 240 aa20.58■□□□□ 0.89
SLX1A-204ENST00000563995 DDX23Q9BUQ8 820 aaKnown RBP20.58■□□□□ 0.89
SLX1A-204ENST00000563995 TTLL2Q9BWV7 592 aa20.58■□□□□ 0.89
SLX1A-204ENST00000563995 PNPLA8Q9NP80 782 aa20.58■□□□□ 0.89
SLX1A-204ENST00000563995 EHD2Q9NZN4 543 aa20.58■□□□□ 0.89
SLX1A-204ENST00000563995 HESX1Q9UBX0 185 aa20.58■□□□□ 0.89
SLX1A-204ENST00000563995 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.58■□□□□ 0.89
SLX1A-204ENST00000563995 CFAP47Q6ZTR5 3102 aa20.58■□□□□ 0.88
SLX1A-204ENST00000563995 GPR179Q6PRD1 2367 aa20.58■□□□□ 0.88
SLX1A-204ENST00000563995 CHD8Q9HCK8 2581 aa20.57■□□□□ 0.88
SLX1A-204ENST00000563995 A0A1W2PRU2 124 aa20.57■□□□□ 0.88
SLX1A-204ENST00000563995 HHLA1C9JL84 531 aa20.57■□□□□ 0.88
SLX1A-204ENST00000563995 F8VZ95 297 aa20.57■□□□□ 0.88
SLX1A-204ENST00000563995 TNFRSF10BO14763 440 aa20.57■□□□□ 0.88
SLX1A-204ENST00000563995 CYP26A1O43174 497 aa20.57■□□□□ 0.88
SLX1A-204ENST00000563995 SDHBP21912 280 aa20.57■□□□□ 0.88
SLX1A-204ENST00000563995 CDC25CP30307 473 aa20.57■□□□□ 0.88
SLX1A-204ENST00000563995 GNA15P30679 374 aa20.57■□□□□ 0.88
SLX1A-204ENST00000563995 SLC5A3P53794 718 aa20.57■□□□□ 0.88
SLX1A-204ENST00000563995 BCAT1P54687 386 aa20.57■□□□□ 0.88
SLX1A-204ENST00000563995 USP46P62068 366 aa20.57■□□□□ 0.88
SLX1A-204ENST00000563995 NPAS3Q8IXF0 933 aa20.57■□□□□ 0.88
SLX1A-204ENST00000563995 FGF13Q92913 245 aa20.57■□□□□ 0.88
SLX1A-204ENST00000563995 SHDQ96IW2 340 aa20.57■□□□□ 0.88
SLX1A-204ENST00000563995 GCNAQ96QF7 691 aa20.57■□□□□ 0.88
SLX1A-204ENST00000563995 NLRC4Q9NPP4 1024 aa20.57■□□□□ 0.88
SLX1A-204ENST00000563995 GREB1Q4ZG55 1949 aa20.57■□□□□ 0.88
SLX1A-204ENST00000563995 FRYLO94915 3013 aa20.56■□□□□ 0.88
SLX1A-204ENST00000563995 CHD6Q8TD26 2715 aa20.56■□□□□ 0.88
SLX1A-204ENST00000563995 COL4A2P08572 1712 aa20.56■□□□□ 0.88
SLX1A-204ENST00000563995 SPTBN2O15020 2390 aa20.56■□□□□ 0.88
SLX1A-204ENST00000563995 KANSL1LA0AUZ9 987 aa20.56■□□□□ 0.88
SLX1A-204ENST00000563995 MED7O43513 233 aa20.56■□□□□ 0.88
SLX1A-204ENST00000563995 RTN3O95197 1032 aaPredicted RBP20.56■□□□□ 0.88
SLX1A-204ENST00000563995 F11P03951 625 aa20.56■□□□□ 0.88
SLX1A-204ENST00000563995 GJA1P17302 382 aa20.56■□□□□ 0.88
SLX1A-204ENST00000563995 CLCN1P35523 988 aa20.56■□□□□ 0.88
SLX1A-204ENST00000563995 JAM2P57087 298 aa20.56■□□□□ 0.88
SLX1A-204ENST00000563995 SLC8A3P57103 927 aa20.56■□□□□ 0.88
SLX1A-204ENST00000563995 BST2Q10589 180 aaKnown RBP20.56■□□□□ 0.88
SLX1A-204ENST00000563995 TEAD2Q15562 447 aa20.56■□□□□ 0.88
SLX1A-204ENST00000563995 MLF2Q15773 248 aaPredicted RBP20.56■□□□□ 0.88
SLX1A-204ENST00000563995 PKDCCQ504Y2 493 aa20.56■□□□□ 0.88
SLX1A-204ENST00000563995 TMEM150AQ86TG1 271 aa20.56■□□□□ 0.88
SLX1A-204ENST00000563995 SUMF1Q8NBK3 374 aa20.56■□□□□ 0.88
SLX1A-204ENST00000563995 UBXN6Q9BZV1 441 aa20.56■□□□□ 0.88
SLX1A-204ENST00000563995 ATXN3LQ9H3M9 355 aa20.56■□□□□ 0.88
SLX1A-204ENST00000563995 ACP6Q9NPH0 428 aa20.56■□□□□ 0.88
SLX1A-204ENST00000563995 COMMD8Q9NX08 183 aa20.56■□□□□ 0.88
SLX1A-204ENST00000563995 IL37Q9NZH6 218 aa20.56■□□□□ 0.88
SLX1A-204ENST00000563995 IFNKQ9P0W0 207 aa20.56■□□□□ 0.88
SLX1A-204ENST00000563995 RALYQ9UKM9 306 aaKnown RBP20.56■□□□□ 0.88
SLX1A-204ENST00000563995 M0QYV0 167 aa20.55■□□□□ 0.88
SLX1A-204ENST00000563995 XPO1O14980 1071 aaKnown RBP20.55■□□□□ 0.88
SLX1A-204ENST00000563995 THAP12O43422 761 aa20.55■□□□□ 0.88
SLX1A-204ENST00000563995 TADA3O75528 432 aa20.55■□□□□ 0.88
SLX1A-204ENST00000563995 SETSIPP0DME0 302 aa20.55■□□□□ 0.88
SLX1A-204ENST00000563995 ATXN1P54253 815 aaKnown RBP20.55■□□□□ 0.88
SLX1A-204ENST00000563995 PTK2Q05397 1052 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms