RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 SMOQ99835 787 aa18.73■□□□□ 0.59
NME3-205ENST00000563854 NIF3L1Q9GZT8 377 aa18.73■□□□□ 0.59
NME3-205ENST00000563854 NACA2Q9H009 215 aa18.73■□□□□ 0.59
NME3-205ENST00000563854 TMEM8AQ9HCN3 771 aa18.73■□□□□ 0.59
NME3-205ENST00000563854 ZNF292O60281 2723 aa18.73■□□□□ 0.59
NME3-205ENST00000563854 OTOGLQ3ZCN5 2332 aa18.73■□□□□ 0.59
NME3-205ENST00000563854 CETN3O15182 167 aa18.72■□□□□ 0.59
NME3-205ENST00000563854 BEST1O76090 585 aa18.72■□□□□ 0.59
NME3-205ENST00000563854 OLFM2O95897 454 aa18.72■□□□□ 0.59
NME3-205ENST00000563854 FAM200BP0CF97 657 aa18.72■□□□□ 0.59
NME3-205ENST00000563854 IRF1P10914 325 aa18.72■□□□□ 0.59
NME3-205ENST00000563854 SEC13P55735 322 aa18.72■□□□□ 0.59
NME3-205ENST00000563854 EDRF1Q3B7T1 1238 aa18.72■□□□□ 0.59
NME3-205ENST00000563854 DCAF17Q5H9S7 520 aaPredicted RBP18.72■□□□□ 0.59
NME3-205ENST00000563854 HECTD3Q5T447 861 aa18.72■□□□□ 0.59
NME3-205ENST00000563854 TCERG1LQ5VWI1 586 aa18.72■□□□□ 0.59
NME3-205ENST00000563854 LAIR1Q6GTX8 287 aa18.72■□□□□ 0.59
NME3-205ENST00000563854 DDX42Q86XP3 938 aaKnown RBP eCLIP18.72■□□□□ 0.59
NME3-205ENST00000563854 CRYBG2Q8N1P7 616 aa18.72■□□□□ 0.59
NME3-205ENST00000563854 ZMIZ2Q8NF64 920 aa18.72■□□□□ 0.59
NME3-205ENST00000563854 OVCA2Q8WZ82 227 aa18.72■□□□□ 0.59
NME3-205ENST00000563854 HHIPQ96QV1 700 aa18.72■□□□□ 0.59
NME3-205ENST00000563854 TSG101Q99816 390 aa18.72■□□□□ 0.59
NME3-205ENST00000563854 CCSER2Q9H7U1 834 aa18.72■□□□□ 0.59
NME3-205ENST00000563854 GPR179Q6PRD1 2367 aa18.72■□□□□ 0.59
NME3-205ENST00000563854 TNFRSF10BO14763 440 aa18.71■□□□□ 0.59
NME3-205ENST00000563854 SMC2O95347 1197 aa18.71■□□□□ 0.59
NME3-205ENST00000563854 CYP17A1P05093 508 aa18.71■□□□□ 0.59
NME3-205ENST00000563854 PRCPP42785 496 aa18.71■□□□□ 0.59
NME3-205ENST00000563854 MXI1P50539 228 aa18.71■□□□□ 0.59
NME3-205ENST00000563854 FBXO43Q4G163 708 aa18.71■□□□□ 0.59
NME3-205ENST00000563854 ZNF394Q53GI3 561 aa18.71■□□□□ 0.59
NME3-205ENST00000563854 WDR5BQ86VZ2 330 aa18.71■□□□□ 0.59
NME3-205ENST00000563854 EZH1Q92800 747 aaPredicted RBP18.71■□□□□ 0.59
NME3-205ENST00000563854 SMARCE1Q969G3 411 aa18.71■□□□□ 0.59
NME3-205ENST00000563854 NT5C1AQ9BXI3 368 aa18.71■□□□□ 0.59
NME3-205ENST00000563854 CYP3A43Q9HB55 503 aa18.71■□□□□ 0.59
NME3-205ENST00000563854 SH3BP1Q9Y3L3 701 aa18.71■□□□□ 0.59
NME3-205ENST00000563854 SLC9A3R1O14745 358 aaPredicted RBP18.7■□□□□ 0.58
NME3-205ENST00000563854 CNR2P34972 360 aa18.7■□□□□ 0.58
NME3-205ENST00000563854 SPEM2Q0P670 501 aa18.7■□□□□ 0.58
NME3-205ENST00000563854 INCA1Q0VD86 236 aa18.7■□□□□ 0.58
NME3-205ENST00000563854 ZNF658Q5TYW1 1059 aaPredicted RBP18.7■□□□□ 0.58
NME3-205ENST00000563854 KRT39Q6A163 491 aa18.7■□□□□ 0.58
NME3-205ENST00000563854 GPRIN1Q7Z2K8 1008 aa18.7■□□□□ 0.58
NME3-205ENST00000563854 CYFIP2Q96F07 1278 aa18.7■□□□□ 0.58
NME3-205ENST00000563854 MYO16Q9Y6X6 1858 aa18.7■□□□□ 0.58
NME3-205ENST00000563854 DMXL1Q9Y485 3027 aa18.7■□□□□ 0.58
NME3-205ENST00000563854 ATG2BQ96BY7 2078 aa18.69■□□□□ 0.58
NME3-205ENST00000563854 STX10O60499 249 aa18.69■□□□□ 0.58
NME3-205ENST00000563854 CCDC192P0DO97 292 aa18.69■□□□□ 0.58
NME3-205ENST00000563854 OPRD1P41143 372 aa18.69■□□□□ 0.58
NME3-205ENST00000563854 DHCR24Q15392 516 aa18.69■□□□□ 0.58
NME3-205ENST00000563854 ISM2Q6H9L7 571 aa18.69■□□□□ 0.58
NME3-205ENST00000563854 CLEC20AQ6ZU45 233 aa18.69■□□□□ 0.58
NME3-205ENST00000563854 GPR161Q8N6U8 529 aaKnown RBP18.69■□□□□ 0.58
NME3-205ENST00000563854 SEMA4DQ92854 862 aa18.69■□□□□ 0.58
NME3-205ENST00000563854 ACDQ96AP0 544 aa18.69■□□□□ 0.58
NME3-205ENST00000563854 GSDMAQ96QA5 445 aa18.69■□□□□ 0.58
NME3-205ENST00000563854 DNAI2Q9GZS0 605 aa18.69■□□□□ 0.58
NME3-205ENST00000563854 FBXO44Q9H4M3 255 aa18.69■□□□□ 0.58
NME3-205ENST00000563854 CSNK1G1Q9HCP0 422 aa18.69■□□□□ 0.58
NME3-205ENST00000563854 PARD6AQ9NPB6 346 aa18.69■□□□□ 0.58
NME3-205ENST00000563854 TLR8Q9NR97 1041 aaKnown RBP18.69■□□□□ 0.58
NME3-205ENST00000563854 COMMD8Q9NX08 183 aa18.69■□□□□ 0.58
NME3-205ENST00000563854 HOOK1Q9UJC3 728 aaKnown RBP18.69■□□□□ 0.58
NME3-205ENST00000563854 PCDHA5Q9Y5H7 936 aa18.69■□□□□ 0.58
NME3-205ENST00000563854 MYH10P35580 1976 aa18.69■□□□□ 0.58
NME3-205ENST00000563854 TRIM49BA6NDI0 452 aa18.68■□□□□ 0.58
NME3-205ENST00000563854 CYP26A1O43174 497 aa18.68■□□□□ 0.58
NME3-205ENST00000563854 TLR5O60602 858 aa18.68■□□□□ 0.58
NME3-205ENST00000563854 CILPO75339 1184 aa18.68■□□□□ 0.58
NME3-205ENST00000563854 ADH1CP00326 375 aa18.68■□□□□ 0.58
NME3-205ENST00000563854 ADH5P11766 374 aa18.68■□□□□ 0.58
NME3-205ENST00000563854 ACO1P21399 889 aaKnown RBP18.68■□□□□ 0.58
NME3-205ENST00000563854 GTF2H1P32780 548 aa18.68■□□□□ 0.58
NME3-205ENST00000563854 PGFP49763 221 aa18.68■□□□□ 0.58
NME3-205ENST00000563854 KDSRQ06136 332 aa18.68■□□□□ 0.58
NME3-205ENST00000563854 ENPEPQ07075 957 aa18.68■□□□□ 0.58
NME3-205ENST00000563854 DMC1Q14565 340 aa18.68■□□□□ 0.58
NME3-205ENST00000563854 RSPO4Q2I0M5 234 aaPredicted RBP18.68■□□□□ 0.58
NME3-205ENST00000563854 C2orf27AQ580R0 203 aa18.68■□□□□ 0.58
NME3-205ENST00000563854 FBXL13Q8NEE6 735 aa18.68■□□□□ 0.58
NME3-205ENST00000563854 ENGASEQ8NFI3 743 aa18.68■□□□□ 0.58
NME3-205ENST00000563854 WHAMMQ8TF30 809 aa18.68■□□□□ 0.58
NME3-205ENST00000563854 ZFRQ96KR1 1074 aaKnown RBP18.68■□□□□ 0.58
NME3-205ENST00000563854 HNRNPABQ99729 332 aaKnown RBP18.68■□□□□ 0.58
NME3-205ENST00000563854 RAB20Q9NX57 234 aa18.68■□□□□ 0.58
NME3-205ENST00000563854 IL37Q9NZH6 218 aa18.68■□□□□ 0.58
NME3-205ENST00000563854 DCHS1Q96JQ0 3298 aa18.67■□□□□ 0.58
NME3-205ENST00000563854 E2F8A0AVK6 867 aa18.67■□□□□ 0.58
NME3-205ENST00000563854 RPP40O75818 363 aaKnown RBP18.67■□□□□ 0.58
NME3-205ENST00000563854 RETP07949 1114 aa18.67■□□□□ 0.58
NME3-205ENST00000563854 HOXA6P31267 233 aa18.67■□□□□ 0.58
NME3-205ENST00000563854 SLC6A11P48066 632 aa18.67■□□□□ 0.58
NME3-205ENST00000563854 TUBP50607 506 aa18.67■□□□□ 0.58
NME3-205ENST00000563854 PMS1P54277 932 aaKnown RBP18.67■□□□□ 0.58
NME3-205ENST00000563854 GAB4Q2WGN9 574 aa18.67■□□□□ 0.58
NME3-205ENST00000563854 ANKRD40Q6AI12 368 aa18.67■□□□□ 0.58
NME3-205ENST00000563854 DGLUCYQ7Z3D6 616 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms