RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 HPS3Q969F9 1004 aa19.86■□□□□ 0.77
NME3-204ENST00000563498 USP28Q96RU2 1077 aa19.86■□□□□ 0.77
NME3-204ENST00000563498 CGRRF1Q99675 332 aa19.86■□□□□ 0.77
NME3-204ENST00000563498 NUSAP1Q9BXS6 441 aaKnown RBP19.86■□□□□ 0.77
NME3-204ENST00000563498 ADAM33Q9BZ11 813 aa19.86■□□□□ 0.77
NME3-204ENST00000563498 TRIM9Q9C026 710 aa19.86■□□□□ 0.77
NME3-204ENST00000563498 ZNF518BQ9C0D4 1074 aa19.86■□□□□ 0.77
NME3-204ENST00000563498 KBTBD4Q9NVX7 518 aa19.86■□□□□ 0.77
NME3-204ENST00000563498 BCCIPQ9P287 314 aaKnown RBP eCLIP19.86■□□□□ 0.77
NME3-204ENST00000563498 ZMIZ1Q9ULJ6 1067 aa19.86■□□□□ 0.77
NME3-204ENST00000563498 TNRC6BQ9UPQ9 1833 aaKnown RBP19.86■□□□□ 0.77
NME3-204ENST00000563498 TGFB1I1O43294 461 aa19.85■□□□□ 0.77
NME3-204ENST00000563498 ADAM23O75077 832 aa19.85■□□□□ 0.77
NME3-204ENST00000563498 PTGER3P43115 390 aa19.85■□□□□ 0.77
NME3-204ENST00000563498 GAD2Q05329 585 aa19.85■□□□□ 0.77
NME3-204ENST00000563498 PREPLQ4J6C6 727 aaPredicted RBP19.85■□□□□ 0.77
NME3-204ENST00000563498 EMC10Q5UCC4 262 aa19.85■□□□□ 0.77
NME3-204ENST00000563498 SNX30Q5VWJ9 437 aa19.85■□□□□ 0.77
NME3-204ENST00000563498 PEAR1Q5VY43 1037 aaPredicted RBP19.85■□□□□ 0.77
NME3-204ENST00000563498 SLC23A3Q6PIS1 610 aa19.85■□□□□ 0.77
NME3-204ENST00000563498 PDILTQ8N807 584 aa19.85■□□□□ 0.77
NME3-204ENST00000563498 B3GALNT2Q8NCR0 500 aa19.85■□□□□ 0.77
NME3-204ENST00000563498 B3GNT5Q9BYG0 378 aa19.85■□□□□ 0.77
NME3-204ENST00000563498 CUEDC2Q9H467 287 aa19.85■□□□□ 0.77
NME3-204ENST00000563498 DPEP3Q9H4B8 488 aa19.85■□□□□ 0.77
NME3-204ENST00000563498 AGPAT3Q9NRZ7 376 aa19.85■□□□□ 0.77
NME3-204ENST00000563498 MBD1Q9UIS9 605 aaPredicted RBP19.85■□□□□ 0.77
NME3-204ENST00000563498 FAM208BQ5VWN6 2430 aa19.84■□□□□ 0.77
NME3-204ENST00000563498 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.84■□□□□ 0.77
NME3-204ENST00000563498 A8MXQ7 604 aa19.84■□□□□ 0.77
NME3-204ENST00000563498 SCAMP3O14828 347 aaKnown RBP19.84■□□□□ 0.77
NME3-204ENST00000563498 COCHO43405 550 aa19.84■□□□□ 0.77
NME3-204ENST00000563498 ATICP31939 592 aa19.84■□□□□ 0.77
NME3-204ENST00000563498 TUBP50607 506 aa19.84■□□□□ 0.77
NME3-204ENST00000563498 AMPD3Q01432 767 aa19.84■□□□□ 0.77
NME3-204ENST00000563498 KDSRQ06136 332 aa19.84■□□□□ 0.77
NME3-204ENST00000563498 CYP24A1Q07973 514 aa19.84■□□□□ 0.77
NME3-204ENST00000563498 E2F4Q16254 413 aa19.84■□□□□ 0.77
NME3-204ENST00000563498 UAP1L1Q3KQV9 507 aa19.84■□□□□ 0.77
NME3-204ENST00000563498 LY6G5CQ5SRR4 150 aa19.84■□□□□ 0.77
NME3-204ENST00000563498 LYSMD4Q5XG99 296 aa19.84■□□□□ 0.77
NME3-204ENST00000563498 CNNM4Q6P4Q7 775 aa19.84■□□□□ 0.77
NME3-204ENST00000563498 TRMT11Q7Z4G4 463 aaKnown RBP19.84■□□□□ 0.77
NME3-204ENST00000563498 ETFBKMTQ8IXQ9 262 aa19.84■□□□□ 0.77
NME3-204ENST00000563498 TMEFF1Q8IYR6 380 aa19.84■□□□□ 0.77
NME3-204ENST00000563498 XXYLT1Q8NBI6 393 aa19.84■□□□□ 0.77
NME3-204ENST00000563498 RDH13Q8NBN7 331 aa19.84■□□□□ 0.77
NME3-204ENST00000563498 HMGB4Q8WW32 186 aa19.84■□□□□ 0.77
NME3-204ENST00000563498 FBXO32Q969P5 355 aa19.84■□□□□ 0.77
NME3-204ENST00000563498 ZFRQ96KR1 1074 aaKnown RBP19.84■□□□□ 0.77
NME3-204ENST00000563498 SLC32A1Q9H598 525 aa19.84■□□□□ 0.77
NME3-204ENST00000563498 TMEM74BQ9NUR3 256 aa19.84■□□□□ 0.77
NME3-204ENST00000563498 ATP8B3O60423 1300 aa19.83■□□□□ 0.77
NME3-204ENST00000563498 UBE4BO95155 1302 aa19.83■□□□□ 0.77
NME3-204ENST00000563498 TCRBV21S2A2A0A5A6 115 aa19.83■□□□□ 0.77
NME3-204ENST00000563498 UPK3BL1B0FP48 263 aa19.83■□□□□ 0.77
NME3-204ENST00000563498 UPK3BL2E5RIL1 263 aa19.83■□□□□ 0.77
NME3-204ENST00000563498 HOXC11O43248 304 aaPredicted RBP19.83■□□□□ 0.77
NME3-204ENST00000563498 ENGP17813 658 aa19.83■□□□□ 0.77
NME3-204ENST00000563498 NASPP49321 788 aaPredicted RBP19.83■□□□□ 0.77
NME3-204ENST00000563498 IFRD2Q12894 506 aaPredicted RBP19.83■□□□□ 0.77
NME3-204ENST00000563498 TRPC3Q13507 836 aa19.83■□□□□ 0.77
NME3-204ENST00000563498 HECTD3Q5T447 861 aa19.83■□□□□ 0.77
NME3-204ENST00000563498 BTBD8Q5XKL5 378 aa19.83■□□□□ 0.77
NME3-204ENST00000563498 FRMD1Q8N878 549 aa19.83■□□□□ 0.77
NME3-204ENST00000563498 DEFB124Q8NES8 71 aa19.83■□□□□ 0.77
NME3-204ENST00000563498 GATA6Q92908 595 aa19.83■□□□□ 0.77
NME3-204ENST00000563498 CCDC127Q96BQ5 260 aa19.83■□□□□ 0.77
NME3-204ENST00000563498 SCNM1Q9BWG6 230 aa19.83■□□□□ 0.77
NME3-204ENST00000563498 XYLT2Q9H1B5 865 aa19.83■□□□□ 0.77
NME3-204ENST00000563498 ZSCAN16Q9H4T2 348 aaPredicted RBP19.83■□□□□ 0.77
NME3-204ENST00000563498 IL37Q9NZH6 218 aa19.83■□□□□ 0.77
NME3-204ENST00000563498 PILRBQ9UKJ0 227 aa19.83■□□□□ 0.77
NME3-204ENST00000563498 CIZ1Q9ULV3 898 aaPredicted RBP19.83■□□□□ 0.77
NME3-204ENST00000563498 TBC1D3BA6NDS4 549 aa19.82■□□□□ 0.76
NME3-204ENST00000563498 CLDN5O00501 218 aa19.82■□□□□ 0.76
NME3-204ENST00000563498 SPINK2P20155 84 aa19.82■□□□□ 0.76
NME3-204ENST00000563498 FAM26FQ5R3K3 315 aa19.82■□□□□ 0.76
NME3-204ENST00000563498 NUDT18Q6ZVK8 323 aa19.82■□□□□ 0.76
NME3-204ENST00000563498 ARMCX6Q7L4S7 300 aa19.82■□□□□ 0.76
NME3-204ENST00000563498 PGBD3Q8N328 593 aa19.82■□□□□ 0.76
NME3-204ENST00000563498 SYAP1Q96A49 352 aaPredicted RBP19.82■□□□□ 0.76
NME3-204ENST00000563498 GZF1Q9H116 711 aaPredicted RBP19.82■□□□□ 0.76
NME3-204ENST00000563498 VRTNQ9H8Y1 702 aa19.82■□□□□ 0.76
NME3-204ENST00000563498 COMMD8Q9NX08 183 aa19.82■□□□□ 0.76
NME3-204ENST00000563498 DEC1Q9P2X7 70 aa19.82■□□□□ 0.76
NME3-204ENST00000563498 SH3BP1Q9Y3L3 701 aa19.82■□□□□ 0.76
NME3-204ENST00000563498 FAM92AA1XBS5 289 aa19.81■□□□□ 0.76
NME3-204ENST00000563498 AP5Z1O43299 807 aa19.81■□□□□ 0.76
NME3-204ENST00000563498 TULP3O75386 442 aa19.81■□□□□ 0.76
NME3-204ENST00000563498 TOP3BO95985 862 aaKnown RBP19.81■□□□□ 0.76
NME3-204ENST00000563498 ZDHHC11BP0C7U3 371 aa19.81■□□□□ 0.76
NME3-204ENST00000563498 MAPK8P45983 427 aa19.81■□□□□ 0.76
NME3-204ENST00000563498 MYL6P60660 151 aa19.81■□□□□ 0.76
NME3-204ENST00000563498 ASIC1P78348 528 aa19.81■□□□□ 0.76
NME3-204ENST00000563498 SLC36A4Q6YBV0 504 aa19.81■□□□□ 0.76
NME3-204ENST00000563498 PIP4P1Q86T03 277 aa19.81■□□□□ 0.76
NME3-204ENST00000563498 ZNF513Q8N8E2 541 aaPredicted RBP19.81■□□□□ 0.76
NME3-204ENST00000563498 CEP76Q8TAP6 659 aa19.81■□□□□ 0.76
NME3-204ENST00000563498 SCFD1Q8WVM8 642 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms