RNA–Protein interactions for RNA: ENST00000562707.5

CMTM3-205, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CMTM3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-205ENST00000562707 HECTD3Q5T447 861 aa17.62■□□□□ 0.41
CMTM3-205ENST00000562707 EPM2AIP1Q7L775 607 aaPredicted RBP17.62■□□□□ 0.41
CMTM3-205ENST00000562707 SYT12Q8IV01 421 aa17.62■□□□□ 0.41
CMTM3-205ENST00000562707 SFTPA1Q8IWL2 248 aa17.62■□□□□ 0.41
CMTM3-205ENST00000562707 TMEFF1Q8IYR6 380 aa17.62■□□□□ 0.41
CMTM3-205ENST00000562707 XXYLT1Q8NBI6 393 aa17.62■□□□□ 0.41
CMTM3-205ENST00000562707 B3GALNT2Q8NCR0 500 aa17.62■□□□□ 0.41
CMTM3-205ENST00000562707 HMGB4Q8WW32 186 aa17.62■□□□□ 0.41
CMTM3-205ENST00000562707 SYAP1Q96A49 352 aaPredicted RBP17.62■□□□□ 0.41
CMTM3-205ENST00000562707 B3GNT5Q9BYG0 378 aa17.62■□□□□ 0.41
CMTM3-205ENST00000562707 DPEP3Q9H4B8 488 aa17.62■□□□□ 0.41
CMTM3-205ENST00000562707 CHORDC1Q9UHD1 332 aaPredicted RBP17.62■□□□□ 0.41
CMTM3-205ENST00000562707 SH3BP1Q9Y3L3 701 aa17.62■□□□□ 0.41
CMTM3-205ENST00000562707 CNOT1A5YKK6 2376 aaKnown RBP17.62■□□□□ 0.41
CMTM3-205ENST00000562707 ATP8B3O60423 1300 aa17.62■□□□□ 0.41
CMTM3-205ENST00000562707 C1QTNF9BB2RNN3 333 aa17.61■□□□□ 0.41
CMTM3-205ENST00000562707 TGFB1I1O43294 461 aa17.61■□□□□ 0.41
CMTM3-205ENST00000562707 COCHO43405 550 aa17.61■□□□□ 0.41
CMTM3-205ENST00000562707 STAU1O95793 577 aaKnown RBP17.61■□□□□ 0.41
CMTM3-205ENST00000562707 C1QTNF9P0C862 333 aa17.61■□□□□ 0.41
CMTM3-205ENST00000562707 NASPP49321 788 aaPredicted RBP17.61■□□□□ 0.41
CMTM3-205ENST00000562707 MYL6P60660 151 aa17.61■□□□□ 0.41
CMTM3-205ENST00000562707 SPDYCQ5MJ68 293 aa17.61■□□□□ 0.41
CMTM3-205ENST00000562707 ARMCX6Q7L4S7 300 aa17.61■□□□□ 0.41
CMTM3-205ENST00000562707 TRMT11Q7Z4G4 463 aaKnown RBP17.61■□□□□ 0.41
CMTM3-205ENST00000562707 C12orf40Q86WS4 652 aa17.61■□□□□ 0.41
CMTM3-205ENST00000562707 NELFCDQ8IXH7 590 aa17.61■□□□□ 0.41
CMTM3-205ENST00000562707 IQUBQ8NA54 791 aa17.61■□□□□ 0.41
CMTM3-205ENST00000562707 KCNV2Q8TDN2 545 aa17.61■□□□□ 0.41
CMTM3-205ENST00000562707 DHX58Q96C10 678 aa17.61■□□□□ 0.41
CMTM3-205ENST00000562707 MED10Q9BTT4 135 aa17.61■□□□□ 0.41
CMTM3-205ENST00000562707 SLC32A1Q9H598 525 aa17.61■□□□□ 0.41
CMTM3-205ENST00000562707 DEC1Q9P2X7 70 aa17.61■□□□□ 0.41
CMTM3-205ENST00000562707 MTMR6Q9Y217 621 aa17.61■□□□□ 0.41
CMTM3-205ENST00000562707 TCRBV21S2A2A0A5A6 115 aa17.6■□□□□ 0.41
CMTM3-205ENST00000562707 ZBTB24O43167 697 aaPredicted RBP17.6■□□□□ 0.41
CMTM3-205ENST00000562707 CLSTN1O94985 981 aa17.6■□□□□ 0.41
CMTM3-205ENST00000562707 PTGER3P43115 390 aa17.6■□□□□ 0.41
CMTM3-205ENST00000562707 MAPK8P45983 427 aa17.6■□□□□ 0.41
CMTM3-205ENST00000562707 E2F4Q16254 413 aa17.6■□□□□ 0.41
CMTM3-205ENST00000562707 LYSMD4Q5XG99 296 aa17.6■□□□□ 0.41
CMTM3-205ENST00000562707 NAT16Q8N8M0 369 aa17.6■□□□□ 0.41
CMTM3-205ENST00000562707 LINC00301Q8NCQ3 95 aa17.6■□□□□ 0.41
CMTM3-205ENST00000562707 DEFB124Q8NES8 71 aa17.6■□□□□ 0.41
CMTM3-205ENST00000562707 ZNF516Q92618 1163 aa17.6■□□□□ 0.41
CMTM3-205ENST00000562707 TNIP3Q96KP6 325 aa17.6■□□□□ 0.41
CMTM3-205ENST00000562707 KCNK16Q96T55 309 aa17.6■□□□□ 0.41
CMTM3-205ENST00000562707 ADAM33Q9BZ11 813 aa17.6■□□□□ 0.41
CMTM3-205ENST00000562707 NACA2Q9H009 215 aa17.6■□□□□ 0.41
CMTM3-205ENST00000562707 ZDHHC4Q9NPG8 344 aa17.6■□□□□ 0.41
CMTM3-205ENST00000562707 TMEM30AQ9NV96 361 aa17.6■□□□□ 0.41
CMTM3-205ENST00000562707 UBE4BO95155 1302 aa17.6■□□□□ 0.41
CMTM3-205ENST00000562707 DENND4CQ5VZ89 1909 aa17.6■□□□□ 0.41
CMTM3-205ENST00000562707 ZNF638Q14966 1978 aaKnown RBP17.6■□□□□ 0.41
CMTM3-205ENST00000562707 ATG2BQ96BY7 2078 aa17.6■□□□□ 0.41
CMTM3-205ENST00000562707 ZFHX4Q86UP3 3567 aa17.59■□□□□ 0.41
CMTM3-205ENST00000562707 OBSL1O75147 1896 aa17.59■□□□□ 0.41
CMTM3-205ENST00000562707 SPTLC2O15270 562 aa17.59■□□□□ 0.41
CMTM3-205ENST00000562707 ADAM23O75077 832 aa17.59■□□□□ 0.41
CMTM3-205ENST00000562707 PPP6R2O75170 966 aa17.59■□□□□ 0.41
CMTM3-205ENST00000562707 SPINK2P20155 84 aa17.59■□□□□ 0.41
CMTM3-205ENST00000562707 ATXN3P54252 364 aaPredicted RBP17.59■□□□□ 0.41
CMTM3-205ENST00000562707 ANO4Q32M45 955 aa17.59■□□□□ 0.41
CMTM3-205ENST00000562707 MAP7D1Q3KQU3 841 aa17.59■□□□□ 0.41
CMTM3-205ENST00000562707 CNNM4Q6P4Q7 775 aa17.59■□□□□ 0.41
CMTM3-205ENST00000562707 FRMD1Q8N878 549 aa17.59■□□□□ 0.41
CMTM3-205ENST00000562707 INTS4Q96HW7 963 aaKnown RBP17.59■□□□□ 0.41
CMTM3-205ENST00000562707 C7orf25Q9BPX7 421 aa17.59■□□□□ 0.41
CMTM3-205ENST00000562707 XYLT2Q9H1B5 865 aa17.59■□□□□ 0.41
CMTM3-205ENST00000562707 TMEM74BQ9NUR3 256 aa17.59■□□□□ 0.41
CMTM3-205ENST00000562707 COMMD8Q9NX08 183 aa17.59■□□□□ 0.41
CMTM3-205ENST00000562707 CGNQ9P2M7 1197 aaKnown RBP17.59■□□□□ 0.41
CMTM3-205ENST00000562707 MBD1Q9UIS9 605 aaPredicted RBP17.59■□□□□ 0.41
CMTM3-205ENST00000562707 ZMIZ1Q9ULJ6 1067 aa17.59■□□□□ 0.41
CMTM3-205ENST00000562707 SPAG17Q6Q759 2223 aa17.59■□□□□ 0.41
CMTM3-205ENST00000562707 HOXC11O43248 304 aaPredicted RBP17.58■□□□□ 0.4
CMTM3-205ENST00000562707 AP5Z1O43299 807 aa17.58■□□□□ 0.4
CMTM3-205ENST00000562707 EXOC3O60645 756 aa17.58■□□□□ 0.4
CMTM3-205ENST00000562707 TULP3O75386 442 aa17.58■□□□□ 0.4
CMTM3-205ENST00000562707 CFIP05156 583 aa17.58■□□□□ 0.4
CMTM3-205ENST00000562707 CHRM1P11229 460 aaPredicted RBP17.58■□□□□ 0.4
CMTM3-205ENST00000562707 ENGP17813 658 aa17.58■□□□□ 0.4
CMTM3-205ENST00000562707 TUBP50607 506 aa17.58■□□□□ 0.4
CMTM3-205ENST00000562707 SLC5A3P53794 718 aa17.58■□□□□ 0.4
CMTM3-205ENST00000562707 CDH8P55286 799 aa17.58■□□□□ 0.4
CMTM3-205ENST00000562707 BIRC3Q13489 604 aa17.58■□□□□ 0.4
CMTM3-205ENST00000562707 ZNF667Q5HYK9 610 aa17.58■□□□□ 0.4
CMTM3-205ENST00000562707 SNX30Q5VWJ9 437 aa17.58■□□□□ 0.4
CMTM3-205ENST00000562707 SLC23A3Q6PIS1 610 aa17.58■□□□□ 0.4
CMTM3-205ENST00000562707 SLC36A4Q6YBV0 504 aa17.58■□□□□ 0.4
CMTM3-205ENST00000562707 UNC13DQ70J99 1090 aa17.58■□□□□ 0.4
CMTM3-205ENST00000562707 FAM35AQ86V20 835 aa17.58■□□□□ 0.4
CMTM3-205ENST00000562707 ZNF513Q8N8E2 541 aaPredicted RBP17.58■□□□□ 0.4
CMTM3-205ENST00000562707 KDF1Q8NAX2 398 aaPredicted RBP17.58■□□□□ 0.4
CMTM3-205ENST00000562707 SCAMP5Q8TAC9 235 aa17.58■□□□□ 0.4
CMTM3-205ENST00000562707 CEP76Q8TAP6 659 aa17.58■□□□□ 0.4
CMTM3-205ENST00000562707 SCFD1Q8WVM8 642 aa17.58■□□□□ 0.4
CMTM3-205ENST00000562707 ZFRQ96KR1 1074 aaKnown RBP17.58■□□□□ 0.4
CMTM3-205ENST00000562707 ZNF396Q96N95 335 aaPredicted RBP17.58■□□□□ 0.4
CMTM3-205ENST00000562707 DMAP1Q9NPF5 467 aaPredicted RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms