RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 ZNF628Q5EBL2 1059 aa3.87□□□□□ -1.79
HDGFL3-202ENST00000562702 VPS53Q5VIR6 699 aa3.87□□□□□ -1.79
HDGFL3-202ENST00000562702 PPP4R4Q6NUP7 873 aa3.87□□□□□ -1.79
HDGFL3-202ENST00000562702 ZNF783Q6ZMS7 281 aa3.87□□□□□ -1.79
HDGFL3-202ENST00000562702 C18orf65Q6ZTR6 163 aa3.87□□□□□ -1.79
HDGFL3-202ENST00000562702 MAEAQ7L5Y9 396 aa3.87□□□□□ -1.79
HDGFL3-202ENST00000562702 SRGAP1Q7Z6B7 1085 aa3.87□□□□□ -1.79
HDGFL3-202ENST00000562702 FMNL3Q8IVF7 1028 aa3.87□□□□□ -1.79
HDGFL3-202ENST00000562702 WDR75Q8IWA0 830 aaKnown RBP3.87□□□□□ -1.79
HDGFL3-202ENST00000562702 KIAA0319LQ8IZA0 1049 aa3.87□□□□□ -1.79
HDGFL3-202ENST00000562702 CELF5Q8N6W0 485 aaKnown RBP3.87□□□□□ -1.79
HDGFL3-202ENST00000562702 TRMOQ9BU70 441 aa3.87□□□□□ -1.79
HDGFL3-202ENST00000562702 ZMAT3Q9HA38 289 aaKnown RBP3.87□□□□□ -1.79
HDGFL3-202ENST00000562702 GLOD4Q9HC38 313 aa3.87□□□□□ -1.79
HDGFL3-202ENST00000562702 SERHLQ9NQF3 203 aa3.87□□□□□ -1.79
HDGFL3-202ENST00000562702 PRDM11Q9NQV5 511 aa3.87□□□□□ -1.79
HDGFL3-202ENST00000562702 MRPS18AQ9NVS2 196 aaKnown RBP3.87□□□□□ -1.79
HDGFL3-202ENST00000562702 TMX2Q9Y320 296 aa3.87□□□□□ -1.79
HDGFL3-202ENST00000562702 PAXBP1Q9Y5B6 917 aa3.87□□□□□ -1.79
HDGFL3-202ENST00000562702 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.87□□□□□ -1.79
HDGFL3-202ENST00000562702 TMEM232C9JQI7 657 aa3.86□□□□□ -1.79
HDGFL3-202ENST00000562702 SMAD6O43541 496 aaKnown RBP3.86□□□□□ -1.79
HDGFL3-202ENST00000562702 FRS3O43559 492 aa3.86□□□□□ -1.79
HDGFL3-202ENST00000562702 RNF8O76064 485 aa3.86□□□□□ -1.79
HDGFL3-202ENST00000562702 XRCC6P12956 609 aaKnown RBP eCLIP3.86□□□□□ -1.79
HDGFL3-202ENST00000562702 NPR1P16066 1061 aa3.86□□□□□ -1.79
HDGFL3-202ENST00000562702 VIPR2P41587 438 aa3.86□□□□□ -1.79
HDGFL3-202ENST00000562702 CDKN2AP42771 156 aaKnown RBP3.86□□□□□ -1.79
HDGFL3-202ENST00000562702 GBX1Q14549 363 aa3.86□□□□□ -1.79
HDGFL3-202ENST00000562702 IQCB1Q15051 598 aa3.86□□□□□ -1.79
HDGFL3-202ENST00000562702 MEX3CQ5U5Q3 659 aaKnown RBP3.86□□□□□ -1.79
HDGFL3-202ENST00000562702 LMBRD2Q68DH5 695 aaPredicted RBP3.86□□□□□ -1.79
HDGFL3-202ENST00000562702 FCRL6Q6DN72 434 aa3.86□□□□□ -1.79
HDGFL3-202ENST00000562702 KIRREL2Q6UWL6 708 aa3.86□□□□□ -1.79
HDGFL3-202ENST00000562702 TERB1Q8NA31 727 aa3.86□□□□□ -1.79
HDGFL3-202ENST00000562702 OR6B3Q8NGW1 331 aa3.86□□□□□ -1.79
HDGFL3-202ENST00000562702 ZC3H10Q96K80 434 aaKnown RBP3.86□□□□□ -1.79
HDGFL3-202ENST00000562702 SLC46A1Q96NT5 459 aa3.86□□□□□ -1.79
HDGFL3-202ENST00000562702 NT5C1BQ96P26 610 aa3.86□□□□□ -1.79
HDGFL3-202ENST00000562702 FYTTD1Q96QD9 318 aaKnown RBP3.86□□□□□ -1.79
HDGFL3-202ENST00000562702 SNX18Q96RF0 628 aa3.86□□□□□ -1.79
HDGFL3-202ENST00000562702 P2RX7Q99572 595 aaKnown RBP3.86□□□□□ -1.79
HDGFL3-202ENST00000562702 MACROD1Q9BQ69 325 aa3.86□□□□□ -1.79
HDGFL3-202ENST00000562702 TRIM54Q9BYV2 358 aa3.86□□□□□ -1.79
HDGFL3-202ENST00000562702 TTYH3Q9C0H2 523 aa3.86□□□□□ -1.79
HDGFL3-202ENST00000562702 SHOC2Q9UQ13 582 aa3.86□□□□□ -1.79
HDGFL3-202ENST00000562702 CFAP69A5D8W1 941 aa3.85□□□□□ -1.79
HDGFL3-202ENST00000562702 FESP07332 822 aa3.85□□□□□ -1.79
HDGFL3-202ENST00000562702 KITP10721 976 aa3.85□□□□□ -1.79
HDGFL3-202ENST00000562702 CYP2C9P11712 490 aa3.85□□□□□ -1.79
HDGFL3-202ENST00000562702 SLC7A1P30825 629 aa3.85□□□□□ -1.79
HDGFL3-202ENST00000562702 ME1P48163 572 aa3.85□□□□□ -1.79
HDGFL3-202ENST00000562702 PXNP49023 591 aaPredicted RBP3.85□□□□□ -1.79
HDGFL3-202ENST00000562702 SLC11A2P49281 568 aa3.85□□□□□ -1.79
HDGFL3-202ENST00000562702 TOB1P50616 345 aaPredicted RBP3.85□□□□□ -1.79
HDGFL3-202ENST00000562702 ARFIP2P53365 341 aa3.85□□□□□ -1.79
HDGFL3-202ENST00000562702 WNT3P56703 355 aa3.85□□□□□ -1.79
HDGFL3-202ENST00000562702 CNN3Q15417 329 aaKnown RBP3.85□□□□□ -1.79
HDGFL3-202ENST00000562702 LEXMQ3ZCV2 418 aa3.85□□□□□ -1.79
HDGFL3-202ENST00000562702 DAB2IPQ5VWQ8 1189 aa3.85□□□□□ -1.79
HDGFL3-202ENST00000562702 TMEM108Q6UXF1 575 aa3.85□□□□□ -1.79
HDGFL3-202ENST00000562702 CCDC149Q6ZUS6 474 aa3.85□□□□□ -1.79
HDGFL3-202ENST00000562702 RBMXL3Q8N7X1 1067 aaKnown RBP3.85□□□□□ -1.79
HDGFL3-202ENST00000562702 IL31RAQ8NI17 732 aa3.85□□□□□ -1.79
HDGFL3-202ENST00000562702 TTC8Q8TAM2 541 aa3.85□□□□□ -1.79
HDGFL3-202ENST00000562702 XAGE5Q8WWM1 108 aa3.85□□□□□ -1.79
HDGFL3-202ENST00000562702 SUCLG2Q96I99 432 aa3.85□□□□□ -1.79
HDGFL3-202ENST00000562702 PPP1R10Q96QC0 940 aaKnown RBP3.85□□□□□ -1.79
HDGFL3-202ENST00000562702 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.85□□□□□ -1.79
HDGFL3-202ENST00000562702 XPR1Q9UBH6 696 aa3.85□□□□□ -1.79
HDGFL3-202ENST00000562702 TPCN1Q9ULQ1 816 aa3.85□□□□□ -1.79
HDGFL3-202ENST00000562702 L1RE1Q9UN81 338 aa3.85□□□□□ -1.79
HDGFL3-202ENST00000562702 ISM1B1AKI9 464 aa3.84□□□□□ -1.79
HDGFL3-202ENST00000562702 BTN3A1O00481 513 aa3.84□□□□□ -1.79
HDGFL3-202ENST00000562702 ADAM10O14672 748 aa3.84□□□□□ -1.79
HDGFL3-202ENST00000562702 TPP1O14773 563 aa3.84□□□□□ -1.79
HDGFL3-202ENST00000562702 TBC1D4O60343 1298 aa3.84□□□□□ -1.79
HDGFL3-202ENST00000562702 MGEA5O60502 916 aa3.84□□□□□ -1.79
HDGFL3-202ENST00000562702 TULP3O75386 442 aa3.84□□□□□ -1.79
HDGFL3-202ENST00000562702 ZBED1O96006 694 aa3.84□□□□□ -1.79
HDGFL3-202ENST00000562702 HRGP04196 525 aa3.84□□□□□ -1.79
HDGFL3-202ENST00000562702 EN2P19622 333 aaPredicted RBP3.84□□□□□ -1.79
HDGFL3-202ENST00000562702 PPIFP30405 207 aaKnown RBP3.84□□□□□ -1.79
HDGFL3-202ENST00000562702 UCP3P55916 312 aa3.84□□□□□ -1.79
HDGFL3-202ENST00000562702 FAM193AP78312 1265 aa3.84□□□□□ -1.79
HDGFL3-202ENST00000562702 RHDQ02161 417 aa3.84□□□□□ -1.79
HDGFL3-202ENST00000562702 SLC13A2Q13183 592 aa3.84□□□□□ -1.79
HDGFL3-202ENST00000562702 RAB32Q13637 225 aa3.84□□□□□ -1.79
HDGFL3-202ENST00000562702 BOP1Q14137 746 aaKnown RBP3.84□□□□□ -1.79
HDGFL3-202ENST00000562702 GRM3Q14832 879 aa3.84□□□□□ -1.79
HDGFL3-202ENST00000562702 POLD3Q15054 466 aaPredicted RBP3.84□□□□□ -1.79
HDGFL3-202ENST00000562702 UBAP2Q5T6F2 1119 aaKnown RBP3.84□□□□□ -1.79
HDGFL3-202ENST00000562702 SWSAP1Q6NVH7 229 aa3.84□□□□□ -1.79
HDGFL3-202ENST00000562702 DARS2Q6PI48 645 aaKnown RBP3.84□□□□□ -1.79
HDGFL3-202ENST00000562702 APOA5Q6Q788 366 aa3.84□□□□□ -1.79
HDGFL3-202ENST00000562702 CHST15Q7LFX5 561 aaPredicted RBP3.84□□□□□ -1.79
HDGFL3-202ENST00000562702 C14orf80Q86SX3 495 aa3.84□□□□□ -1.79
HDGFL3-202ENST00000562702 DNAJC5GQ8N7S2 189 aa3.84□□□□□ -1.79
HDGFL3-202ENST00000562702 LRTOMTQ8WZ04 291 aa3.84□□□□□ -1.79
HDGFL3-202ENST00000562702 C22orf23Q9BZE7 217 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms