RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 LCP1P13796 627 aa10.32□□□□□ -0.76
CLK3-208ENST00000562626 GBP2P32456 591 aaPredicted RBP10.32□□□□□ -0.76
CLK3-208ENST00000562626 RPL34P49207 117 aaKnown RBP10.32□□□□□ -0.76
CLK3-208ENST00000562626 TKTL1P51854 596 aa10.32□□□□□ -0.76
CLK3-208ENST00000562626 ZXDBP98169 803 aa10.32□□□□□ -0.76
CLK3-208ENST00000562626 PTK2Q05397 1052 aa10.32□□□□□ -0.76
CLK3-208ENST00000562626 TBX2Q13207 712 aaPredicted RBP10.32□□□□□ -0.76
CLK3-208ENST00000562626 PTPN20Q4JDL3 420 aa10.32□□□□□ -0.76
CLK3-208ENST00000562626 C2CD6Q53TS8 623 aa10.32□□□□□ -0.76
CLK3-208ENST00000562626 CYP4A22Q5TCH4 519 aa10.32□□□□□ -0.76
CLK3-208ENST00000562626 HGSNATQ68CP4 663 aa10.32□□□□□ -0.76
CLK3-208ENST00000562626 TMC6Q7Z403 805 aa10.32□□□□□ -0.76
CLK3-208ENST00000562626 RSAD2Q8WXG1 361 aa10.32□□□□□ -0.76
CLK3-208ENST00000562626 FBXO32Q969P5 355 aa10.32□□□□□ -0.76
CLK3-208ENST00000562626 LRRC3BQ96PB8 259 aa10.32□□□□□ -0.76
CLK3-208ENST00000562626 CPXM1Q96SM3 734 aa10.32□□□□□ -0.76
CLK3-208ENST00000562626 CYP2S1Q96SQ9 504 aa10.32□□□□□ -0.76
CLK3-208ENST00000562626 SLC4A5Q9BY07 1137 aa10.32□□□□□ -0.76
CLK3-208ENST00000562626 SLC46A2Q9BY10 475 aa10.32□□□□□ -0.76
CLK3-208ENST00000562626 PLA2G2FQ9BZM2 168 aa10.32□□□□□ -0.76
CLK3-208ENST00000562626 ATXN3LQ9H3M9 355 aa10.32□□□□□ -0.76
CLK3-208ENST00000562626 NUDT5Q9UKK9 219 aa10.32□□□□□ -0.76
CLK3-208ENST00000562626 CAPN11Q9UMQ6 739 aa10.32□□□□□ -0.76
CLK3-208ENST00000562626 PIEZO1Q92508 2521 aa10.32□□□□□ -0.76
CLK3-208ENST00000562626 A0A1W2PQH9 124 aa10.31□□□□□ -0.76
CLK3-208ENST00000562626 A0A1W2PQJ5 194 aa10.31□□□□□ -0.76
CLK3-208ENST00000562626 ZNF840PA6NDX5 716 aa10.31□□□□□ -0.76
CLK3-208ENST00000562626 E5RJQ4 531 aa10.31□□□□□ -0.76
CLK3-208ENST00000562626 PAPSS1O43252 624 aaPredicted RBP10.31□□□□□ -0.76
CLK3-208ENST00000562626 CBFA2T2O43439 604 aa10.31□□□□□ -0.76
CLK3-208ENST00000562626 ERBB2P04626 1255 aa10.31□□□□□ -0.76
CLK3-208ENST00000562626 ASGR2P07307 311 aa10.31□□□□□ -0.76
CLK3-208ENST00000562626 LAMP2P13473 410 aa10.31□□□□□ -0.76
CLK3-208ENST00000562626 YWHAQP27348 245 aa10.31□□□□□ -0.76
CLK3-208ENST00000562626 CDH5P33151 784 aaPredicted RBP10.31□□□□□ -0.76
CLK3-208ENST00000562626 PDE6CP51160 858 aa10.31□□□□□ -0.76
CLK3-208ENST00000562626 NOMO3P69849 1222 aa10.31□□□□□ -0.76
CLK3-208ENST00000562626 CDR2Q01850 454 aa10.31□□□□□ -0.76
CLK3-208ENST00000562626 PDCLQ13371 301 aa10.31□□□□□ -0.76
CLK3-208ENST00000562626 STILQ15468 1287 aa10.31□□□□□ -0.76
CLK3-208ENST00000562626 TAF12Q16514 161 aa10.31□□□□□ -0.76
CLK3-208ENST00000562626 AAK1Q2M2I8 961 aa10.31□□□□□ -0.76
CLK3-208ENST00000562626 PUS10Q3MIT2 529 aaKnown RBP10.31□□□□□ -0.76
CLK3-208ENST00000562626 FAM78AQ5JUQ0 283 aa10.31□□□□□ -0.76
CLK3-208ENST00000562626 GPR158Q5T848 1215 aa10.31□□□□□ -0.76
CLK3-208ENST00000562626 WDR59Q6PJI9 974 aa10.31□□□□□ -0.76
CLK3-208ENST00000562626 PARM1Q6UWI2 310 aa10.31□□□□□ -0.76
CLK3-208ENST00000562626 ZNF571Q7Z3V5 609 aaPredicted RBP10.31□□□□□ -0.76
CLK3-208ENST00000562626 ADHFE1Q8IWW8 467 aa10.31□□□□□ -0.76
CLK3-208ENST00000562626 MAB21L3Q8N8X9 362 aa10.31□□□□□ -0.76
CLK3-208ENST00000562626 ADAMTS19Q8TE59 1207 aa10.31□□□□□ -0.76
CLK3-208ENST00000562626 KCTD13Q8WZ19 329 aa10.31□□□□□ -0.76
CLK3-208ENST00000562626 FGF14Q92915 247 aa10.31□□□□□ -0.76
CLK3-208ENST00000562626 KHSRPQ92945 711 aaKnown RBP eCLIP10.31□□□□□ -0.76
CLK3-208ENST00000562626 WBP2Q969T9 261 aa10.31□□□□□ -0.76
CLK3-208ENST00000562626 CEP295NLQ96MC4 621 aa10.31□□□□□ -0.76
CLK3-208ENST00000562626 KXD1Q9BQD3 176 aa10.31□□□□□ -0.76
CLK3-208ENST00000562626 UBXN6Q9BZV1 441 aa10.31□□□□□ -0.76
CLK3-208ENST00000562626 RNF38Q9H0F5 515 aa10.31□□□□□ -0.76
CLK3-208ENST00000562626 CCSER2Q9H7U1 834 aa10.31□□□□□ -0.76
CLK3-208ENST00000562626 PNPLA8Q9NP80 782 aa10.31□□□□□ -0.76
CLK3-208ENST00000562626 TAS2R14Q9NYV8 317 aa10.31□□□□□ -0.76
CLK3-208ENST00000562626 AIPL1Q9NZN9 384 aa10.31□□□□□ -0.76
CLK3-208ENST00000562626 HESX1Q9UBX0 185 aa10.31□□□□□ -0.76
CLK3-208ENST00000562626 CDH7Q9ULB5 785 aa10.31□□□□□ -0.76
CLK3-208ENST00000562626 SCML2Q9UQR0 700 aa10.31□□□□□ -0.76
CLK3-208ENST00000562626 CCL26Q9Y258 94 aa10.31□□□□□ -0.76
CLK3-208ENST00000562626 DAAM1Q9Y4D1 1078 aa10.31□□□□□ -0.76
CLK3-208ENST00000562626 BDP1A6H8Y1 2624 aa10.3□□□□□ -0.76
CLK3-208ENST00000562626 YJEFN3A6XGL0 299 aa10.3□□□□□ -0.76
CLK3-208ENST00000562626 E7ENQ6 273 aa10.3□□□□□ -0.76
CLK3-208ENST00000562626 MDM4O15151 490 aa10.3□□□□□ -0.76
CLK3-208ENST00000562626 MED7O43513 233 aa10.3□□□□□ -0.76
CLK3-208ENST00000562626 RTN3O95197 1032 aaPredicted RBP10.3□□□□□ -0.76
CLK3-208ENST00000562626 TBX18O95935 607 aa10.3□□□□□ -0.76
CLK3-208ENST00000562626 OAS1P00973 400 aaKnown RBP10.3□□□□□ -0.76
CLK3-208ENST00000562626 CYP1A1P04798 512 aaPredicted RBP10.3□□□□□ -0.76
CLK3-208ENST00000562626 FYNP06241 537 aa10.3□□□□□ -0.76
CLK3-208ENST00000562626 UNGP13051 313 aaPredicted RBP10.3□□□□□ -0.76
CLK3-208ENST00000562626 FERP16591 822 aa10.3□□□□□ -0.76
CLK3-208ENST00000562626 CDC25CP30307 473 aa10.3□□□□□ -0.76
CLK3-208ENST00000562626 VIPR2P41587 438 aa10.3□□□□□ -0.76
CLK3-208ENST00000562626 PRKCIP41743 596 aa10.3□□□□□ -0.76
CLK3-208ENST00000562626 ADKP55263 362 aaKnown RBP10.3□□□□□ -0.76
CLK3-208ENST00000562626 DAOAP59103 153 aa10.3□□□□□ -0.76
CLK3-208ENST00000562626 PTP4A2Q12974 167 aa10.3□□□□□ -0.76
CLK3-208ENST00000562626 HTR4Q13639 388 aa10.3□□□□□ -0.76
CLK3-208ENST00000562626 TAF5Q15542 800 aa10.3□□□□□ -0.76
CLK3-208ENST00000562626 ASIC2Q16515 512 aa10.3□□□□□ -0.76
CLK3-208ENST00000562626 SFMBT2Q5VUG0 894 aa10.3□□□□□ -0.76
CLK3-208ENST00000562626 NAA35Q5VZE5 725 aa10.3□□□□□ -0.76
CLK3-208ENST00000562626 SPECC1LQ69YQ0 1117 aa10.3□□□□□ -0.76
CLK3-208ENST00000562626 PM20D1Q6GTS8 502 aa10.3□□□□□ -0.76
CLK3-208ENST00000562626 TANGO2Q6ICL3 276 aa10.3□□□□□ -0.76
CLK3-208ENST00000562626 FAM183BPQ6ZVS7 135 aa10.3□□□□□ -0.76
CLK3-208ENST00000562626 CCDC186Q7Z3E2 898 aa10.3□□□□□ -0.76
CLK3-208ENST00000562626 SCUBE3Q8IX30 993 aa10.3□□□□□ -0.76
CLK3-208ENST00000562626 ARL14EPQ8N8R7 260 aaPredicted RBP10.3□□□□□ -0.76
CLK3-208ENST00000562626 TDRD5Q8NAT2 981 aaKnown RBP10.3□□□□□ -0.76
CLK3-208ENST00000562626 LEMD2Q8NC56 503 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms