RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 RSPRY1Q96DX4 576 aa17.63■□□□□ 0.41
CLK3-207ENST00000562389 STK33Q9BYT3 514 aa17.63■□□□□ 0.41
CLK3-207ENST00000562389 RTN4Q9NQC3 1192 aaKnown RBP17.63■□□□□ 0.41
CLK3-207ENST00000562389 GMIPQ9P107 970 aa17.63■□□□□ 0.41
CLK3-207ENST00000562389 GOLGA6L19H0YKK7 550 aa17.62■□□□□ 0.41
CLK3-207ENST00000562389 TULP2O00295 520 aa17.62■□□□□ 0.41
CLK3-207ENST00000562389 DPYSL4O14531 572 aa17.62■□□□□ 0.41
CLK3-207ENST00000562389 CYP26A1O43174 497 aa17.62■□□□□ 0.41
CLK3-207ENST00000562389 THAP12O43422 761 aa17.62■□□□□ 0.41
CLK3-207ENST00000562389 OLFM2O95897 454 aa17.62■□□□□ 0.41
CLK3-207ENST00000562389 PTK2Q05397 1052 aa17.62■□□□□ 0.41
CLK3-207ENST00000562389 FILIP1LQ4L180 1135 aa17.62■□□□□ 0.41
CLK3-207ENST00000562389 TRIM67Q6ZTA4 783 aa17.62■□□□□ 0.41
CLK3-207ENST00000562389 ARL14EPQ8N8R7 260 aaPredicted RBP17.62■□□□□ 0.41
CLK3-207ENST00000562389 SLC35F5Q8WV83 523 aa17.62■□□□□ 0.41
CLK3-207ENST00000562389 ZNF606Q8WXB4 792 aa17.62■□□□□ 0.41
CLK3-207ENST00000562389 KCTD13Q8WZ19 329 aa17.62■□□□□ 0.41
CLK3-207ENST00000562389 USP13Q92995 863 aaPredicted RBP17.62■□□□□ 0.41
CLK3-207ENST00000562389 SECISBP2LQ93073 1101 aaKnown RBP17.62■□□□□ 0.41
CLK3-207ENST00000562389 SLC22A12Q96S37 553 aa17.62■□□□□ 0.41
CLK3-207ENST00000562389 SMG9Q9H0W8 520 aaKnown RBP17.62■□□□□ 0.41
CLK3-207ENST00000562389 TSPY26PQ9H489 355 aa17.62■□□□□ 0.41
CLK3-207ENST00000562389 ACP6Q9NPH0 428 aa17.62■□□□□ 0.41
CLK3-207ENST00000562389 TLR8Q9NR97 1041 aaKnown RBP17.62■□□□□ 0.41
CLK3-207ENST00000562389 FAM207AQ9NSI2 230 aaPredicted RBP17.62■□□□□ 0.41
CLK3-207ENST00000562389 TDP1Q9NUW8 608 aa17.62■□□□□ 0.41
CLK3-207ENST00000562389 CHORDC1Q9UHD1 332 aaPredicted RBP17.62■□□□□ 0.41
CLK3-207ENST00000562389 TECTAO75443 2155 aa17.62■□□□□ 0.41
CLK3-207ENST00000562389 COL4A2P08572 1712 aa17.61■□□□□ 0.41
CLK3-207ENST00000562389 BDP1A6H8Y1 2624 aa17.61■□□□□ 0.41
CLK3-207ENST00000562389 A0A1B0GTH6 734 aa17.61■□□□□ 0.41
CLK3-207ENST00000562389 F8VZ95 297 aa17.61■□□□□ 0.41
CLK3-207ENST00000562389 EPHB6O15197 1021 aa17.61■□□□□ 0.41
CLK3-207ENST00000562389 ABL1P00519 1130 aa17.61■□□□□ 0.41
CLK3-207ENST00000562389 CKMP06732 381 aa17.61■□□□□ 0.41
CLK3-207ENST00000562389 PNMA6AP0CW24 399 aaPredicted RBP17.61■□□□□ 0.41
CLK3-207ENST00000562389 TCF3P15923 654 aa17.61■□□□□ 0.41
CLK3-207ENST00000562389 HDCP19113 662 aa17.61■□□□□ 0.41
CLK3-207ENST00000562389 CLCN1P35523 988 aa17.61■□□□□ 0.41
CLK3-207ENST00000562389 BPIFB4P59827 614 aa17.61■□□□□ 0.41
CLK3-207ENST00000562389 POLR2FP61218 127 aaKnown RBP17.61■□□□□ 0.41
CLK3-207ENST00000562389 FCHO2Q0JRZ9 810 aa17.61■□□□□ 0.41
CLK3-207ENST00000562389 GRM2Q14416 872 aa17.61■□□□□ 0.41
CLK3-207ENST00000562389 NEK11Q8NG66 645 aa17.61■□□□□ 0.41
CLK3-207ENST00000562389 PCMTD1Q96MG8 357 aaPredicted RBP17.61■□□□□ 0.41
CLK3-207ENST00000562389 CYP2S1Q96SQ9 504 aa17.61■□□□□ 0.41
CLK3-207ENST00000562389 TRMT61BQ9BVS5 477 aaKnown RBP17.61■□□□□ 0.41
CLK3-207ENST00000562389 C1QTNF1Q9BXJ1 281 aa17.61■□□□□ 0.41
CLK3-207ENST00000562389 ARHGAP26Q9UNA1 814 aa17.61■□□□□ 0.41
CLK3-207ENST00000562389 CCL26Q9Y258 94 aa17.61■□□□□ 0.41
CLK3-207ENST00000562389 TEX33O43247 280 aa17.6■□□□□ 0.41
CLK3-207ENST00000562389 SERPINC1P01008 464 aa17.6■□□□□ 0.41
CLK3-207ENST00000562389 PSEN1P49768 467 aa17.6■□□□□ 0.41
CLK3-207ENST00000562389 TKTL1P51854 596 aa17.6■□□□□ 0.41
CLK3-207ENST00000562389 JAM2P57087 298 aa17.6■□□□□ 0.41
CLK3-207ENST00000562389 GPC5P78333 572 aa17.6■□□□□ 0.41
CLK3-207ENST00000562389 SLC7A9P82251 487 aa17.6■□□□□ 0.41
CLK3-207ENST00000562389 PFKPQ01813 784 aa17.6■□□□□ 0.41
CLK3-207ENST00000562389 USP4Q13107 963 aa17.6■□□□□ 0.41
CLK3-207ENST00000562389 HECTD3Q5T447 861 aa17.6■□□□□ 0.41
CLK3-207ENST00000562389 PMF1Q6P1K2 205 aa17.6■□□□□ 0.41
CLK3-207ENST00000562389 GPIHBP1Q8IV16 184 aa17.6■□□□□ 0.41
CLK3-207ENST00000562389 SCML4Q8N228 414 aa17.6■□□□□ 0.41
CLK3-207ENST00000562389 BPIFB1Q8TDL5 484 aa17.6■□□□□ 0.41
CLK3-207ENST00000562389 ASIC4Q96FT7 647 aa17.6■□□□□ 0.41
CLK3-207ENST00000562389 HSFY1Q96LI6 401 aa17.6■□□□□ 0.41
CLK3-207ENST00000562389 LRRC3BQ96PB8 259 aa17.6■□□□□ 0.41
CLK3-207ENST00000562389 LRRC4Q9HBW1 653 aa17.6■□□□□ 0.41
CLK3-207ENST00000562389 WNT16Q9UBV4 365 aa17.6■□□□□ 0.41
CLK3-207ENST00000562389 PCDHGC3Q9UN70 934 aa17.6■□□□□ 0.41
CLK3-207ENST00000562389 TICRRQ7Z2Z1 1910 aa17.59■□□□□ 0.41
CLK3-207ENST00000562389 A0A1W2PQH9 124 aa17.59■□□□□ 0.41
CLK3-207ENST00000562389 TMEM221A6NGB7 291 aa17.59■□□□□ 0.41
CLK3-207ENST00000562389 M0R296 226 aa17.59■□□□□ 0.41
CLK3-207ENST00000562389 CHADO15335 359 aa17.59■□□□□ 0.41
CLK3-207ENST00000562389 GPR37L1O60883 481 aa17.59■□□□□ 0.41
CLK3-207ENST00000562389 CFHP08603 1231 aa17.59■□□□□ 0.41
CLK3-207ENST00000562389 GPD2P43304 727 aa17.59■□□□□ 0.41
CLK3-207ENST00000562389 RPL34P49207 117 aaKnown RBP17.59■□□□□ 0.41
CLK3-207ENST00000562389 PGFP49763 221 aa17.59■□□□□ 0.41
CLK3-207ENST00000562389 ZNF445P59923 1031 aa17.59■□□□□ 0.41
CLK3-207ENST00000562389 FANCCQ00597 558 aa17.59■□□□□ 0.41
CLK3-207ENST00000562389 ADIGQ0VDE8 80 aa17.59■□□□□ 0.41
CLK3-207ENST00000562389 ZNF77Q15935 545 aa17.59■□□□□ 0.41
CLK3-207ENST00000562389 PM20D1Q6GTS8 502 aa17.59■□□□□ 0.41
CLK3-207ENST00000562389 DENND1BQ6P3S1 775 aa17.59■□□□□ 0.41
CLK3-207ENST00000562389 SLC47A2Q86VL8 602 aa17.59■□□□□ 0.41
CLK3-207ENST00000562389 YAF2Q8IY57 180 aa17.59■□□□□ 0.41
CLK3-207ENST00000562389 ARHGAP18Q8N392 663 aa17.59■□□□□ 0.41
CLK3-207ENST00000562389 DNASE1L2Q92874 299 aa17.59■□□□□ 0.41
CLK3-207ENST00000562389 NAP1L5Q96NT1 182 aaPredicted RBP17.59■□□□□ 0.41
CLK3-207ENST00000562389 ULBP1Q9BZM6 244 aa17.59■□□□□ 0.41
CLK3-207ENST00000562389 RNF38Q9H0F5 515 aa17.59■□□□□ 0.41
CLK3-207ENST00000562389 C11orf16Q9NQ32 467 aa17.59■□□□□ 0.41
CLK3-207ENST00000562389 CYLDQ9NQC7 956 aa17.59■□□□□ 0.41
CLK3-207ENST00000562389 CUL9Q8IWT3 2517 aa17.59■□□□□ 0.41
CLK3-207ENST00000562389 A0A1W2PQC6 194 aa17.58■□□□□ 0.4
CLK3-207ENST00000562389 ZNF263O14978 683 aa17.58■□□□□ 0.4
CLK3-207ENST00000562389 COCHO43405 550 aa17.58■□□□□ 0.4
CLK3-207ENST00000562389 TLR5O60602 858 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms