RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 SNX19Q92543 992 aa7.4□□□□□ -1.22
SMG1-204ENST00000561940 SNX27Q96L92 541 aa7.4□□□□□ -1.22
SMG1-204ENST00000561940 NECTIN3Q9NQS3 549 aa7.4□□□□□ -1.22
SMG1-204ENST00000561940 INTS13Q9NVM9 706 aa7.4□□□□□ -1.22
SMG1-204ENST00000561940 KCTD5Q9NXV2 234 aa7.4□□□□□ -1.22
SMG1-204ENST00000561940 DACT1Q9NYF0 836 aa7.4□□□□□ -1.22
SMG1-204ENST00000561940 DGKBQ9Y6T7 804 aa7.4□□□□□ -1.22
SMG1-204ENST00000561940 E7ENX8 843 aa7.39□□□□□ -1.23
SMG1-204ENST00000561940 F5H697 171 aa7.39□□□□□ -1.23
SMG1-204ENST00000561940 SYT5O00445 386 aa7.39□□□□□ -1.23
SMG1-204ENST00000561940 TLR5O60602 858 aa7.39□□□□□ -1.23
SMG1-204ENST00000561940 INMTO95050 263 aa7.39□□□□□ -1.23
SMG1-204ENST00000561940 LMNAP02545 664 aaKnown RBP7.39□□□□□ -1.23
SMG1-204ENST00000561940 CSF1RP07333 972 aa7.39□□□□□ -1.23
SMG1-204ENST00000561940 EGR1P18146 543 aa7.39□□□□□ -1.23
SMG1-204ENST00000561940 LRPAP1P30533 357 aa7.39□□□□□ -1.23
SMG1-204ENST00000561940 SERPINF1P36955 418 aa7.39□□□□□ -1.23
SMG1-204ENST00000561940 TAP2Q03519 686 aa7.39□□□□□ -1.23
SMG1-204ENST00000561940 SPATA5Q8NB90 893 aa7.39□□□□□ -1.23
SMG1-204ENST00000561940 ZNF384Q8TF68 577 aa7.39□□□□□ -1.23
SMG1-204ENST00000561940 PPP2R3CQ969Q6 453 aa7.39□□□□□ -1.23
SMG1-204ENST00000561940 PTDSS2Q9BVG9 487 aa7.39□□□□□ -1.23
SMG1-204ENST00000561940 SORBS1Q9BX66 1292 aaKnown RBP7.39□□□□□ -1.23
SMG1-204ENST00000561940 SYNPO2LQ9H987 977 aa7.39□□□□□ -1.23
SMG1-204ENST00000561940 SSX2IPQ9Y2D8 614 aa7.39□□□□□ -1.23
SMG1-204ENST00000561940 GPR52Q9Y2T5 361 aa7.39□□□□□ -1.23
SMG1-204ENST00000561940 NEU2Q9Y3R4 380 aa7.39□□□□□ -1.23
SMG1-204ENST00000561940 YY2O15391 372 aa7.38□□□□□ -1.23
SMG1-204ENST00000561940 ASNA1O43681 348 aa7.38□□□□□ -1.23
SMG1-204ENST00000561940 PEX1O43933 1283 aa7.38□□□□□ -1.23
SMG1-204ENST00000561940 PPP3CBP16298 524 aa7.38□□□□□ -1.23
SMG1-204ENST00000561940 MST1P26927 711 aa7.38□□□□□ -1.23
SMG1-204ENST00000561940 ADORA2AP29274 412 aa7.38□□□□□ -1.23
SMG1-204ENST00000561940 PTH2RP49190 550 aa7.38□□□□□ -1.23
SMG1-204ENST00000561940 HNRNPMP52272 730 aaKnown RBP eCLIP7.38□□□□□ -1.23
SMG1-204ENST00000561940 PRKAG1P54619 331 aa7.38□□□□□ -1.23
SMG1-204ENST00000561940 INHBEP58166 350 aa7.38□□□□□ -1.23
SMG1-204ENST00000561940 SP2Q02086 613 aa7.38□□□□□ -1.23
SMG1-204ENST00000561940 SMN1Q16637 294 aaKnown RBP7.38□□□□□ -1.23
SMG1-204ENST00000561940 HSP90AB4PQ58FF6 505 aa7.38□□□□□ -1.23
SMG1-204ENST00000561940 SUGP1Q8IWZ8 645 aaKnown RBP7.38□□□□□ -1.23
SMG1-204ENST00000561940 LNX2Q8N448 690 aa7.38□□□□□ -1.23
SMG1-204ENST00000561940 FAM71BQ8TC56 605 aa7.38□□□□□ -1.23
SMG1-204ENST00000561940 FBXL20Q96IG2 436 aa7.38□□□□□ -1.23
SMG1-204ENST00000561940 RIOX1Q9H6W3 641 aa7.38□□□□□ -1.23
SMG1-204ENST00000561940 GBA2Q9HCG7 927 aaPredicted RBP7.38□□□□□ -1.23
SMG1-204ENST00000561940 SAGE1Q9NXZ1 904 aa7.38□□□□□ -1.23
SMG1-204ENST00000561940 LRIT1Q9P2V4 623 aa7.38□□□□□ -1.23
SMG1-204ENST00000561940 SERTAD3Q9UJW9 196 aa7.38□□□□□ -1.23
SMG1-204ENST00000561940 HPSEQ9Y251 543 aa7.38□□□□□ -1.23
SMG1-204ENST00000561940 RGS10O43665 173 aa7.37□□□□□ -1.23
SMG1-204ENST00000561940 ERBB2P04626 1255 aa7.37□□□□□ -1.23
SMG1-204ENST00000561940 HGFP14210 728 aa7.37□□□□□ -1.23
SMG1-204ENST00000561940 CD6P30203 668 aa7.37□□□□□ -1.23
SMG1-204ENST00000561940 MRPS35P82673 323 aaKnown RBP7.37□□□□□ -1.23
SMG1-204ENST00000561940 PTK2BQ14289 1009 aa7.37□□□□□ -1.23
SMG1-204ENST00000561940 POSTNQ15063 836 aa7.37□□□□□ -1.23
SMG1-204ENST00000561940 MANEALQ5VSG8 457 aa7.37□□□□□ -1.23
SMG1-204ENST00000561940 JMJD6Q6NYC1 403 aaPredicted RBP7.37□□□□□ -1.23
SMG1-204ENST00000561940 MICALCLQ6ZW33 695 aa7.37□□□□□ -1.23
SMG1-204ENST00000561940 TFAP2BQ92481 460 aa7.37□□□□□ -1.23
SMG1-204ENST00000561940 TBC1D20Q96BZ9 403 aa7.37□□□□□ -1.23
SMG1-204ENST00000561940 TMEM120AQ9BXJ8 343 aa7.37□□□□□ -1.23
SMG1-204ENST00000561940 SPATA31A3Q5VYP0 1347 aa7.36□□□□□ -1.23
SMG1-204ENST00000561940 A0A0B4J269 797 aa7.36□□□□□ -1.23
SMG1-204ENST00000561940 AQP7P3A6NL99 342 aa7.36□□□□□ -1.23
SMG1-204ENST00000561940 AGPSO00116 658 aa7.36□□□□□ -1.23
SMG1-204ENST00000561940 SOAT2O75908 522 aa7.36□□□□□ -1.23
SMG1-204ENST00000561940 CHRM2P08172 466 aa7.36□□□□□ -1.23
SMG1-204ENST00000561940 PDHA1P08559 390 aa7.36□□□□□ -1.23
SMG1-204ENST00000561940 ARP10275 920 aa7.36□□□□□ -1.23
SMG1-204ENST00000561940 NTSR1P30989 418 aa7.36□□□□□ -1.23
SMG1-204ENST00000561940 SATB1Q01826 763 aa7.36□□□□□ -1.23
SMG1-204ENST00000561940 TUBB3Q13509 450 aa7.36□□□□□ -1.23
SMG1-204ENST00000561940 HLXQ14774 488 aaPredicted RBP7.36□□□□□ -1.23
SMG1-204ENST00000561940 MAPKAPK3Q16644 382 aa7.36□□□□□ -1.23
SMG1-204ENST00000561940 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.36□□□□□ -1.23
SMG1-204ENST00000561940 FAXCQ5TGI0 409 aa7.36□□□□□ -1.23
SMG1-204ENST00000561940 VWA1Q6PCB0 445 aa7.36□□□□□ -1.23
SMG1-204ENST00000561940 FAM109AQ8N4B1 249 aa7.36□□□□□ -1.23
SMG1-204ENST00000561940 B3GALNT2Q8NCR0 500 aa7.36□□□□□ -1.23
SMG1-204ENST00000561940 OR1N1Q8NGS0 311 aa7.36□□□□□ -1.23
SMG1-204ENST00000561940 MYCBPAPQ8TBZ2 947 aa7.36□□□□□ -1.23
SMG1-204ENST00000561940 ACTRT2Q8TDY3 377 aa7.36□□□□□ -1.23
SMG1-204ENST00000561940 SMCR8Q8TEV9 937 aaPredicted RBP7.36□□□□□ -1.23
SMG1-204ENST00000561940 LTV1Q96GA3 475 aaPredicted RBP7.36□□□□□ -1.23
SMG1-204ENST00000561940 PRPF18Q99633 342 aaKnown RBP7.36□□□□□ -1.23
SMG1-204ENST00000561940 SLC25A32Q9H2D1 315 aa7.36□□□□□ -1.23
SMG1-204ENST00000561940 NPHP1O15259 732 aa7.35□□□□□ -1.23
SMG1-204ENST00000561940 CD3EAPO15446 510 aaKnown RBP7.35□□□□□ -1.23
SMG1-204ENST00000561940 ITGA5P08648 1049 aa7.35□□□□□ -1.23
SMG1-204ENST00000561940 SRGNP10124 158 aa7.35□□□□□ -1.23
SMG1-204ENST00000561940 IDEP14735 1019 aa7.35□□□□□ -1.23
SMG1-204ENST00000561940 PPIFP30405 207 aaKnown RBP7.35□□□□□ -1.23
SMG1-204ENST00000561940 FOLR3P41439 243 aa7.35□□□□□ -1.23
SMG1-204ENST00000561940 CLK3P49761 638 aaKnown RBP7.35□□□□□ -1.23
SMG1-204ENST00000561940 BIRC3Q13489 604 aa7.35□□□□□ -1.23
SMG1-204ENST00000561940 ZNF169Q14929 603 aaPredicted RBP7.35□□□□□ -1.23
SMG1-204ENST00000561940 SLC5A9Q2M3M2 681 aa7.35□□□□□ -1.23
SMG1-204ENST00000561940 USP17L6PQ6QN14 398 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms