RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 XPR1Q9UBH6 696 aa4.42□□□□□ -1.7
HERC1-215ENST00000561436 HESX1Q9UBX0 185 aa4.42□□□□□ -1.7
HERC1-215ENST00000561436 CROCC2H7BZ55 1655 aa4.41□□□□□ -1.7
HERC1-215ENST00000561436 A0A1B0GTW7 788 aa4.41□□□□□ -1.7
HERC1-215ENST00000561436 LOC102723971A0A1B0GUV8 181 aa4.41□□□□□ -1.7
HERC1-215ENST00000561436 A0A1W2PPC4 97 aa4.41□□□□□ -1.7
HERC1-215ENST00000561436 hCG_1642624A0A1W2PR95 340 aa4.41□□□□□ -1.7
HERC1-215ENST00000561436 HNRNPDLO14979 420 aaKnown RBP4.41□□□□□ -1.7
HERC1-215ENST00000561436 ADAMTS3O15072 1205 aa4.41□□□□□ -1.7
HERC1-215ENST00000561436 NCK2O43639 380 aa4.41□□□□□ -1.7
HERC1-215ENST00000561436 FGF18O76093 207 aa4.41□□□□□ -1.7
HERC1-215ENST00000561436 GPANK1O95872 356 aa4.41□□□□□ -1.7
HERC1-215ENST00000561436 MYL4P12829 197 aa4.41□□□□□ -1.7
HERC1-215ENST00000561436 LAG3P18627 525 aa4.41□□□□□ -1.7
HERC1-215ENST00000561436 ABCB4P21439 1286 aa4.41□□□□□ -1.7
HERC1-215ENST00000561436 FGFR2P21802 821 aa4.41□□□□□ -1.7
HERC1-215ENST00000561436 PTGS2P35354 604 aa4.41□□□□□ -1.7
HERC1-215ENST00000561436 PPM1AP35813 382 aa4.41□□□□□ -1.7
HERC1-215ENST00000561436 PLA2G5P39877 138 aa4.41□□□□□ -1.7
HERC1-215ENST00000561436 HSD11B2P80365 405 aa4.41□□□□□ -1.7
HERC1-215ENST00000561436 KRT17Q04695 432 aa4.41□□□□□ -1.7
HERC1-215ENST00000561436 ICA1Q05084 483 aa4.41□□□□□ -1.7
HERC1-215ENST00000561436 TCF15Q12870 199 aa4.41□□□□□ -1.7
HERC1-215ENST00000561436 RESTQ13127 1097 aa4.41□□□□□ -1.7
HERC1-215ENST00000561436 PMS2P11Q13670 270 aa4.41□□□□□ -1.7
HERC1-215ENST00000561436 BEAN1Q3B7T3 259 aa4.41□□□□□ -1.7
HERC1-215ENST00000561436 MGAT5BQ3V5L5 792 aa4.41□□□□□ -1.7
HERC1-215ENST00000561436 NOMO2Q5JPE7 1267 aa4.41□□□□□ -1.7
HERC1-215ENST00000561436 ANO1Q5XXA6 986 aa4.41□□□□□ -1.7
HERC1-215ENST00000561436 HIBCHQ6NVY1 386 aaPredicted RBP4.41□□□□□ -1.7
HERC1-215ENST00000561436 ARMC6Q6NXE6 501 aa4.41□□□□□ -1.7
HERC1-215ENST00000561436 FBXO38Q6PIJ6 1188 aa4.41□□□□□ -1.7
HERC1-215ENST00000561436 UNC13DQ70J99 1090 aa4.41□□□□□ -1.7
HERC1-215ENST00000561436 CLNKQ7Z7G1 428 aa4.41□□□□□ -1.7
HERC1-215ENST00000561436 MICU3Q86XE3 530 aa4.41□□□□□ -1.7
HERC1-215ENST00000561436 CERS3Q8IU89 383 aa4.41□□□□□ -1.7
HERC1-215ENST00000561436 CFAP52Q8N1V2 620 aa4.41□□□□□ -1.7
HERC1-215ENST00000561436 BEND2Q8NDZ0 799 aa4.41□□□□□ -1.7
HERC1-215ENST00000561436 NGDNQ8NEJ9 315 aaKnown RBP4.41□□□□□ -1.7
HERC1-215ENST00000561436 POF1BQ8WVV4 589 aa4.41□□□□□ -1.7
HERC1-215ENST00000561436 ASB10Q8WXI3 467 aa4.41□□□□□ -1.7
HERC1-215ENST00000561436 MARS2Q96GW9 593 aaKnown RBP4.41□□□□□ -1.7
HERC1-215ENST00000561436 TLR10Q9BXR5 811 aa4.41□□□□□ -1.7
HERC1-215ENST00000561436 SLC46A2Q9BY10 475 aa4.41□□□□□ -1.7
HERC1-215ENST00000561436 MAGEB5Q9BZ81 275 aa4.41□□□□□ -1.7
HERC1-215ENST00000561436 MYO1AQ9UBC5 1043 aa4.41□□□□□ -1.7
HERC1-215ENST00000561436 FZD1Q9UP38 647 aa4.41□□□□□ -1.7
HERC1-215ENST00000561436 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.41□□□□□ -1.7
HERC1-215ENST00000561436 NOX1Q9Y5S8 564 aa4.41□□□□□ -1.7
HERC1-215ENST00000561436 RAD54BQ9Y620 910 aa4.41□□□□□ -1.7
HERC1-215ENST00000561436 HS3ST4Q9Y661 456 aa4.41□□□□□ -1.7
HERC1-215ENST00000561436 FPGT-TNNI3KV9GXZ4 949 aa4.41□□□□□ -1.7
HERC1-215ENST00000561436 NRXN3Q9Y4C0 1643 aa4.41□□□□□ -1.7
HERC1-215ENST00000561436 SETD1AO15047 1707 aaKnown RBP4.41□□□□□ -1.7
HERC1-215ENST00000561436 SPHKAPQ2M3C7 1700 aa4.41□□□□□ -1.7
HERC1-215ENST00000561436 MAP3K5Q99683 1374 aa4.4□□□□□ -1.7
HERC1-215ENST00000561436 GAGE12BA1L429 117 aa4.4□□□□□ -1.71
HERC1-215ENST00000561436 GAGE12HA6NDE8 117 aa4.4□□□□□ -1.71
HERC1-215ENST00000561436 E7ENX8 843 aa4.4□□□□□ -1.71
HERC1-215ENST00000561436 F8W8V4 182 aa4.4□□□□□ -1.71
HERC1-215ENST00000561436 RNASET2O00584 256 aaKnown RBP4.4□□□□□ -1.71
HERC1-215ENST00000561436 CCP110O43303 1012 aa4.4□□□□□ -1.71
HERC1-215ENST00000561436 PPFIA4O75335 1185 aa4.4□□□□□ -1.71
HERC1-215ENST00000561436 VPS4BO75351 444 aa4.4□□□□□ -1.71
HERC1-215ENST00000561436 SPDEFO95238 335 aa4.4□□□□□ -1.71
HERC1-215ENST00000561436 TXNP10599 105 aaKnown RBP4.4□□□□□ -1.71
HERC1-215ENST00000561436 HARSP12081 509 aaKnown RBP4.4□□□□□ -1.71
HERC1-215ENST00000561436 KCNA2P16389 499 aa4.4□□□□□ -1.71
HERC1-215ENST00000561436 FGFR4P22455 802 aa4.4□□□□□ -1.71
HERC1-215ENST00000561436 ACVR2AP27037 513 aa4.4□□□□□ -1.71
HERC1-215ENST00000561436 IL1R2P27930 398 aa4.4□□□□□ -1.71
HERC1-215ENST00000561436 LRPAP1P30533 357 aa4.4□□□□□ -1.71
HERC1-215ENST00000561436 LOXL3P58215 753 aa4.4□□□□□ -1.71
HERC1-215ENST00000561436 C1QTNF8P60827 252 aa4.4□□□□□ -1.71
HERC1-215ENST00000561436 TAP2Q03519 686 aa4.4□□□□□ -1.71
HERC1-215ENST00000561436 OCA2Q04671 838 aa4.4□□□□□ -1.71
HERC1-215ENST00000561436 SLFN5Q08AF3 891 aa4.4□□□□□ -1.71
HERC1-215ENST00000561436 SLC29A2Q14542 456 aa4.4□□□□□ -1.71
HERC1-215ENST00000561436 DHX8Q14562 1220 aaKnown RBP4.4□□□□□ -1.71
HERC1-215ENST00000561436 FAM83BQ5T0W9 1011 aa4.4□□□□□ -1.71
HERC1-215ENST00000561436 KLHDC7AQ5VTJ3 777 aa4.4□□□□□ -1.71
HERC1-215ENST00000561436 DCAF12L1Q5VU92 463 aa4.4□□□□□ -1.71
HERC1-215ENST00000561436 LAIR1Q6GTX8 287 aa4.4□□□□□ -1.71
HERC1-215ENST00000561436 PCSK4Q6UW60 755 aa4.4□□□□□ -1.71
HERC1-215ENST00000561436 PPP1R32Q7Z5V6 425 aa4.4□□□□□ -1.71
HERC1-215ENST00000561436 MAPKAPK5Q8IW41 473 aa4.4□□□□□ -1.71
HERC1-215ENST00000561436 PSD4Q8NDX1 1056 aa4.4□□□□□ -1.71
HERC1-215ENST00000561436 MAML1Q92585 1016 aa4.4□□□□□ -1.71
HERC1-215ENST00000561436 KIAA1191Q96A73 305 aa4.4□□□□□ -1.71
HERC1-215ENST00000561436 LENG9Q96B70 501 aa4.4□□□□□ -1.71
HERC1-215ENST00000561436 RNF31Q96EP0 1072 aa4.4□□□□□ -1.71
HERC1-215ENST00000561436 TMEM41AQ96HV5 264 aa4.4□□□□□ -1.71
HERC1-215ENST00000561436 SLC46A1Q96NT5 459 aa4.4□□□□□ -1.71
HERC1-215ENST00000561436 AGAP2Q99490 1192 aa4.4□□□□□ -1.71
HERC1-215ENST00000561436 CRB3Q9BUF7 120 aa4.4□□□□□ -1.71
HERC1-215ENST00000561436 TTYH3Q9C0H2 523 aa4.4□□□□□ -1.71
HERC1-215ENST00000561436 WDR12Q9GZL7 423 aaKnown RBP4.4□□□□□ -1.71
HERC1-215ENST00000561436 ZCWPW1Q9H0M4 648 aa4.4□□□□□ -1.71
HERC1-215ENST00000561436 VSX1Q9NZR4 365 aaPredicted RBP4.4□□□□□ -1.71
HERC1-215ENST00000561436 KCNE5Q9UJ90 142 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms